2021-06-04T00:30:42.1270238Z ##[section]Starting: Request a runner to run this job 2021-06-04T00:30:43.2626011Z Can't find any online and idle self-hosted runner in current repository that matches the required labels: 'ubuntu-20.04' 2021-06-04T00:30:43.3424104Z Can't find any online and idle self-hosted runner in current repository's organization/enterprise account that matches the required labels: 'ubuntu-20.04' 2021-06-04T00:30:43.4504507Z Found online and idle hosted runner in current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-06-04T00:30:43.5646640Z ##[section]Finishing: Request a runner to run this job 2021-06-04T00:30:50.5947178Z Current runner version: '2.278.0' 2021-06-04T00:30:50.5970549Z ##[group]Operating System 2021-06-04T00:30:50.5971382Z Ubuntu 2021-06-04T00:30:50.5971872Z 20.04.2 2021-06-04T00:30:50.5972273Z LTS 2021-06-04T00:30:50.5972752Z ##[endgroup] 2021-06-04T00:30:50.5973305Z ##[group]Virtual Environment 2021-06-04T00:30:50.5973948Z Environment: ubuntu-20.04 2021-06-04T00:30:50.5974532Z Version: 20210531.0 2021-06-04T00:30:50.5975479Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210531.0/images/linux/Ubuntu2004-README.md 2021-06-04T00:30:50.5976808Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210531.0 2021-06-04T00:30:50.5977693Z ##[endgroup] 2021-06-04T00:30:50.5979469Z ##[group]GITHUB_TOKEN Permissions 2021-06-04T00:30:50.5980603Z Actions: write 2021-06-04T00:30:50.5981173Z Checks: write 2021-06-04T00:30:50.5981652Z Contents: write 2021-06-04T00:30:50.5982201Z Deployments: write 2021-06-04T00:30:50.5982852Z Issues: write 2021-06-04T00:30:50.5983383Z Metadata: read 2021-06-04T00:30:50.5983926Z Packages: write 2021-06-04T00:30:50.5984443Z PullRequests: write 2021-06-04T00:30:50.5985080Z RepositoryProjects: write 2021-06-04T00:30:50.5985746Z SecurityEvents: write 2021-06-04T00:30:50.5986277Z Statuses: write 2021-06-04T00:30:50.5986900Z ##[endgroup] 2021-06-04T00:30:50.5989608Z Prepare workflow directory 2021-06-04T00:30:50.6932805Z Prepare all required actions 2021-06-04T00:30:50.6942962Z Getting action download info 2021-06-04T00:30:51.0751277Z Download action repository 'actions/checkout@v2' 2021-06-04T00:30:52.7809774Z Download action repository 'r-lib/actions@master' 2021-06-04T00:30:53.3505862Z Download action repository 'adigherman/actions@master' 2021-06-04T00:30:55.7431329Z Download action repository 'msys2/setup-msys2@v2' 2021-06-04T00:30:56.7816891Z Download action repository 'actions/cache@v1' 2021-06-04T00:30:56.9294223Z Download action repository 'actions/upload-artifact@master' 2021-06-04T00:30:57.0868185Z Download action repository 'actions/upload-release-asset@v1.0.1' 2021-06-04T00:30:57.4710003Z ##[group]Run actions/checkout@v2 2021-06-04T00:30:57.4710586Z with: 2021-06-04T00:30:57.4711080Z repository: neuroconductor/neuroCombat 2021-06-04T00:30:57.4711991Z token: *** 2021-06-04T00:30:57.4712375Z ssh-strict: true 2021-06-04T00:30:57.4712908Z persist-credentials: true 2021-06-04T00:30:57.4713415Z clean: true 2021-06-04T00:30:57.4713796Z fetch-depth: 1 2021-06-04T00:30:57.4714160Z lfs: false 2021-06-04T00:30:57.4714538Z submodules: false 2021-06-04T00:30:57.4714914Z env: 2021-06-04T00:30:57.4715324Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:30:57.4715791Z TIC_DEPLOY_KEY: 2021-06-04T00:30:57.4716548Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:30:57.4717656Z GITHUB_PAT: *** 2021-06-04T00:30:57.4718420Z COVERALLS_TOKEN: *** 2021-06-04T00:30:57.4718895Z continue-on-error: false 2021-06-04T00:30:57.4719588Z VDIFFR_RUN_TESTS: 2021-06-04T00:30:57.4719970Z ##[endgroup] 2021-06-04T00:30:57.6716415Z Syncing repository: neuroconductor/neuroCombat 2021-06-04T00:30:57.6717226Z ##[group]Getting Git version info 2021-06-04T00:30:57.6718219Z Working directory is '/home/runner/work/neuroCombat/neuroCombat' 2021-06-04T00:30:57.6788188Z [command]/usr/bin/git version 2021-06-04T00:30:57.6902002Z git version 2.31.1 2021-06-04T00:30:57.6922147Z ##[endgroup] 2021-06-04T00:30:57.6927068Z Deleting the contents of '/home/runner/work/neuroCombat/neuroCombat' 2021-06-04T00:30:57.6930864Z ##[group]Initializing the repository 2021-06-04T00:30:57.6934947Z [command]/usr/bin/git init /home/runner/work/neuroCombat/neuroCombat 2021-06-04T00:30:57.6996392Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-06-04T00:30:57.6997194Z hint: is subject to change. To configure the initial branch name to use in all 2021-06-04T00:30:57.6998091Z hint: of your new repositories, which will suppress this warning, call: 2021-06-04T00:30:57.6998652Z hint: 2021-06-04T00:30:57.6999679Z hint: git config --global init.defaultBranch 2021-06-04T00:30:57.7000209Z hint: 2021-06-04T00:30:57.7000891Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-06-04T00:30:57.7001829Z hint: 'development'. The just-created branch can be renamed via this command: 2021-06-04T00:30:57.7002411Z hint: 2021-06-04T00:30:57.7002897Z hint: git branch -m 2021-06-04T00:30:57.7013597Z Initialized empty Git repository in /home/runner/work/neuroCombat/neuroCombat/.git/ 2021-06-04T00:30:57.7023678Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/neuroCombat 2021-06-04T00:30:57.7068302Z ##[endgroup] 2021-06-04T00:30:57.7069276Z ##[group]Disabling automatic garbage collection 2021-06-04T00:30:57.7074375Z [command]/usr/bin/git config --local gc.auto 0 2021-06-04T00:30:57.7115911Z ##[endgroup] 2021-06-04T00:30:57.7121269Z ##[group]Setting up auth 2021-06-04T00:30:57.7129385Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-06-04T00:30:57.7166627Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-06-04T00:30:57.7510444Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-06-04T00:30:57.7548695Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-06-04T00:30:57.7755642Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-06-04T00:30:57.7804154Z ##[endgroup] 2021-06-04T00:30:57.7805121Z ##[group]Fetching the repository 2021-06-04T00:30:57.7813546Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +2e67eb42575120e830bdb4566176e8df5f96966f:refs/tags/1.0.13.s 2021-06-04T00:30:58.0165571Z remote: Enumerating objects: 43, done. 2021-06-04T00:30:58.0166428Z remote: Counting objects: 2% (1/43) 2021-06-04T00:30:58.0167021Z remote: Counting objects: 4% (2/43) 2021-06-04T00:30:58.0167610Z remote: Counting objects: 6% (3/43) 2021-06-04T00:30:58.0168182Z remote: Counting objects: 9% (4/43) 2021-06-04T00:30:58.0170488Z remote: Counting objects: 11% (5/43) 2021-06-04T00:30:58.0171104Z remote: Counting objects: 13% (6/43) 2021-06-04T00:30:58.0171691Z remote: Counting objects: 16% (7/43) 2021-06-04T00:30:58.0172273Z remote: Counting objects: 18% (8/43) 2021-06-04T00:30:58.0177556Z remote: Counting objects: 20% (9/43) 2021-06-04T00:30:58.0178157Z remote: Counting objects: 23% (10/43) 2021-06-04T00:30:58.0178747Z remote: Counting objects: 25% (11/43) 2021-06-04T00:30:58.0179317Z remote: Counting objects: 27% (12/43) 2021-06-04T00:30:58.0179916Z remote: Counting objects: 30% (13/43) 2021-06-04T00:30:58.0180488Z remote: Counting objects: 32% (14/43) 2021-06-04T00:30:58.0181061Z remote: Counting objects: 34% (15/43) 2021-06-04T00:30:58.0181643Z remote: Counting objects: 37% (16/43) 2021-06-04T00:30:58.0182204Z remote: Counting objects: 39% (17/43) 2021-06-04T00:30:58.0182782Z remote: Counting objects: 41% (18/43) 2021-06-04T00:30:58.0183347Z remote: Counting objects: 44% (19/43) 2021-06-04T00:30:58.0183928Z remote: Counting objects: 46% (20/43) 2021-06-04T00:30:58.0184505Z remote: Counting objects: 48% (21/43) 2021-06-04T00:30:58.0185069Z remote: Counting objects: 51% (22/43) 2021-06-04T00:30:58.0185644Z remote: Counting objects: 53% (23/43) 2021-06-04T00:30:58.0186216Z remote: Counting objects: 55% (24/43) 2021-06-04T00:30:58.0186780Z remote: Counting objects: 58% (25/43) 2021-06-04T00:30:58.0187354Z remote: Counting objects: 60% (26/43) 2021-06-04T00:30:58.0188101Z remote: Counting objects: 62% (27/43) 2021-06-04T00:30:58.0188678Z remote: Counting objects: 65% (28/43) 2021-06-04T00:30:58.0189257Z remote: Counting objects: 67% (29/43) 2021-06-04T00:30:58.0189819Z remote: Counting objects: 69% (30/43) 2021-06-04T00:30:58.0190392Z remote: Counting objects: 72% (31/43) 2021-06-04T00:30:58.0190956Z remote: Counting objects: 74% (32/43) 2021-06-04T00:30:58.0191533Z remote: Counting objects: 76% (33/43) 2021-06-04T00:30:58.0192106Z remote: Counting objects: 79% (34/43) 2021-06-04T00:30:58.0192676Z remote: Counting objects: 81% (35/43) 2021-06-04T00:30:58.0193253Z remote: Counting objects: 83% (36/43) 2021-06-04T00:30:58.0193830Z remote: Counting objects: 86% (37/43) 2021-06-04T00:30:58.0194396Z remote: Counting objects: 88% (38/43) 2021-06-04T00:30:58.0194970Z remote: Counting objects: 90% (39/43) 2021-06-04T00:30:58.0195541Z remote: Counting objects: 93% (40/43) 2021-06-04T00:30:58.0196117Z remote: Counting objects: 95% (41/43) 2021-06-04T00:30:58.0196694Z remote: Counting objects: 97% (42/43) 2021-06-04T00:30:58.0197256Z remote: Counting objects: 100% (43/43) 2021-06-04T00:30:58.0197860Z remote: Counting objects: 100% (43/43), done. 2021-06-04T00:30:58.0198490Z remote: Compressing objects: 2% (1/36) 2021-06-04T00:30:58.0199128Z remote: Compressing objects: 5% (2/36) 2021-06-04T00:30:58.0199951Z remote: Compressing objects: 8% (3/36) 2021-06-04T00:30:58.0200573Z remote: Compressing objects: 11% (4/36) 2021-06-04T00:30:58.0201195Z remote: Compressing objects: 13% (5/36) 2021-06-04T00:30:58.0201827Z remote: Compressing objects: 16% (6/36) 2021-06-04T00:30:58.0202444Z remote: Compressing objects: 19% (7/36) 2021-06-04T00:30:58.0203069Z remote: Compressing objects: 22% (8/36) 2021-06-04T00:30:58.0203687Z remote: Compressing objects: 25% (9/36) 2021-06-04T00:30:58.0204419Z remote: Compressing objects: 27% (10/36) 2021-06-04T00:30:58.0205144Z remote: Compressing objects: 30% (11/36) 2021-06-04T00:30:58.0205837Z remote: Compressing objects: 33% (12/36) 2021-06-04T00:30:58.0206387Z remote: Compressing objects: 36% (13/36) 2021-06-04T00:30:58.0206939Z remote: Compressing objects: 38% (14/36) 2021-06-04T00:30:58.0207474Z remote: Compressing objects: 41% (15/36) 2021-06-04T00:30:58.0208023Z remote: Compressing objects: 44% (16/36) 2021-06-04T00:30:58.0208560Z remote: Compressing objects: 47% (17/36) 2021-06-04T00:30:58.0209114Z remote: Compressing objects: 50% (18/36) 2021-06-04T00:30:58.0209662Z remote: Compressing objects: 52% (19/36) 2021-06-04T00:30:58.0210196Z remote: Compressing objects: 55% (20/36) 2021-06-04T00:30:58.0210916Z remote: Compressing objects: 58% (21/36) 2021-06-04T00:30:58.0214894Z remote: Compressing objects: 61% (22/36) 2021-06-04T00:30:58.0215504Z remote: Compressing objects: 63% (23/36) 2021-06-04T00:30:58.0216058Z remote: Compressing objects: 66% (24/36) 2021-06-04T00:30:58.0216611Z remote: Compressing objects: 69% (25/36) 2021-06-04T00:30:58.0217147Z remote: Compressing objects: 72% (26/36) 2021-06-04T00:30:58.0217697Z remote: Compressing objects: 75% (27/36) 2021-06-04T00:30:58.0218231Z remote: Compressing objects: 77% (28/36) 2021-06-04T00:30:58.0218786Z remote: Compressing objects: 80% (29/36) 2021-06-04T00:30:58.0219333Z remote: Compressing objects: 83% (30/36) 2021-06-04T00:30:58.0219867Z remote: Compressing objects: 86% (31/36) 2021-06-04T00:30:58.0220415Z remote: Compressing objects: 88% (32/36) 2021-06-04T00:30:58.0220963Z remote: Compressing objects: 91% (33/36) 2021-06-04T00:30:58.0221497Z remote: Compressing objects: 94% (34/36) 2021-06-04T00:30:58.0222086Z remote: Compressing objects: 97% (35/36) 2021-06-04T00:30:58.0222742Z remote: Compressing objects: 100% (36/36) 2021-06-04T00:30:58.0223315Z remote: Compressing objects: 100% (36/36), done. 2021-06-04T00:30:58.0487252Z remote: Total 43 (delta 4), reused 41 (delta 4), pack-reused 0 2021-06-04T00:30:58.1404853Z From https://github.com/neuroconductor/neuroCombat 2021-06-04T00:30:58.1406516Z * [new ref] 2e67eb42575120e830bdb4566176e8df5f96966f -> 1.0.13.s 2021-06-04T00:30:58.1407321Z ##[endgroup] 2021-06-04T00:30:58.1407934Z ##[group]Determining the checkout info 2021-06-04T00:30:58.1408505Z ##[endgroup] 2021-06-04T00:30:58.1409026Z ##[group]Checking out the ref 2021-06-04T00:30:58.1409908Z [command]/usr/bin/git checkout --progress --force refs/tags/1.0.13.s 2021-06-04T00:30:58.1410762Z Note: switching to 'refs/tags/1.0.13.s'. 2021-06-04T00:30:58.1411179Z 2021-06-04T00:30:58.1411971Z You are in 'detached HEAD' state. You can look around, make experimental 2021-06-04T00:30:58.1412879Z changes and commit them, and you can discard any commits you make in this 2021-06-04T00:30:58.1413702Z state without impacting any branches by switching back to a branch. 2021-06-04T00:30:58.1414224Z 2021-06-04T00:30:58.1414803Z If you want to create a new branch to retain commits you create, you may 2021-06-04T00:30:58.1415771Z do so (now or later) by using -c with the switch command. Example: 2021-06-04T00:30:58.1416265Z 2021-06-04T00:30:58.1416910Z git switch -c 2021-06-04T00:30:58.1417341Z 2021-06-04T00:30:58.1417797Z Or undo this operation with: 2021-06-04T00:30:58.1418188Z 2021-06-04T00:30:58.1418726Z git switch - 2021-06-04T00:30:58.1419070Z 2021-06-04T00:30:58.1419689Z Turn off this advice by setting config variable advice.detachedHead to false 2021-06-04T00:30:58.1420292Z 2021-06-04T00:30:58.1420727Z HEAD is now at 2e67eb4 Version id 201 stable 2021-06-04T00:30:58.1421185Z ##[endgroup] 2021-06-04T00:30:58.1421874Z [command]/usr/bin/git log -1 --format='%H' 2021-06-04T00:30:58.1422932Z '2e67eb42575120e830bdb4566176e8df5f96966f' 2021-06-04T00:30:58.1506778Z ##[group]Run r-lib/actions/setup-r@master 2021-06-04T00:30:58.1507228Z with: 2021-06-04T00:30:58.1507604Z r-version: release 2021-06-04T00:30:58.1507970Z Ncpus: 1 2021-06-04T00:30:58.1508366Z crayon.enabled: NULL 2021-06-04T00:30:58.1508881Z remove-openmp-macos: true 2021-06-04T00:30:58.1509406Z http-user-agent: default 2021-06-04T00:30:58.1509856Z install-r: true 2021-06-04T00:30:58.1510390Z windows-path-include-mingw: true 2021-06-04T00:30:58.1510972Z update-rtools: false 2021-06-04T00:30:58.1511355Z env: 2021-06-04T00:30:58.1511821Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:30:58.1512274Z TIC_DEPLOY_KEY: 2021-06-04T00:30:58.1513021Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:30:58.1514233Z GITHUB_PAT: *** 2021-06-04T00:30:58.1514984Z COVERALLS_TOKEN: *** 2021-06-04T00:30:58.1515467Z continue-on-error: false 2021-06-04T00:30:58.1515913Z VDIFFR_RUN_TESTS: 2021-06-04T00:30:58.1516300Z ##[endgroup] 2021-06-04T00:30:58.8179417Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-06-04T00:31:00.3251884Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-06-04T00:31:00.3263780Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-06-04T00:31:00.3267638Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-06-04T00:31:00.3643877Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [114 kB] 2021-06-04T00:31:00.4741523Z Get:5 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-06-04T00:31:00.4774976Z Get:6 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-06-04T00:31:00.5494132Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [1020 kB] 2021-06-04T00:31:00.5735964Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main Translation-en [228 kB] 2021-06-04T00:31:00.5772953Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [13.5 kB] 2021-06-04T00:31:00.5775156Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [255 kB] 2021-06-04T00:31:00.5798944Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted Translation-en [37.3 kB] 2021-06-04T00:31:00.5822159Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 c-n-f Metadata [456 B] 2021-06-04T00:31:00.5841018Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [779 kB] 2021-06-04T00:31:00.5896218Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [168 kB] 2021-06-04T00:31:00.5915937Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 c-n-f Metadata [17.6 kB] 2021-06-04T00:31:00.5925055Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/multiverse amd64 Packages [23.4 kB] 2021-06-04T00:31:00.5934523Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal-updates/multiverse Translation-en [5888 B] 2021-06-04T00:31:00.5936552Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal-updates/multiverse amd64 c-n-f Metadata [648 B] 2021-06-04T00:31:00.7195722Z Hit:19 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-06-04T00:31:00.7711865Z Get:20 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [691 kB] 2021-06-04T00:31:00.8353619Z Get:21 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [139 kB] 2021-06-04T00:31:00.8366890Z Get:22 http://security.ubuntu.com/ubuntu focal-security/main amd64 c-n-f Metadata [7780 B] 2021-06-04T00:31:00.8370675Z Get:23 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [227 kB] 2021-06-04T00:31:00.8395564Z Get:24 http://security.ubuntu.com/ubuntu focal-security/restricted Translation-en [33.3 kB] 2021-06-04T00:31:00.8402827Z Get:25 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 c-n-f Metadata [456 B] 2021-06-04T00:31:00.8406695Z Get:26 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [588 kB] 2021-06-04T00:31:00.8527424Z Get:27 http://security.ubuntu.com/ubuntu focal-security/universe Translation-en [94.6 kB] 2021-06-04T00:31:00.8538766Z Get:28 http://security.ubuntu.com/ubuntu focal-security/universe amd64 c-n-f Metadata [11.5 kB] 2021-06-04T00:31:00.8541488Z Get:29 http://security.ubuntu.com/ubuntu focal-security/multiverse amd64 Packages [19.9 kB] 2021-06-04T00:31:00.9054744Z Get:30 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [74.7 kB] 2021-06-04T00:31:05.4798535Z Fetched 4794 kB in 1s (5073 kB/s) 2021-06-04T00:31:06.1915634Z Reading package lists... 2021-06-04T00:31:06.2141492Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-06-04T00:31:07.7445356Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-06-04T00:31:07.8114186Z Reading package lists... 2021-06-04T00:31:07.9583518Z Building dependency tree... 2021-06-04T00:31:07.9587103Z Reading state information... 2021-06-04T00:31:08.0977643Z The following additional packages will be installed: 2021-06-04T00:31:08.0983175Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-06-04T00:31:08.0986736Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-06-04T00:31:08.0990462Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-06-04T00:31:08.0993717Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-06-04T00:31:08.0996931Z libconst-fast-perl libcontextual-return-perl libcpanel-json-xs-perl 2021-06-04T00:31:08.1000335Z libcroco3 libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-06-04T00:31:08.1003484Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-06-04T00:31:08.1006752Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-06-04T00:31:08.1010153Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-06-04T00:31:08.1014499Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-06-04T00:31:08.1019409Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-06-04T00:31:08.1023943Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-06-04T00:31:08.1028195Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-06-04T00:31:08.1032624Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-06-04T00:31:08.1036775Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-06-04T00:31:08.1040988Z liblist-someutils-perl liblist-someutils-xs-perl 2021-06-04T00:31:08.1045355Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-06-04T00:31:08.1049848Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-06-04T00:31:08.1053326Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-06-04T00:31:08.1056777Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-06-04T00:31:08.1060192Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-06-04T00:31:08.1083677Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-06-04T00:31:08.1085166Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-06-04T00:31:08.1086472Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-06-04T00:31:08.1087722Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-06-04T00:31:08.1089047Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-06-04T00:31:08.1090371Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-06-04T00:31:08.1091709Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-06-04T00:31:08.1093079Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-06-04T00:31:08.1094655Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-06-04T00:31:08.1096109Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-06-04T00:31:08.1097557Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-06-04T00:31:08.1098863Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-06-04T00:31:08.1100071Z libtype-tiny-perl libtype-tiny-xs-perl libunicode-utf8-perl 2021-06-04T00:31:08.1101346Z libvariable-magic-perl libwant-perl libxml-writer-perl libyaml-libyaml-perl 2021-06-04T00:31:08.1102572Z licensecheck lintian patchutils python3-gpg python3-magic python3-unidiff 2021-06-04T00:31:08.1103401Z python3-xdg t1utils wdiff 2021-06-04T00:31:08.1103863Z Suggested packages: 2021-06-04T00:31:08.1125240Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-06-04T00:31:08.1126419Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-06-04T00:31:08.1127616Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-06-04T00:31:08.1128790Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-06-04T00:31:08.1129956Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-06-04T00:31:08.1131032Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-06-04T00:31:08.1132112Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-06-04T00:31:08.1133349Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-06-04T00:31:08.1134772Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-06-04T00:31:08.1136023Z binutils-multiarch libtext-template-perl wdiff-doc 2021-06-04T00:31:08.1699781Z The following NEW packages will be installed: 2021-06-04T00:31:08.1704083Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-06-04T00:31:08.1705626Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-06-04T00:31:08.1707422Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-06-04T00:31:08.1710702Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-06-04T00:31:08.1712293Z libclone-perl libconst-fast-perl libcontextual-return-perl 2021-06-04T00:31:08.1713559Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-06-04T00:31:08.1715000Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-06-04T00:31:08.1716573Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-06-04T00:31:08.1717990Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-06-04T00:31:08.1719790Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-06-04T00:31:08.1721279Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-06-04T00:31:08.1722724Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-06-04T00:31:08.1724287Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-06-04T00:31:08.1725826Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-06-04T00:31:08.1731147Z libipc-run-perl libjson-maybexs-perl liblinux-epoll-perl 2021-06-04T00:31:08.1732404Z liblist-compare-perl liblist-moreutils-perl liblist-someutils-perl 2021-06-04T00:31:08.1733807Z liblist-someutils-xs-perl liblog-any-adapter-screen-perl liblog-any-perl 2021-06-04T00:31:08.1735243Z libmodule-implementation-perl libmodule-runtime-perl libmoo-perl 2021-06-04T00:31:08.1736568Z libmoox-aliases-perl libmoox-struct-perl libnamespace-clean-perl 2021-06-04T00:31:08.1737869Z libnet-dns-perl libnet-dns-sec-perl libnet-domain-tld-perl libnet-ip-perl 2021-06-04T00:31:08.1739148Z libnet-libidn-perl libnumber-compare-perl libnumber-range-perl 2021-06-04T00:31:08.1740408Z libobject-id-perl libpackage-stash-perl libpackage-stash-xs-perl 2021-06-04T00:31:08.1741738Z libparams-classify-perl libparams-util-perl libparams-validate-perl 2021-06-04T00:31:08.1743298Z libpath-iterator-rule-perl libpath-tiny-perl libperl4-corelibs-perl 2021-06-04T00:31:08.1744663Z libperlio-gzip-perl libpod-constants-perl libqpdf26 libre-engine-re2-perl 2021-06-04T00:31:08.1745856Z libreadonly-perl libref-util-perl libref-util-xs-perl 2021-06-04T00:31:08.1747143Z libregexp-pattern-license-perl libregexp-pattern-perl librole-tiny-perl 2021-06-04T00:31:08.1748497Z libsereal-decoder-perl libsereal-encoder-perl libsereal-perl 2021-06-04T00:31:08.1749696Z libsort-key-perl libsort-versions-perl libstrictures-perl 2021-06-04T00:31:08.1751006Z libstring-copyright-perl libstring-escape-perl libstring-shellquote-perl 2021-06-04T00:31:08.1752516Z libstruct-dumb-perl libsub-exporter-perl libsub-exporter-progressive-perl 2021-06-04T00:31:08.1753963Z libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl 2021-06-04T00:31:08.1755237Z libterm-readkey-perl libtest-fatal-perl libtest-refcount-perl 2021-06-04T00:31:08.1756460Z libtext-glob-perl libtext-levenshtein-perl libtype-tiny-perl 2021-06-04T00:31:08.1757709Z libtype-tiny-xs-perl libunicode-utf8-perl libvariable-magic-perl 2021-06-04T00:31:08.1758962Z libwant-perl libxml-writer-perl libyaml-libyaml-perl licensecheck lintian 2021-06-04T00:31:08.1760415Z patchutils python3-gpg python3-magic python3-unidiff python3-xdg qpdf 2021-06-04T00:31:08.1761059Z t1utils wdiff 2021-06-04T00:31:08.1907938Z 0 upgraded, 126 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:31:08.1908797Z Need to get 8451 kB of archives. 2021-06-04T00:31:08.1909500Z After this operation, 31.7 MB of additional disk space will be used. 2021-06-04T00:31:08.1911043Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-06-04T00:31:08.1954089Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-06-04T00:31:08.1962662Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-06-04T00:31:08.1977128Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-06-04T00:31:08.1992555Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-06-04T00:31:08.2014946Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-06-04T00:31:08.2026595Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-06-04T00:31:08.2037065Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-06-04T00:31:08.2067821Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-06-04T00:31:08.2073977Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-06-04T00:31:08.2075730Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-06-04T00:31:08.2077269Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-06-04T00:31:08.2086225Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-06-04T00:31:08.2088784Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-06-04T00:31:08.2093874Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-06-04T00:31:08.2103815Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-06-04T00:31:08.2115580Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-06-04T00:31:08.2137791Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-06-04T00:31:08.2152060Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-06-04T00:31:08.2375582Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-06-04T00:31:08.2383727Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-06-04T00:31:08.2422500Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-06-04T00:31:08.2437499Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-06-04T00:31:08.2472291Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-06-04T00:31:08.2495324Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-06-04T00:31:08.2767805Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-06-04T00:31:08.2787478Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-06-04T00:31:08.2806064Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-06-04T00:31:08.2828890Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-06-04T00:31:08.2839068Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-06-04T00:31:08.2849059Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-06-04T00:31:08.2856324Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-06-04T00:31:08.2862700Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-06-04T00:31:08.2888233Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-06-04T00:31:08.2902686Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-06-04T00:31:08.2922667Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-06-04T00:31:08.2933795Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-06-04T00:31:08.2942150Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-06-04T00:31:08.2949403Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-06-04T00:31:08.2956081Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-06-04T00:31:08.2962996Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-06-04T00:31:08.2972895Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-06-04T00:31:08.2981326Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-06-04T00:31:08.2990510Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-06-04T00:31:08.3008267Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-06-04T00:31:08.3051152Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-06-04T00:31:08.3059361Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-06-04T00:31:08.3071761Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-06-04T00:31:08.3117374Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-06-04T00:31:08.3196166Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-06-04T00:31:08.3269942Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-06-04T00:31:08.3281089Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-06-04T00:31:08.3289060Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-06-04T00:31:08.3301184Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-06-04T00:31:08.3308796Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-06-04T00:31:08.3314094Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-06-04T00:31:08.3320078Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-06-04T00:31:08.3325979Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-06-04T00:31:08.3332394Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-06-04T00:31:08.3498576Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-06-04T00:31:08.3529083Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-06-04T00:31:08.3531058Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-06-04T00:31:08.3546159Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-06-04T00:31:08.3547964Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-06-04T00:31:08.3568002Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-06-04T00:31:08.3569640Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-06-04T00:31:08.3584772Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-06-04T00:31:08.3606553Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-06-04T00:31:08.3612178Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-06-04T00:31:08.3618007Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-06-04T00:31:08.3626732Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-06-04T00:31:08.3633265Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-06-04T00:31:08.3641226Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-06-04T00:31:08.3658252Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-06-04T00:31:08.3735495Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-06-04T00:31:08.3759975Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-06-04T00:31:08.3768884Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-06-04T00:31:08.3775951Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-06-04T00:31:08.3842405Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-06-04T00:31:08.3850348Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-06-04T00:31:08.3857546Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-06-04T00:31:08.3863502Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-06-04T00:31:08.3900344Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-06-04T00:31:08.3916222Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-06-04T00:31:08.3925211Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-06-04T00:31:08.3936974Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-06-04T00:31:08.3942440Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-06-04T00:31:08.3953240Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-06-04T00:31:08.3966093Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-06-04T00:31:08.3978024Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-06-04T00:31:08.3988933Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-06-04T00:31:08.3993870Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-06-04T00:31:08.4003697Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-06-04T00:31:08.4017547Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-06-04T00:31:08.4028402Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-06-04T00:31:08.4034753Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-06-04T00:31:08.4043301Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqpdf26 amd64 9.1.1-1build1 [421 kB] 2021-06-04T00:31:08.4132665Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-06-04T00:31:08.4140066Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-06-04T00:31:08.4149857Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-06-04T00:31:08.4157415Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-06-04T00:31:08.4256578Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-06-04T00:31:08.4367639Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-06-04T00:31:08.4457847Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-06-04T00:31:08.4564870Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-06-04T00:31:08.4663071Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-06-04T00:31:08.4709872Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-06-04T00:31:08.4805875Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-06-04T00:31:08.4847540Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-06-04T00:31:08.4881736Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-06-04T00:31:08.4924176Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-06-04T00:31:08.5009810Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-06-04T00:31:08.5052146Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-06-04T00:31:08.5093668Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-06-04T00:31:08.5100267Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-06-04T00:31:08.5105472Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-06-04T00:31:08.5154024Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-06-04T00:31:08.5223614Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-06-04T00:31:08.5302749Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-06-04T00:31:08.5373330Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-06-04T00:31:08.5403345Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-06-04T00:31:08.5452393Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 lintian all 2.62.0 [980 kB] 2021-06-04T00:31:08.5933683Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-06-04T00:31:08.5971323Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-06-04T00:31:08.6044982Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qpdf amd64 9.1.1-1build1 [476 kB] 2021-06-04T00:31:08.6284014Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-06-04T00:31:09.3002410Z Fetched 8451 kB in 0s (18.7 MB/s) 2021-06-04T00:31:09.3320210Z Selecting previously unselected package dctrl-tools. 2021-06-04T00:31:09.3459337Z (Reading database ... 2021-06-04T00:31:09.3460105Z (Reading database ... 5% 2021-06-04T00:31:09.3460920Z (Reading database ... 10% 2021-06-04T00:31:09.3461381Z (Reading database ... 15% 2021-06-04T00:31:09.3461817Z (Reading database ... 20% 2021-06-04T00:31:09.3462322Z (Reading database ... 25% 2021-06-04T00:31:09.3462735Z (Reading database ... 30% 2021-06-04T00:31:09.3463162Z (Reading database ... 35% 2021-06-04T00:31:09.3463618Z (Reading database ... 40% 2021-06-04T00:31:09.3464053Z (Reading database ... 45% 2021-06-04T00:31:09.3464473Z (Reading database ... 50% 2021-06-04T00:31:09.3758021Z (Reading database ... 55% 2021-06-04T00:31:09.4016446Z (Reading database ... 60% 2021-06-04T00:31:09.4311055Z (Reading database ... 65% 2021-06-04T00:31:09.4652209Z (Reading database ... 70% 2021-06-04T00:31:09.5002742Z (Reading database ... 75% 2021-06-04T00:31:09.5359980Z (Reading database ... 80% 2021-06-04T00:31:09.6061749Z (Reading database ... 85% 2021-06-04T00:31:09.6458732Z (Reading database ... 90% 2021-06-04T00:31:09.7188782Z (Reading database ... 95% 2021-06-04T00:31:09.7189519Z (Reading database ... 100% 2021-06-04T00:31:09.7190281Z (Reading database ... 230729 files and directories currently installed.) 2021-06-04T00:31:09.7264519Z Preparing to unpack .../000-dctrl-tools_2.24-3_amd64.deb ... 2021-06-04T00:31:09.7387461Z Unpacking dctrl-tools (2.24-3) ... 2021-06-04T00:31:10.0081007Z Selecting previously unselected package libfile-which-perl. 2021-06-04T00:31:10.0244149Z Preparing to unpack .../001-libfile-which-perl_1.23-1_all.deb ... 2021-06-04T00:31:10.0254465Z Unpacking libfile-which-perl (1.23-1) ... 2021-06-04T00:31:10.0456802Z Selecting previously unselected package libfile-homedir-perl. 2021-06-04T00:31:10.0686278Z Preparing to unpack .../002-libfile-homedir-perl_1.004-1_all.deb ... 2021-06-04T00:31:10.0697311Z Unpacking libfile-homedir-perl (1.004-1) ... 2021-06-04T00:31:10.0960856Z Selecting previously unselected package libio-pty-perl. 2021-06-04T00:31:10.1162125Z Preparing to unpack .../003-libio-pty-perl_1%3a1.12-1_amd64.deb ... 2021-06-04T00:31:10.1175119Z Unpacking libio-pty-perl (1:1.12-1) ... 2021-06-04T00:31:10.1392191Z Selecting previously unselected package libipc-run-perl. 2021-06-04T00:31:10.1616752Z Preparing to unpack .../004-libipc-run-perl_20180523.0-2_all.deb ... 2021-06-04T00:31:10.1629910Z Unpacking libipc-run-perl (20180523.0-2) ... 2021-06-04T00:31:10.1960886Z Selecting previously unselected package libclass-method-modifiers-perl. 2021-06-04T00:31:10.2128136Z Preparing to unpack .../005-libclass-method-modifiers-perl_2.13-1_all.deb ... 2021-06-04T00:31:10.2139328Z Unpacking libclass-method-modifiers-perl (2.13-1) ... 2021-06-04T00:31:10.2384536Z Selecting previously unselected package libb-hooks-op-check-perl. 2021-06-04T00:31:10.2578685Z Preparing to unpack .../006-libb-hooks-op-check-perl_0.22-1build2_amd64.deb ... 2021-06-04T00:31:10.2590778Z Unpacking 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libmodule-runtime-perl. 2021-06-04T00:31:10.4350821Z Preparing to unpack .../010-libmodule-runtime-perl_0.016-1_all.deb ... 2021-06-04T00:31:10.4359557Z Unpacking libmodule-runtime-perl (0.016-1) ... 2021-06-04T00:31:10.4551711Z Selecting previously unselected package libimport-into-perl. 2021-06-04T00:31:10.4776240Z Preparing to unpack .../011-libimport-into-perl_1.002005-1_all.deb ... 2021-06-04T00:31:10.4786937Z Unpacking libimport-into-perl (1.002005-1) ... 2021-06-04T00:31:10.4963135Z Selecting previously unselected package librole-tiny-perl. 2021-06-04T00:31:10.5187721Z Preparing to unpack .../012-librole-tiny-perl_2.001004-1_all.deb ... 2021-06-04T00:31:10.5195722Z Unpacking librole-tiny-perl (2.001004-1) ... 2021-06-04T00:31:10.5400467Z Selecting previously unselected package libstrictures-perl. 2021-06-04T00:31:10.5603081Z Preparing to unpack .../013-libstrictures-perl_2.000006-1_all.deb ... 2021-06-04T00:31:10.5612496Z Unpacking libstrictures-perl (2.000006-1) ... 2021-06-04T00:31:10.5840331Z Selecting previously unselected package libsub-quote-perl. 2021-06-04T00:31:10.6009579Z Preparing to unpack .../014-libsub-quote-perl_2.006006-1_all.deb ... 2021-06-04T00:31:10.6018447Z Unpacking libsub-quote-perl (2.006006-1) ... 2021-06-04T00:31:10.6231132Z Selecting previously unselected package libmoo-perl. 2021-06-04T00:31:10.6436065Z Preparing to unpack .../015-libmoo-perl_2.003006-1_all.deb ... 2021-06-04T00:31:10.6445176Z Unpacking libmoo-perl (2.003006-1) ... 2021-06-04T00:31:10.6721401Z Selecting previously unselected package patchutils. 2021-06-04T00:31:10.6871812Z Preparing to unpack .../016-patchutils_0.3.4-2_amd64.deb ... 2021-06-04T00:31:10.6888801Z Unpacking patchutils (0.3.4-2) ... 2021-06-04T00:31:10.7161331Z Selecting previously unselected package wdiff. 2021-06-04T00:31:10.7356757Z Preparing to unpack .../017-wdiff_1.2.2-2build1_amd64.deb ... 2021-06-04T00:31:10.7365121Z Unpacking wdiff (1.2.2-2build1) ... 2021-06-04T00:31:10.7667698Z Selecting previously unselected package devscripts. 2021-06-04T00:31:10.7832183Z Preparing to unpack .../018-devscripts_2.20.2ubuntu2_amd64.deb ... 2021-06-04T00:31:10.8084427Z Unpacking devscripts (2.20.2ubuntu2) ... 2021-06-04T00:31:10.9127246Z Selecting previously unselected package diffstat. 2021-06-04T00:31:10.9359451Z Preparing to unpack .../019-diffstat_1.63-1_amd64.deb ... 2021-06-04T00:31:10.9370062Z Unpacking diffstat (1.63-1) ... 2021-06-04T00:31:10.9640724Z Selecting previously unselected package python3-gpg. 2021-06-04T00:31:10.9804445Z Preparing to unpack .../020-python3-gpg_1.13.1-7ubuntu2_amd64.deb ... 2021-06-04T00:31:10.9813361Z Unpacking python3-gpg (1.13.1-7ubuntu2) ... 2021-06-04T00:31:11.0241044Z Selecting previously unselected package dput. 2021-06-04T00:31:11.0412013Z Preparing to unpack .../021-dput_1.0.3ubuntu1_all.deb ... 2021-06-04T00:31:11.0473398Z Unpacking dput (1.0.3ubuntu1) ... 2021-06-04T00:31:11.0801252Z Selecting previously unselected package gdebi-core. 2021-06-04T00:31:11.0965227Z Preparing to unpack .../022-gdebi-core_0.9.5.7+nmu3_all.deb ... 2021-06-04T00:31:11.0973547Z Unpacking gdebi-core (0.9.5.7+nmu3) ... 2021-06-04T00:31:11.2285223Z Selecting previously unselected package libcroco3:amd64. 2021-06-04T00:31:11.2511330Z Preparing to unpack .../023-libcroco3_0.6.13-1_amd64.deb ... 2021-06-04T00:31:11.2529275Z Unpacking libcroco3:amd64 (0.6.13-1) ... 2021-06-04T00:31:11.2838877Z Selecting previously unselected package gettext. 2021-06-04T00:31:11.3060834Z Preparing to unpack .../024-gettext_0.19.8.1-10build1_amd64.deb ... 2021-06-04T00:31:11.3062403Z Unpacking gettext (0.19.8.1-10build1) ... 2021-06-04T00:31:11.4023034Z Selecting previously unselected package intltool-debian. 2021-06-04T00:31:11.4251327Z Preparing to unpack .../025-intltool-debian_0.35.0+20060710.5_all.deb ... 2021-06-04T00:31:11.4260363Z Unpacking intltool-debian (0.35.0+20060710.5) ... 2021-06-04T00:31:11.4520489Z Selecting previously unselected package libapt-pkg-perl. 2021-06-04T00:31:11.4692733Z Preparing to unpack .../026-libapt-pkg-perl_0.1.36build3_amd64.deb ... 2021-06-04T00:31:11.4700139Z Unpacking libapt-pkg-perl (0.1.36build3) ... 2021-06-04T00:31:11.5000638Z Selecting previously unselected package libarchive-zip-perl. 2021-06-04T00:31:11.5183741Z Preparing to unpack .../027-libarchive-zip-perl_1.67-2_all.deb ... 2021-06-04T00:31:11.5191312Z Unpacking libarchive-zip-perl (1.67-2) ... 2021-06-04T00:31:11.7401786Z Selecting previously unselected package libarray-intspan-perl. 2021-06-04T00:31:11.7568171Z Preparing to unpack .../028-libarray-intspan-perl_2.003-1_all.deb ... 2021-06-04T00:31:11.7576292Z Unpacking libarray-intspan-perl (2.003-1) ... 2021-06-04T00:31:11.7800551Z Selecting previously unselected package libasync-mergepoint-perl. 2021-06-04T00:31:11.7995149Z Preparing to unpack .../029-libasync-mergepoint-perl_0.04-2_all.deb ... 2021-06-04T00:31:11.8004423Z Unpacking libasync-mergepoint-perl (0.04-2) ... 2021-06-04T00:31:11.8230664Z Selecting previously unselected package libmodule-implementation-perl. 2021-06-04T00:31:11.8421216Z Preparing to unpack .../030-libmodule-implementation-perl_0.09-1_all.deb ... 2021-06-04T00:31:11.8431341Z Unpacking libmodule-implementation-perl (0.09-1) ... 2021-06-04T00:31:11.8681322Z Selecting previously unselected package libsub-exporter-progressive-perl. 2021-06-04T00:31:11.8841587Z Preparing to unpack .../031-libsub-exporter-progressive-perl_0.001013-1_all.deb ... 2021-06-04T00:31:11.8850949Z Unpacking libsub-exporter-progressive-perl (0.001013-1) ... 2021-06-04T00:31:11.9080369Z Selecting previously unselected package libvariable-magic-perl. 2021-06-04T00:31:11.9252305Z Preparing to unpack .../032-libvariable-magic-perl_0.62-1build2_amd64.deb ... 2021-06-04T00:31:11.9260312Z Unpacking libvariable-magic-perl (0.62-1build2) ... 2021-06-04T00:31:11.9560446Z Selecting previously unselected package libb-hooks-endofscope-perl. 2021-06-04T00:31:11.9705241Z 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unselected package libparams-util-perl. 2021-06-04T00:31:12.1664237Z Preparing to unpack .../037-libparams-util-perl_1.07-3build5_amd64.deb ... 2021-06-04T00:31:12.1672653Z Unpacking libparams-util-perl (1.07-3build5) ... 2021-06-04T00:31:12.1920528Z Selecting previously unselected package libsub-install-perl. 2021-06-04T00:31:12.2087133Z Preparing to unpack .../038-libsub-install-perl_0.928-1_all.deb ... 2021-06-04T00:31:12.2095633Z Unpacking libsub-install-perl (0.928-1) ... 2021-06-04T00:31:12.2280254Z Selecting previously unselected package libdata-optlist-perl. 2021-06-04T00:31:12.2510537Z Preparing to unpack .../039-libdata-optlist-perl_0.110-1_all.deb ... 2021-06-04T00:31:12.2520542Z Unpacking libdata-optlist-perl (0.110-1) ... 2021-06-04T00:31:12.2801726Z Selecting previously unselected package libsub-exporter-perl. 2021-06-04T00:31:12.3022483Z Preparing to unpack .../040-libsub-exporter-perl_0.987-1_all.deb ... 2021-06-04T00:31:12.3031893Z Unpacking libsub-exporter-perl 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previously unselected package libnet-ip-perl. 2021-06-04T00:31:12.6525935Z Preparing to unpack .../048-libnet-ip-perl_1.26-2_all.deb ... 2021-06-04T00:31:12.6535354Z Unpacking libnet-ip-perl (1.26-2) ... 2021-06-04T00:31:12.6880664Z Selecting previously unselected package libnet-dns-perl. 2021-06-04T00:31:12.7026560Z Preparing to unpack .../049-libnet-dns-perl_1.22-1_all.deb ... 2021-06-04T00:31:12.7035388Z Unpacking libnet-dns-perl (1.22-1) ... 2021-06-04T00:31:12.7601739Z Selecting previously unselected package libnet-domain-tld-perl. 2021-06-04T00:31:12.7767636Z Preparing to unpack .../050-libnet-domain-tld-perl_1.75-1_all.deb ... 2021-06-04T00:31:12.7775997Z Unpacking libnet-domain-tld-perl (1.75-1) ... 2021-06-04T00:31:12.8081725Z Selecting previously unselected package libemail-valid-perl. 2021-06-04T00:31:12.8228726Z Preparing to unpack .../051-libemail-valid-perl_1.202-1_all.deb ... 2021-06-04T00:31:12.8237131Z Unpacking libemail-valid-perl (1.202-1) ... 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previously unselected package liblinux-epoll-perl. 2021-06-04T00:31:14.1578978Z Preparing to unpack .../078-liblinux-epoll-perl_0.017-1_amd64.deb ... 2021-06-04T00:31:14.1587989Z Unpacking liblinux-epoll-perl (0.017-1) ... 2021-06-04T00:31:14.1840778Z Selecting previously unselected package libio-async-loop-epoll-perl. 2021-06-04T00:31:14.2010130Z Preparing to unpack .../079-libio-async-loop-epoll-perl_0.20-1_all.deb ... 2021-06-04T00:31:14.2018448Z Unpacking libio-async-loop-epoll-perl (0.20-1) ... 2021-06-04T00:31:14.2268607Z Selecting previously unselected package libjson-maybexs-perl. 2021-06-04T00:31:14.2434610Z Preparing to unpack .../080-libjson-maybexs-perl_1.004000-1_all.deb ... 2021-06-04T00:31:14.2443754Z Unpacking libjson-maybexs-perl (1.004000-1) ... 2021-06-04T00:31:14.2720536Z Selecting previously unselected package liblist-compare-perl. 2021-06-04T00:31:14.2896757Z Preparing to unpack .../081-liblist-compare-perl_0.53-1_all.deb ... 2021-06-04T00:31:14.2904422Z Unpacking 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r-4.1.0 (1) ... 2021-06-04T00:31:37.4523442Z 2021-06-04T00:31:37.4524139Z 2021-06-04T00:31:37.4524772Z Reading state information... Done 2021-06-04T00:31:37.4704321Z [command]/usr/bin/sudo ln -sf /opt/R/4.1.0/bin/R /usr/local/bin/R 2021-06-04T00:31:37.4812161Z [command]/usr/bin/sudo ln -sf /opt/R/4.1.0/bin/Rscript /usr/local/bin/Rscript 2021-06-04T00:31:37.5108746Z ##[group]Run r-lib/actions/setup-tinytex@master 2021-06-04T00:31:37.5109238Z env: 2021-06-04T00:31:37.5109670Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:31:37.5110128Z TIC_DEPLOY_KEY: 2021-06-04T00:31:37.5110884Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:31:37.5112543Z GITHUB_PAT: *** 2021-06-04T00:31:37.5113309Z COVERALLS_TOKEN: *** 2021-06-04T00:31:37.5113773Z continue-on-error: false 2021-06-04T00:31:37.5114234Z VDIFFR_RUN_TESTS: 2021-06-04T00:31:37.5114703Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:31:37.5115122Z TZ: UTC 2021-06-04T00:31:37.5115506Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:31:37.5115893Z NOT_CRAN: true 2021-06-04T00:31:37.5116257Z ##[endgroup] 2021-06-04T00:31:37.5600834Z [command]sudo apt-get install -y texinfo 2021-06-04T00:31:37.8398727Z Reading package lists... 2021-06-04T00:31:37.9850958Z Building dependency tree... 2021-06-04T00:31:37.9864752Z Reading state information... 2021-06-04T00:31:38.1974484Z texinfo is already the newest version (6.7.0.dfsg.2-5). 2021-06-04T00:31:38.1980447Z 0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:31:38.4143109Z [command]sh /home/runner/work/_temp/install-unx.sh 2021-06-04T00:31:38.4283909Z --2021-06-04 00:31:38-- https://yihui.org/tinytex/TinyTeX-1.tar.gz 2021-06-04T00:31:38.4404510Z Resolving yihui.org (yihui.org)... 76.223.126.88 2021-06-04T00:31:38.4470997Z Connecting to yihui.org (yihui.org)|76.223.126.88|:443... connected. 2021-06-04T00:31:38.4735565Z HTTP request sent, awaiting response... 301 Moved Permanently 2021-06-04T00:31:38.4738051Z Location: https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu [following] 2021-06-04T00:31:38.4741706Z --2021-06-04 00:31:38-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-06-04T00:31:38.5444421Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-06-04T00:31:38.6034675Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-06-04T00:31:38.8062784Z HTTP request sent, awaiting response... 302 Found 2021-06-04T00:31:38.8070154Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1587/6s6tteapi4k7f57e/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=MLa2iPOdMfXdj1PbPUXMTLVRPnbzWdA4Hi8CVkcaptc%3D&st=2021-06-04T00%3A30%3A38Z&se=2021-06-04T00%3A36%3A38Z&sp=r [following] 2021-06-04T00:31:38.8074617Z --2021-06-04 00:31:38-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1587/6s6tteapi4k7f57e/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=MLa2iPOdMfXdj1PbPUXMTLVRPnbzWdA4Hi8CVkcaptc%3D&st=2021-06-04T00%3A30%3A38Z&se=2021-06-04T00%3A36%3A38Z&sp=r 2021-06-04T00:31:38.8284278Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-06-04T00:31:38.8873858Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-06-04T00:31:39.1575383Z HTTP request sent, awaiting response... 200 OK 2021-06-04T00:31:39.1577582Z Length: 67552518 (64M) [application/octet-stream] 2021-06-04T00:31:39.1579388Z Saving to: ‘TinyTeX.tar.gz’ 2021-06-04T00:31:39.7483160Z 2021-06-04T00:31:41.2881164Z 0K ........ ........ ........ ........ 49% 15.7M 2s 2021-06-04T00:31:42.4902584Z 32768K ........ ........ ........ ........ 99% 26.1M 0s 2021-06-04T00:31:42.4903858Z 65536K 100% 6.63M=3.3s 2021-06-04T00:31:42.4906760Z 2021-06-04T00:31:42.4908244Z 2021-06-04 00:31:42 (19.3 MB/s) - ‘TinyTeX.tar.gz’ saved [67552518/67552518] 2021-06-04T00:31:42.4908704Z 2021-06-04T00:31:44.2096480Z tlmgr: setting option sys_bin to /home/runner/bin. 2021-06-04T00:31:44.2097791Z tlmgr: updating /home/runner/.TinyTeX/tlpkg/texlive.tlpdb 2021-06-04T00:31:44.4834374Z ##[group]Run tlmgr update --self 2021-06-04T00:31:44.4834950Z tlmgr update --self 2021-06-04T00:31:44.4835803Z tlmgr install filecontents upquote courier courier-scaled biber biblatex collection-luatex ae thumbpdf grfext 2021-06-04T00:31:44.4836639Z tlmgr update --all 2021-06-04T00:31:44.4879923Z shell: /usr/bin/bash -e {0} 2021-06-04T00:31:44.4880320Z env: 2021-06-04T00:31:44.4880746Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:31:44.4881208Z TIC_DEPLOY_KEY: 2021-06-04T00:31:44.4881977Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:31:44.4883629Z GITHUB_PAT: *** 2021-06-04T00:31:44.4884403Z COVERALLS_TOKEN: *** 2021-06-04T00:31:44.4884881Z continue-on-error: false 2021-06-04T00:31:44.4885326Z VDIFFR_RUN_TESTS: 2021-06-04T00:31:44.4885805Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:31:44.4886224Z TZ: UTC 2021-06-04T00:31:44.4886613Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:31:44.4887069Z NOT_CRAN: true 2021-06-04T00:31:44.4887436Z ##[endgroup] 2021-06-04T00:31:45.8577256Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-06-04T00:31:45.8579107Z tlmgr: no self-updates for tlmgr available 2021-06-04T00:31:47.0664629Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-06-04T00:31:47.0666179Z [1/89, ??:??/??:??] install: addliga [1k] 2021-06-04T00:31:47.1549446Z [2/89, 00:00/00:00] install: ae [57k] 2021-06-04T00:31:47.2043818Z [3/89, 00:00/00:00] install: auto-pst-pdf-lua [3k] 2021-06-04T00:31:47.2449476Z [4/89, 00:00/00:00] install: 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[70/89, 00:05/00:05] install: placeat [4k] 2021-06-04T00:31:52.1345313Z [71/89, 00:05/00:05] install: plantuml [3k] 2021-06-04T00:31:52.1776833Z [72/89, 00:05/00:05] install: rsfs [55k] 2021-06-04T00:31:52.2248064Z [73/89, 00:05/00:05] install: selnolig [53k] 2021-06-04T00:31:52.2711252Z [74/89, 00:05/00:05] install: spelling [14k] 2021-06-04T00:31:52.3146843Z [75/89, 00:05/00:05] install: stricttex [2k] 2021-06-04T00:31:52.3561516Z [76/89, 00:05/00:05] install: texlive-common [1k] 2021-06-04T00:31:52.3967331Z [77/89, 00:05/00:05] install: texlive-en [1k] 2021-06-04T00:31:52.4395676Z [78/89, 00:05/00:05] install: texlive-msg-translations [144k] 2021-06-04T00:31:52.5170603Z [79/89, 00:05/00:05] install: thumbpdf.x86_64-linux [1k] 2021-06-04T00:31:52.5737626Z [80/89, 00:05/00:05] install: thumbpdf [19k] 2021-06-04T00:31:52.6196570Z [81/89, 00:05/00:05] install: tlshell.x86_64-linux [1k] 2021-06-04T00:31:52.6630424Z [82/89, 00:05/00:05] install: tlshell [29k] 2021-06-04T00:31:52.7087323Z [83/89, 00:05/00:05] install: typewriter [25k] 2021-06-04T00:31:52.7539591Z [84/89, 00:05/00:05] install: uninormalize [6k] 2021-06-04T00:31:52.7960572Z [85/89, 00:05/00:05] install: upquote [2k] 2021-06-04T00:31:52.8801567Z [86/89, 00:05/00:05] install: xdvi.x86_64-linux [530k] 2021-06-04T00:31:52.9706126Z [87/89, 00:05/00:05] install: xdvi [7k] 2021-06-04T00:31:53.0153559Z [88/89, 00:05/00:05] install: collection-basic [1k] 2021-06-04T00:31:53.0576116Z [89/89, 00:06/00:06] install: collection-luatex [1k] 2021-06-04T00:31:53.0747065Z running mktexlsr ... 2021-06-04T00:31:53.1469700Z done running mktexlsr. 2021-06-04T00:31:53.1740322Z running updmap-sys ... 2021-06-04T00:31:53.4146193Z done running updmap-sys. 2021-06-04T00:31:53.4147825Z regenerating fmtutil.cnf in /home/runner/.TinyTeX/texmf-dist 2021-06-04T00:31:53.4149704Z running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/tPwiqkWK8s/TyLjTJd1QB ... 2021-06-04T00:31:53.7650779Z done running fmtutil-sys --byfmt optex --no-error-if-no-engine=luajithbtex,luajittex,mfluajit --status-file=/tmp/tPwiqkWK8s/TyLjTJd1QB. 2021-06-04T00:31:53.7652412Z OK: optex.fmt/luatex 2021-06-04T00:31:53.7653586Z tlmgr: package log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr.log 2021-06-04T00:31:53.7654992Z tlmgr: command log updated: /home/runner/.TinyTeX/texmf-var/web2c/tlmgr-commands.log 2021-06-04T00:31:54.9456732Z tlmgr: package repository https://ctan.math.illinois.edu/systems/texlive/tlnet (verified) 2021-06-04T00:31:54.9458352Z tlmgr: no updates available 2021-06-04T00:31:55.0340816Z ##[group]Run r-lib/actions/setup-pandoc@master 2021-06-04T00:31:55.0341309Z with: 2021-06-04T00:31:55.0341699Z pandoc-version: 2.7.3 2021-06-04T00:31:55.0342089Z env: 2021-06-04T00:31:55.0342497Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:31:55.0342959Z TIC_DEPLOY_KEY: 2021-06-04T00:31:55.0343715Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:31:55.0345414Z GITHUB_PAT: *** 2021-06-04T00:31:55.0346186Z COVERALLS_TOKEN: *** 2021-06-04T00:31:55.0346666Z continue-on-error: false 2021-06-04T00:31:55.0347126Z VDIFFR_RUN_TESTS: 2021-06-04T00:31:55.0347599Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:31:55.0348016Z TZ: UTC 2021-06-04T00:31:55.0348408Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:31:55.0348819Z NOT_CRAN: true 2021-06-04T00:31:55.0349175Z ##[endgroup] 2021-06-04T00:31:55.3074794Z [command]sudo apt-get install -y gdebi-core 2021-06-04T00:31:55.3706813Z Reading package lists... 2021-06-04T00:31:55.5168481Z Building dependency tree... 2021-06-04T00:31:55.5185090Z Reading state information... 2021-06-04T00:31:55.7332377Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-06-04T00:31:55.7333721Z 0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:31:55.7367457Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-06-04T00:31:55.8447165Z 2021-06-04T00:31:55.8597137Z Reading package lists... 0% 2021-06-04T00:31:55.8597525Z 2021-06-04T00:31:55.8639860Z Reading package lists... 100% 2021-06-04T00:31:55.8640477Z 2021-06-04T00:31:55.8640891Z 2021-06-04T00:31:55.8641358Z Reading package lists... Done 2021-06-04T00:31:55.8641686Z 2021-06-04T00:31:55.8642152Z Building dependency tree... 0% 2021-06-04T00:31:55.8642477Z 2021-06-04T00:31:55.8898881Z Building dependency tree... 0% 2021-06-04T00:31:55.8899727Z 2021-06-04T00:31:55.8900422Z Building dependency tree... 50% 2021-06-04T00:31:55.8900961Z 2021-06-04T00:31:55.9999060Z Building dependency tree... 50% 2021-06-04T00:31:55.9999643Z 2021-06-04T00:31:56.0000177Z Building dependency tree 2021-06-04T00:31:56.0000538Z 2021-06-04T00:31:56.0001073Z Reading state information... 0% 2021-06-04T00:31:56.0001461Z 2021-06-04T00:31:56.1432200Z Reading state information... 0% 2021-06-04T00:31:56.1432658Z 2021-06-04T00:31:56.1432910Z 2021-06-04T00:31:56.1433469Z Reading state information... Done 2021-06-04T00:31:56.1433864Z 2021-06-04T00:31:56.1434394Z Reading state information... 0% 2021-06-04T00:31:56.1480909Z 2021-06-04T00:31:56.1481410Z Reading state information... 1% 2021-06-04T00:31:56.1516278Z 2021-06-04T00:31:56.1516772Z Reading state information... 3% 2021-06-04T00:31:56.1553839Z 2021-06-04T00:31:56.1554354Z Reading state information... 5% 2021-06-04T00:31:56.1590987Z 2021-06-04T00:31:56.1591516Z Reading state information... 7% 2021-06-04T00:31:56.1624783Z 2021-06-04T00:31:56.1625283Z Reading state information... 9% 2021-06-04T00:31:56.1659061Z 2021-06-04T00:31:56.1659585Z Reading state information... 11% 2021-06-04T00:31:56.1694773Z 2021-06-04T00:31:56.1695289Z Reading state information... 13% 2021-06-04T00:31:56.1728871Z 2021-06-04T00:31:56.1729388Z Reading state information... 15% 2021-06-04T00:31:56.1763553Z 2021-06-04T00:31:56.1764053Z Reading state information... 17% 2021-06-04T00:31:56.1801480Z 2021-06-04T00:31:56.1801976Z Reading state information... 19% 2021-06-04T00:31:56.1836047Z 2021-06-04T00:31:56.1836561Z Reading state information... 21% 2021-06-04T00:31:56.1869679Z 2021-06-04T00:31:56.1870209Z Reading state information... 23% 2021-06-04T00:31:56.1907057Z 2021-06-04T00:31:56.1907563Z Reading state information... 25% 2021-06-04T00:31:56.1947210Z 2021-06-04T00:31:56.1947714Z Reading state information... 27% 2021-06-04T00:31:56.1982693Z 2021-06-04T00:31:56.1983209Z Reading state information... 29% 2021-06-04T00:31:56.2020187Z 2021-06-04T00:31:56.2020711Z Reading state information... 31% 2021-06-04T00:31:56.2056769Z 2021-06-04T00:31:56.2057602Z Reading state information... 33% 2021-06-04T00:31:56.2089155Z 2021-06-04T00:31:56.2089662Z Reading state information... 35% 2021-06-04T00:31:56.2121632Z 2021-06-04T00:31:56.2122152Z Reading state information... 37% 2021-06-04T00:31:56.2159274Z 2021-06-04T00:31:56.2159800Z Reading state information... 39% 2021-06-04T00:31:56.2196659Z 2021-06-04T00:31:56.2197161Z Reading state information... 41% 2021-06-04T00:31:56.2230757Z 2021-06-04T00:31:56.2231263Z Reading state information... 43% 2021-06-04T00:31:56.2270083Z 2021-06-04T00:31:56.2270610Z Reading state information... 45% 2021-06-04T00:31:56.2327093Z 2021-06-04T00:31:56.2327623Z Reading state information... 47% 2021-06-04T00:31:56.2363521Z 2021-06-04T00:31:56.2364088Z Reading state information... 49% 2021-06-04T00:31:56.2400921Z 2021-06-04T00:31:56.2401426Z Reading state information... 51% 2021-06-04T00:31:56.2435842Z 2021-06-04T00:31:56.2436356Z Reading state information... 53% 2021-06-04T00:31:56.2470762Z 2021-06-04T00:31:56.2471301Z Reading state information... 55% 2021-06-04T00:31:56.2507497Z 2021-06-04T00:31:56.2508004Z Reading state information... 57% 2021-06-04T00:31:56.2543648Z 2021-06-04T00:31:56.2544152Z Reading state information... 59% 2021-06-04T00:31:56.2585645Z 2021-06-04T00:31:56.2586164Z Reading state information... 61% 2021-06-04T00:31:56.2621043Z 2021-06-04T00:31:56.2621572Z Reading state information... 63% 2021-06-04T00:31:56.2654136Z 2021-06-04T00:31:56.2654636Z Reading state information... 65% 2021-06-04T00:31:56.2686813Z 2021-06-04T00:31:56.2687317Z Reading state information... 67% 2021-06-04T00:31:56.2723262Z 2021-06-04T00:31:56.2723779Z Reading state information... 69% 2021-06-04T00:31:56.2769629Z 2021-06-04T00:31:56.2770161Z Reading state information... 71% 2021-06-04T00:31:56.2801256Z 2021-06-04T00:31:56.2801758Z Reading state information... 73% 2021-06-04T00:31:56.2834699Z 2021-06-04T00:31:56.2835209Z Reading state information... 75% 2021-06-04T00:31:56.2882197Z 2021-06-04T00:31:56.2882713Z Reading state information... 77% 2021-06-04T00:31:56.7975580Z 2021-06-04T00:31:56.7980587Z Reading state information... 79% 2021-06-04T00:31:56.7981133Z 2021-06-04T00:31:56.7981689Z Reading state information... 81% 2021-06-04T00:31:56.7982191Z 2021-06-04T00:31:56.7982741Z Reading state information... 83% 2021-06-04T00:31:56.7983247Z 2021-06-04T00:31:56.7983780Z Reading state information... 85% 2021-06-04T00:31:56.7984291Z 2021-06-04T00:31:56.7984837Z Reading state information... 87% 2021-06-04T00:31:56.7985335Z 2021-06-04T00:31:56.7985878Z Reading state information... 89% 2021-06-04T00:31:56.7986379Z 2021-06-04T00:31:56.7986912Z Reading state information... 91% 2021-06-04T00:31:56.7987418Z 2021-06-04T00:31:56.7987960Z Reading state information... 93% 2021-06-04T00:31:56.7988451Z 2021-06-04T00:31:56.7988997Z Reading state information... 95% 2021-06-04T00:31:56.7989501Z 2021-06-04T00:31:56.7990032Z Reading state information... 97% 2021-06-04T00:31:56.7990554Z 2021-06-04T00:31:56.7991105Z Reading state information... 99% 2021-06-04T00:31:56.7991870Z Selecting previously unselected package pandoc. 2021-06-04T00:31:56.7992822Z (Reading database ... 237841 files and directories currently installed.) 2021-06-04T00:31:56.7994349Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-06-04T00:31:56.7995234Z Unpacking pandoc (2.7.3-1) ... 2021-06-04T00:31:58.9302799Z Setting up pandoc (2.7.3-1) ... 2021-06-04T00:31:58.9324414Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:31:59.6319792Z 2021-06-04T00:31:59.6320731Z 2021-06-04T00:31:59.6321445Z Reading state information... Done 2021-06-04T00:31:59.6631420Z ##[group]Run git config user.name adigherman 2021-06-04T00:31:59.6632085Z git config user.name adigherman 2021-06-04T00:31:59.6632641Z git config user.email adig@jhu.edu 2021-06-04T00:31:59.6672673Z shell: /usr/bin/bash -e {0} 2021-06-04T00:31:59.6673066Z env: 2021-06-04T00:31:59.6673522Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:31:59.6673994Z TIC_DEPLOY_KEY: 2021-06-04T00:31:59.6674775Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:31:59.6676327Z GITHUB_PAT: *** 2021-06-04T00:31:59.6677201Z COVERALLS_TOKEN: *** 2021-06-04T00:31:59.6677687Z continue-on-error: false 2021-06-04T00:31:59.6678163Z VDIFFR_RUN_TESTS: 2021-06-04T00:31:59.6678631Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:31:59.6679078Z TZ: UTC 2021-06-04T00:31:59.6679651Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:31:59.6680057Z NOT_CRAN: true 2021-06-04T00:31:59.6680455Z ##[endgroup] 2021-06-04T00:31:59.7017986Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-06-04T00:31:59.7018585Z env: 2021-06-04T00:31:59.7019022Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:31:59.7019493Z TIC_DEPLOY_KEY: 2021-06-04T00:31:59.7020245Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:31:59.7021895Z GITHUB_PAT: *** 2021-06-04T00:31:59.7022777Z COVERALLS_TOKEN: *** 2021-06-04T00:31:59.7023243Z continue-on-error: false 2021-06-04T00:31:59.7023711Z VDIFFR_RUN_TESTS: 2021-06-04T00:31:59.7024181Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:31:59.7024599Z TZ: UTC 2021-06-04T00:31:59.7024977Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:31:59.7025369Z NOT_CRAN: true 2021-06-04T00:31:59.7025742Z ##[endgroup] 2021-06-04T00:31:59.9878364Z Reading package lists... 2021-06-04T00:32:00.1444031Z Building dependency tree... 2021-06-04T00:32:00.1460325Z Reading state information... 2021-06-04T00:32:00.2738861Z The following additional packages will be installed: 2021-06-04T00:32:00.2741664Z cmake-data libjsoncpp1 librhash0 2021-06-04T00:32:00.2747182Z Suggested packages: 2021-06-04T00:32:00.2747961Z cmake-doc ninja-build 2021-06-04T00:32:00.3197644Z The following NEW packages will be installed: 2021-06-04T00:32:00.3207454Z cmake cmake-data libjsoncpp1 librhash0 2021-06-04T00:32:00.3378355Z 0 upgraded, 4 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:00.3379076Z Need to get 5470 kB of archives. 2021-06-04T00:32:00.3379860Z After this operation, 28.3 MB of additional disk space will be used. 2021-06-04T00:32:00.3381627Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-06-04T00:32:00.3673761Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-06-04T00:32:00.3694272Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-06-04T00:32:00.3723035Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-06-04T00:32:00.8000362Z Fetched 5470 kB in 0s (55.9 MB/s) 2021-06-04T00:32:00.8345827Z Selecting previously unselected package cmake-data. 2021-06-04T00:32:00.8414613Z (Reading database ... 2021-06-04T00:32:00.8415380Z (Reading database ... 5% 2021-06-04T00:32:00.8416299Z (Reading database ... 10% 2021-06-04T00:32:00.8416835Z (Reading database ... 15% 2021-06-04T00:32:00.8417313Z (Reading database ... 20% 2021-06-04T00:32:00.8417843Z (Reading database ... 25% 2021-06-04T00:32:00.8418318Z (Reading database ... 30% 2021-06-04T00:32:00.8418778Z (Reading database ... 35% 2021-06-04T00:32:00.8419251Z (Reading database ... 40% 2021-06-04T00:32:00.8419714Z (Reading database ... 45% 2021-06-04T00:32:00.8420188Z (Reading database ... 50% 2021-06-04T00:32:00.8511293Z (Reading database ... 55% 2021-06-04T00:32:00.8556256Z (Reading database ... 60% 2021-06-04T00:32:00.8583819Z (Reading database ... 65% 2021-06-04T00:32:00.8644702Z (Reading database ... 70% 2021-06-04T00:32:00.8671809Z (Reading database ... 75% 2021-06-04T00:32:00.8700755Z (Reading database ... 80% 2021-06-04T00:32:00.9039626Z (Reading database ... 85% 2021-06-04T00:32:00.9095612Z (Reading database ... 90% 2021-06-04T00:32:00.9408798Z (Reading database ... 95% 2021-06-04T00:32:00.9409406Z (Reading database ... 100% 2021-06-04T00:32:00.9410267Z (Reading database ... 237848 files and directories currently installed.) 2021-06-04T00:32:00.9504109Z Preparing to unpack .../cmake-data_3.16.3-1ubuntu1_all.deb ... 2021-06-04T00:32:00.9702997Z Unpacking cmake-data (3.16.3-1ubuntu1) ... 2021-06-04T00:32:01.3806779Z Selecting previously unselected package libjsoncpp1:amd64. 2021-06-04T00:32:01.4062196Z Preparing to unpack .../libjsoncpp1_1.7.4-3.1ubuntu2_amd64.deb ... 2021-06-04T00:32:01.4075356Z Unpacking libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-06-04T00:32:01.4400469Z Selecting previously unselected package librhash0:amd64. 2021-06-04T00:32:01.4579134Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-06-04T00:32:01.4588238Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-06-04T00:32:01.4868558Z Selecting previously unselected package cmake. 2021-06-04T00:32:01.5109505Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-06-04T00:32:01.5120265Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-06-04T00:32:01.9022833Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-06-04T00:32:01.9041404Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-06-04T00:32:01.9485883Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-06-04T00:32:01.9502167Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-06-04T00:32:01.9528392Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:32:02.9654964Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:04.8773791Z Reading package lists... 2021-06-04T00:32:05.0134377Z Building dependency tree... 2021-06-04T00:32:05.0150864Z Reading state information... 2021-06-04T00:32:05.1490075Z Suggested packages: 2021-06-04T00:32:05.1492519Z libssh-doc 2021-06-04T00:32:05.1946511Z The following NEW packages will be installed: 2021-06-04T00:32:05.1951301Z libssh-dev 2021-06-04T00:32:05.2191599Z 0 upgraded, 1 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:05.2192799Z Need to get 219 kB of archives. 2021-06-04T00:32:05.2193507Z After this operation, 1127 kB of additional disk space will be used. 2021-06-04T00:32:05.2195259Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.1 [219 kB] 2021-06-04T00:32:05.5953681Z Fetched 219 kB in 0s (6084 kB/s) 2021-06-04T00:32:05.6215519Z Selecting previously unselected package libssh-dev:amd64. 2021-06-04T00:32:05.6282386Z (Reading database ... 2021-06-04T00:32:05.6283112Z (Reading database ... 5% 2021-06-04T00:32:05.6283776Z (Reading database ... 10% 2021-06-04T00:32:05.6284440Z (Reading database ... 15% 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and directories currently installed.) 2021-06-04T00:32:05.7305728Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.1_amd64.deb ... 2021-06-04T00:32:05.7314633Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-06-04T00:32:05.8013430Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-06-04T00:32:07.6276238Z Reading package lists... 2021-06-04T00:32:07.7648741Z Building dependency tree... 2021-06-04T00:32:07.7666230Z Reading state information... 2021-06-04T00:32:07.9466530Z The following NEW packages will be installed: 2021-06-04T00:32:07.9470434Z jags 2021-06-04T00:32:08.0662441Z 0 upgraded, 1 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:08.0663323Z Need to get 1562 kB of archives. 2021-06-04T00:32:08.0664140Z After this operation, 3615 kB of additional disk space will be used. 2021-06-04T00:32:08.0666136Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-06-04T00:32:08.7994187Z Fetched 1562 kB in 0s (6954 kB/s) 2021-06-04T00:32:08.7995471Z Selecting previously unselected package jags. 2021-06-04T00:32:08.7996300Z (Reading database ... 2021-06-04T00:32:08.7997056Z (Reading database ... 5% 2021-06-04T00:32:08.7997679Z (Reading database ... 10% 2021-06-04T00:32:08.7998281Z (Reading database ... 15% 2021-06-04T00:32:08.7998865Z (Reading database ... 20% 2021-06-04T00:32:08.7999647Z (Reading database ... 25% 2021-06-04T00:32:08.8000240Z (Reading database ... 30% 2021-06-04T00:32:08.8000970Z (Reading database ... 35% 2021-06-04T00:32:08.8001715Z (Reading database ... 40% 2021-06-04T00:32:08.8002313Z (Reading database ... 45% 2021-06-04T00:32:08.8002788Z (Reading database ... 50% 2021-06-04T00:32:08.8003267Z (Reading database ... 55% 2021-06-04T00:32:08.8003746Z (Reading database ... 60% 2021-06-04T00:32:08.8004214Z (Reading database ... 65% 2021-06-04T00:32:08.8004693Z (Reading database ... 70% 2021-06-04T00:32:08.8005162Z (Reading database ... 75% 2021-06-04T00:32:08.8005638Z (Reading database ... 80% 2021-06-04T00:32:08.8006122Z (Reading database ... 85% 2021-06-04T00:32:08.8006791Z (Reading database ... 90% 2021-06-04T00:32:08.8007275Z (Reading database ... 95% 2021-06-04T00:32:08.8007744Z (Reading database ... 100% 2021-06-04T00:32:08.8008480Z (Reading database ... 240651 files and directories currently installed.) 2021-06-04T00:32:08.8009875Z Preparing to unpack .../jags_4.3.0-3build1_amd64.deb ... 2021-06-04T00:32:08.8010619Z Unpacking jags (4.3.0-3build1) ... 2021-06-04T00:32:08.8147309Z Setting up jags (4.3.0-3build1) ... 2021-06-04T00:32:08.8230843Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:32:09.4714680Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:11.3076187Z Reading package lists... 2021-06-04T00:32:11.4480641Z Building dependency tree... 2021-06-04T00:32:11.4497379Z Reading state information... 2021-06-04T00:32:11.5849372Z The following additional packages will be installed: 2021-06-04T00:32:11.5852021Z libnode64 libuv1-dev 2021-06-04T00:32:11.6315762Z The following NEW packages will be installed: 2021-06-04T00:32:11.6319406Z libnode-dev libnode64 libuv1-dev 2021-06-04T00:32:11.6489540Z 0 upgraded, 3 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:11.6490449Z Need to get 6239 kB of archives. 2021-06-04T00:32:11.6491791Z After this operation, 24.9 MB of additional disk space will be used. 2021-06-04T00:32:11.6493615Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.1 [103 kB] 2021-06-04T00:32:11.6522730Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-06-04T00:32:11.6976556Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-06-04T00:32:12.0633891Z Fetched 6239 kB in 0s (96.2 MB/s) 2021-06-04T00:32:12.0921657Z Selecting previously unselected package libuv1-dev:amd64. 2021-06-04T00:32:12.0956845Z (Reading database ... 2021-06-04T00:32:12.0957498Z (Reading database ... 5% 2021-06-04T00:32:12.0958130Z (Reading database ... 10% 2021-06-04T00:32:12.0958712Z (Reading database ... 15% 2021-06-04T00:32:12.0961653Z (Reading database ... 20% 2021-06-04T00:32:12.0962177Z (Reading database ... 25% 2021-06-04T00:32:12.0962642Z (Reading database ... 30% 2021-06-04T00:32:12.0963123Z (Reading database ... 35% 2021-06-04T00:32:12.0963587Z (Reading database ... 40% 2021-06-04T00:32:12.0964061Z (Reading database ... 45% 2021-06-04T00:32:12.0964538Z (Reading database ... 50% 2021-06-04T00:32:12.1042400Z (Reading database ... 55% 2021-06-04T00:32:12.1084085Z (Reading database ... 60% 2021-06-04T00:32:12.1113279Z (Reading database ... 65% 2021-06-04T00:32:12.1168728Z (Reading database ... 70% 2021-06-04T00:32:12.1193612Z (Reading database ... 75% 2021-06-04T00:32:12.1221924Z (Reading database ... 80% 2021-06-04T00:32:12.1545896Z (Reading database ... 85% 2021-06-04T00:32:12.1599554Z (Reading database ... 90% 2021-06-04T00:32:12.1890313Z (Reading database ... 95% 2021-06-04T00:32:12.1891296Z (Reading database ... 100% 2021-06-04T00:32:12.1892288Z (Reading database ... 240791 files and directories currently installed.) 2021-06-04T00:32:12.1980783Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.1_amd64.deb ... 2021-06-04T00:32:12.1988653Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-06-04T00:32:12.2292219Z Selecting previously unselected package libnode64:amd64. 2021-06-04T00:32:12.2517447Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-06-04T00:32:12.2535428Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-06-04T00:32:12.8442594Z Selecting previously unselected package libnode-dev:amd64. 2021-06-04T00:32:12.8656591Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-06-04T00:32:12.8665716Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-06-04T00:32:12.9489368Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-06-04T00:32:12.9508774Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-06-04T00:32:12.9528778Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-06-04T00:32:12.9550773Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:14.8135926Z Reading package lists... 2021-06-04T00:32:14.9508509Z Building dependency tree... 2021-06-04T00:32:14.9525284Z Reading state information... 2021-06-04T00:32:15.0885181Z The following additional packages will be installed: 2021-06-04T00:32:15.0888670Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-06-04T00:32:15.0892832Z Suggested packages: 2021-06-04T00:32:15.0893593Z libfftw3-doc 2021-06-04T00:32:15.1350765Z The following NEW packages will be installed: 2021-06-04T00:32:15.1354396Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-06-04T00:32:15.1868530Z 0 upgraded, 5 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:15.1869317Z Need to get 3986 kB of archives. 2021-06-04T00:32:15.1870185Z After this operation, 22.4 MB of additional disk space will be used. 2021-06-04T00:32:15.1872194Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-06-04T00:32:15.2135558Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-06-04T00:32:15.2417137Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-06-04T00:32:15.2702019Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-06-04T00:32:15.2836901Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-06-04T00:32:15.7447316Z Fetched 3986 kB in 0s (17.0 MB/s) 2021-06-04T00:32:15.7721727Z Selecting previously unselected package libfftw3-long3:amd64. 2021-06-04T00:32:15.7782783Z (Reading database ... 2021-06-04T00:32:15.7783727Z (Reading database ... 5% 2021-06-04T00:32:15.7784254Z (Reading database ... 10% 2021-06-04T00:32:15.7784727Z (Reading database ... 15% 2021-06-04T00:32:15.7785258Z (Reading database ... 20% 2021-06-04T00:32:15.7785752Z (Reading database ... 25% 2021-06-04T00:32:15.7786228Z (Reading database ... 30% 2021-06-04T00:32:15.7786702Z (Reading database ... 35% 2021-06-04T00:32:15.7787159Z (Reading database ... 40% 2021-06-04T00:32:15.7787633Z (Reading database ... 45% 2021-06-04T00:32:15.7788092Z (Reading database ... 50% 2021-06-04T00:32:15.7859922Z (Reading database ... 55% 2021-06-04T00:32:15.7902591Z (Reading database ... 60% 2021-06-04T00:32:15.7931206Z (Reading database ... 65% 2021-06-04T00:32:15.7983220Z (Reading database ... 70% 2021-06-04T00:32:15.8008096Z (Reading database ... 75% 2021-06-04T00:32:15.8035718Z (Reading database ... 80% 2021-06-04T00:32:15.8365424Z (Reading database ... 85% 2021-06-04T00:32:15.8419430Z (Reading database ... 90% 2021-06-04T00:32:15.8714805Z (Reading database ... 95% 2021-06-04T00:32:15.8715852Z (Reading database ... 100% 2021-06-04T00:32:15.8716866Z (Reading database ... 240927 files and directories currently installed.) 2021-06-04T00:32:15.8806125Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-06-04T00:32:15.8820185Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-06-04T00:32:15.9295927Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-06-04T00:32:15.9527805Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-06-04T00:32:15.9536682Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-06-04T00:32:16.0361739Z Selecting previously unselected package libfftw3-single3:amd64. 2021-06-04T00:32:16.0561889Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-06-04T00:32:16.0572210Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-06-04T00:32:16.1440781Z Selecting previously unselected package libfftw3-bin. 2021-06-04T00:32:16.1632419Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-06-04T00:32:16.1639678Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-06-04T00:32:16.1920610Z Selecting previously unselected package libfftw3-dev:amd64. 2021-06-04T00:32:16.2100021Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-06-04T00:32:16.2107529Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-06-04T00:32:16.4669199Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-06-04T00:32:16.4688146Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-06-04T00:32:16.4704999Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-06-04T00:32:16.4723433Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-06-04T00:32:16.4740246Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-06-04T00:32:16.4758312Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:32:17.1774461Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:19.0539062Z Reading package lists... 2021-06-04T00:32:19.1923687Z Building dependency tree... 2021-06-04T00:32:19.1939866Z Reading state information... 2021-06-04T00:32:19.3265439Z The following additional packages will be installed: 2021-06-04T00:32:19.3267221Z libdcmtk14 2021-06-04T00:32:19.3733256Z The following NEW packages will be installed: 2021-06-04T00:32:19.3737606Z dcmtk libdcmtk14 2021-06-04T00:32:19.4086753Z 0 upgraded, 2 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:19.4087961Z Need to get 5546 kB of archives. 2021-06-04T00:32:19.4089248Z After this operation, 26.5 MB of additional disk space will be used. 2021-06-04T00:32:19.4091399Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-06-04T00:32:19.5798833Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-06-04T00:32:19.9756022Z Fetched 5546 kB in 0s (23.9 MB/s) 2021-06-04T00:32:20.0081931Z Selecting previously unselected package libdcmtk14. 2021-06-04T00:32:20.0118591Z (Reading database ... 2021-06-04T00:32:20.0119691Z (Reading database ... 5% 2021-06-04T00:32:20.0120184Z (Reading database ... 10% 2021-06-04T00:32:20.0120661Z (Reading database ... 15% 2021-06-04T00:32:20.0121124Z (Reading database ... 20% 2021-06-04T00:32:20.0121648Z (Reading database ... 25% 2021-06-04T00:32:20.0122113Z (Reading database ... 30% 2021-06-04T00:32:20.0122587Z (Reading database ... 35% 2021-06-04T00:32:20.0123057Z (Reading database ... 40% 2021-06-04T00:32:20.0123512Z (Reading database ... 45% 2021-06-04T00:32:20.0123982Z (Reading database ... 50% 2021-06-04T00:32:20.0213334Z (Reading database ... 55% 2021-06-04T00:32:20.0257050Z (Reading database ... 60% 2021-06-04T00:32:20.0289204Z (Reading database ... 65% 2021-06-04T00:32:20.0344727Z (Reading database ... 70% 2021-06-04T00:32:20.0370704Z (Reading database ... 75% 2021-06-04T00:32:20.0397709Z (Reading database ... 80% 2021-06-04T00:32:20.0733155Z (Reading database ... 85% 2021-06-04T00:32:20.0785684Z (Reading database ... 90% 2021-06-04T00:32:20.1078607Z (Reading database ... 95% 2021-06-04T00:32:20.1079417Z (Reading database ... 100% 2021-06-04T00:32:20.1080275Z (Reading database ... 241018 files and directories currently installed.) 2021-06-04T00:32:20.1166276Z Preparing to unpack .../libdcmtk14_3.6.4-2.1build2_amd64.deb ... 2021-06-04T00:32:20.1180766Z Unpacking libdcmtk14 (3.6.4-2.1build2) ... 2021-06-04T00:32:20.5761411Z Selecting previously unselected package dcmtk. 2021-06-04T00:32:20.5983587Z Preparing to unpack .../dcmtk_3.6.4-2.1build2_amd64.deb ... 2021-06-04T00:32:20.6030032Z Unpacking dcmtk (3.6.4-2.1build2) ... 2021-06-04T00:32:20.7303016Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-06-04T00:32:20.7328539Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-06-04T00:32:20.7440404Z Adding `dcmtk' group to system ... 2021-06-04T00:32:21.3020964Z Adding `dcmtk' user to system ... 2021-06-04T00:32:21.3023011Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-06-04T00:32:21.3029101Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:32:22.5407562Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:24.3918238Z Reading package lists... 2021-06-04T00:32:24.5287929Z Building dependency tree... 2021-06-04T00:32:24.5304301Z Reading state information... 2021-06-04T00:32:24.7418518Z libsecret-1-dev is already the newest version (0.20.3-0ubuntu1). 2021-06-04T00:32:24.7419982Z 0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:24.8014357Z Reading package lists... 2021-06-04T00:32:24.9405904Z Building dependency tree... 2021-06-04T00:32:24.9422053Z Reading state information... 2021-06-04T00:32:25.1680893Z libpng-dev is already the newest version (1.6.37-2). 2021-06-04T00:32:25.1682238Z libpng-dev set to manually installed. 2021-06-04T00:32:25.1683199Z 0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:25.2275214Z Reading package lists... 2021-06-04T00:32:25.3727256Z Building dependency tree... 2021-06-04T00:32:25.3744206Z Reading state information... 2021-06-04T00:32:25.5122772Z The following additional packages will be installed: 2021-06-04T00:32:25.5125126Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-06-04T00:32:25.5129171Z Suggested packages: 2021-06-04T00:32:25.5130646Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-06-04T00:32:25.5132412Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-06-04T00:32:25.5133744Z fonts-arphic-uming fonts-nanum 2021-06-04T00:32:25.5588652Z The following NEW packages will be installed: 2021-06-04T00:32:25.5590331Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-06-04T00:32:25.5595802Z libpoppler97 poppler-data 2021-06-04T00:32:25.5764045Z 0 upgraded, 6 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:25.5764788Z Need to get 2582 kB of archives. 2021-06-04T00:32:25.5765512Z After this operation, 16.7 MB of additional disk space will be used. 2021-06-04T00:32:25.5767546Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-06-04T00:32:25.5930504Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-06-04T00:32:25.5950621Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-06-04T00:32:25.6142728Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-06-04T00:32:25.6179794Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-06-04T00:32:25.6237353Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-06-04T00:32:25.9905990Z Fetched 2582 kB in 0s (43.1 MB/s) 2021-06-04T00:32:26.0241759Z Selecting previously unselected package poppler-data. 2021-06-04T00:32:26.0265373Z (Reading database ... 2021-06-04T00:32:26.0265877Z (Reading database ... 5% 2021-06-04T00:32:26.0266544Z (Reading database ... 10% 2021-06-04T00:32:26.0267115Z (Reading database ... 15% 2021-06-04T00:32:26.0267673Z (Reading database ... 20% 2021-06-04T00:32:26.0268429Z (Reading database ... 25% 2021-06-04T00:32:26.0269008Z (Reading database ... 30% 2021-06-04T00:32:26.0269555Z (Reading database ... 35% 2021-06-04T00:32:26.0270114Z (Reading database ... 40% 2021-06-04T00:32:26.0270682Z (Reading database ... 45% 2021-06-04T00:32:26.0271230Z (Reading database ... 50% 2021-06-04T00:32:26.0355617Z (Reading database ... 55% 2021-06-04T00:32:26.0398577Z (Reading database ... 60% 2021-06-04T00:32:26.0428929Z (Reading database ... 65% 2021-06-04T00:32:26.0482417Z (Reading database ... 70% 2021-06-04T00:32:26.0508105Z (Reading database ... 75% 2021-06-04T00:32:26.0536153Z (Reading database ... 80% 2021-06-04T00:32:26.0880856Z (Reading database ... 85% 2021-06-04T00:32:26.0936338Z (Reading database ... 90% 2021-06-04T00:32:26.1241359Z (Reading database ... 95% 2021-06-04T00:32:26.1242047Z (Reading database ... 100% 2021-06-04T00:32:26.1242886Z (Reading database ... 241253 files and directories currently installed.) 2021-06-04T00:32:26.1331528Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-06-04T00:32:26.1339537Z Unpacking poppler-data (0.4.9-2) ... 2021-06-04T00:32:26.3481489Z Selecting previously unselected package libopenjp2-7:amd64. 2021-06-04T00:32:26.3691111Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-06-04T00:32:26.3709541Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-06-04T00:32:26.4037666Z Selecting previously unselected package libpoppler97:amd64. 2021-06-04T00:32:26.4274978Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-06-04T00:32:26.4286490Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-06-04T00:32:26.5321980Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-06-04T00:32:26.5525844Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-06-04T00:32:26.5533423Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-06-04T00:32:26.5800538Z Selecting previously unselected package libpoppler-dev:amd64. 2021-06-04T00:32:26.5972792Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-06-04T00:32:26.5979923Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-06-04T00:32:26.6231820Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-06-04T00:32:26.6392396Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-06-04T00:32:26.6399072Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-06-04T00:32:26.6897738Z Setting up poppler-data (0.4.9-2) ... 2021-06-04T00:32:26.6960726Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-06-04T00:32:26.6986369Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-06-04T00:32:26.7008345Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-06-04T00:32:26.7026337Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-06-04T00:32:26.7043738Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-06-04T00:32:26.7064631Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-06-04T00:32:26.7911492Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:28.6471953Z Reading package lists... 2021-06-04T00:32:28.7872407Z Building dependency tree... 2021-06-04T00:32:28.7891731Z Reading state information... 2021-06-04T00:32:28.9218128Z The following additional packages will be installed: 2021-06-04T00:32:28.9221096Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-06-04T00:32:28.9225198Z Suggested packages: 2021-06-04T00:32:28.9226147Z libhdf5-doc 2021-06-04T00:32:28.9682450Z The following NEW packages will be installed: 2021-06-04T00:32:28.9686357Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-06-04T00:32:28.9688542Z libsz2 2021-06-04T00:32:29.0045924Z 0 upgraded, 7 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:29.0046694Z Need to get 4074 kB of archives. 2021-06-04T00:32:29.0047549Z After this operation, 17.6 MB of additional disk space will be used. 2021-06-04T00:32:29.0049812Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-06-04T00:32:29.0104367Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-06-04T00:32:29.0167248Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-06-04T00:32:29.0234252Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-06-04T00:32:29.0711526Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-06-04T00:32:29.0828279Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-06-04T00:32:29.0897729Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-06-04T00:32:29.5448394Z Fetched 4074 kB in 0s (20.2 MB/s) 2021-06-04T00:32:29.5711690Z Selecting previously unselected package hdf5-helpers. 2021-06-04T00:32:29.5779044Z (Reading database ... 2021-06-04T00:32:29.5782381Z (Reading database ... 5% 2021-06-04T00:32:29.5784054Z (Reading database ... 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2021-06-04T00:32:29.6740353Z (Reading database ... 241813 files and directories currently installed.) 2021-06-04T00:32:29.6828873Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-06-04T00:32:29.6837845Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-06-04T00:32:29.7120580Z Selecting previously unselected package libaec0:amd64. 2021-06-04T00:32:29.7275033Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-06-04T00:32:29.7290111Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-06-04T00:32:29.7560875Z Selecting previously unselected package libsz2:amd64. 2021-06-04T00:32:29.7721352Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-06-04T00:32:29.7730491Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-06-04T00:32:29.8001369Z Selecting previously unselected package libhdf5-103:amd64. 2021-06-04T00:32:29.8186814Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-06-04T00:32:29.8192948Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-06-04T00:32:29.9561475Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-06-04T00:32:29.9753228Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-06-04T00:32:29.9762444Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-06-04T00:32:30.0160756Z Selecting previously unselected package libaec-dev:amd64. 2021-06-04T00:32:30.0306444Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-06-04T00:32:30.0313462Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-06-04T00:32:30.0513974Z Selecting previously unselected package libhdf5-dev. 2021-06-04T00:32:30.0749064Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-06-04T00:32:30.0763598Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-06-04T00:32:30.3612666Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-06-04T00:32:30.3635530Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-06-04T00:32:30.3656116Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-06-04T00:32:30.3673586Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-06-04T00:32:30.3689968Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-06-04T00:32:30.3707724Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-06-04T00:32:30.3723774Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-06-04T00:32:30.3788380Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-06-04T00:32:30.3817523Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:32:31.0446436Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:32.9015231Z Reading package lists... 2021-06-04T00:32:33.0365987Z Building dependency tree... 2021-06-04T00:32:33.0382633Z Reading state information... 2021-06-04T00:32:33.1711697Z The following additional packages will be installed: 2021-06-04T00:32:33.1714127Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-06-04T00:32:33.2168338Z The following NEW packages will be installed: 2021-06-04T00:32:33.2173417Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-06-04T00:32:33.2177551Z mesa-common-dev 2021-06-04T00:32:33.2360942Z 0 upgraded, 6 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:33.2361629Z Need to get 1761 kB of archives. 2021-06-04T00:32:33.2362370Z After this operation, 5442 kB of additional disk space will be used. 2021-06-04T00:32:33.2363994Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.102-1ubuntu1~20.04.1 [126 kB] 2021-06-04T00:32:33.2411622Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-06-04T00:32:33.2418968Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-06-04T00:32:33.2432609Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-06-04T00:32:33.2480309Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-06-04T00:32:33.2518251Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 20.2.6-0ubuntu0.20.04.1 [1148 kB] 2021-06-04T00:32:33.6395512Z Fetched 1761 kB in 0s (34.0 MB/s) 2021-06-04T00:32:33.6654930Z Selecting previously unselected package libdrm-dev:amd64. 2021-06-04T00:32:33.6723004Z (Reading database ... 2021-06-04T00:32:33.6724025Z (Reading database ... 5% 2021-06-04T00:32:33.6724668Z (Reading database ... 10% 2021-06-04T00:32:33.6725248Z (Reading database ... 15% 2021-06-04T00:32:33.6725837Z (Reading database ... 20% 2021-06-04T00:32:33.6726422Z (Reading database ... 25% 2021-06-04T00:32:33.6727029Z (Reading database ... 30% 2021-06-04T00:32:33.6727621Z (Reading 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(2.4.102-1ubuntu1~20.04.1) ... 2021-06-04T00:32:33.8121624Z Selecting previously unselected package libglx-dev:amd64. 2021-06-04T00:32:33.8348581Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-06-04T00:32:33.8357969Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-06-04T00:32:33.8579473Z Selecting previously unselected package libgl-dev:amd64. 2021-06-04T00:32:33.8804644Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-06-04T00:32:33.8813035Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-06-04T00:32:33.9115241Z Selecting previously unselected package libglu1-mesa:amd64. 2021-06-04T00:32:33.9340082Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-06-04T00:32:33.9353656Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-06-04T00:32:33.9760237Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-06-04T00:32:33.9914341Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-06-04T00:32:33.9921535Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-06-04T00:32:34.0401301Z Selecting previously unselected package mesa-common-dev:amd64. 2021-06-04T00:32:34.0543646Z Preparing to unpack .../5-mesa-common-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-06-04T00:32:34.0551357Z Unpacking mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-06-04T00:32:34.2025000Z Setting up libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-06-04T00:32:34.2050154Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-06-04T00:32:34.2068809Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-06-04T00:32:34.2088878Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-06-04T00:32:34.2105709Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-06-04T00:32:34.2122317Z Setting up mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-06-04T00:32:34.2140680Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:32:35.4808656Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:37.3367941Z Reading package lists... 2021-06-04T00:32:37.4749777Z Building dependency tree... 2021-06-04T00:32:37.4766454Z Reading state information... 2021-06-04T00:32:37.6108935Z The following additional packages will be installed: 2021-06-04T00:32:37.6110760Z libprotobuf-lite17 libprotoc17 2021-06-04T00:32:37.6562586Z The following NEW packages will be installed: 2021-06-04T00:32:37.6567280Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-06-04T00:32:37.6570658Z protobuf-compiler 2021-06-04T00:32:37.6757356Z 0 upgraded, 5 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:37.6758039Z Need to get 2754 kB of archives. 2021-06-04T00:32:37.6758742Z After this operation, 19.9 MB of additional disk space will be used. 2021-06-04T00:32:37.6761130Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-06-04T00:32:37.6803596Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-06-04T00:32:37.6895539Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-06-04T00:32:37.7120221Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-06-04T00:32:37.7400057Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-06-04T00:32:38.1091026Z Fetched 2754 kB in 0s (34.8 MB/s) 2021-06-04T00:32:38.1377221Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-06-04T00:32:38.1438350Z (Reading database ... 2021-06-04T00:32:38.1438908Z (Reading database ... 5% 2021-06-04T00:32:38.1439862Z (Reading database ... 10% 2021-06-04T00:32:38.1440347Z (Reading database ... 15% 2021-06-04T00:32:38.1440824Z (Reading database ... 20% 2021-06-04T00:32:38.1441283Z (Reading database ... 25% 2021-06-04T00:32:38.1441941Z (Reading database ... 30% 2021-06-04T00:32:38.1442413Z (Reading database ... 35% 2021-06-04T00:32:38.1442884Z (Reading database ... 40% 2021-06-04T00:32:38.1443355Z (Reading database ... 45% 2021-06-04T00:32:38.1443812Z (Reading database ... 50% 2021-06-04T00:32:38.1515126Z (Reading database ... 55% 2021-06-04T00:32:38.1558213Z (Reading database ... 60% 2021-06-04T00:32:38.1588710Z (Reading database ... 65% 2021-06-04T00:32:38.1643652Z (Reading database ... 70% 2021-06-04T00:32:38.1669734Z (Reading database ... 75% 2021-06-04T00:32:38.1699421Z (Reading database ... 80% 2021-06-04T00:32:38.2021504Z (Reading database ... 85% 2021-06-04T00:32:38.2079664Z (Reading database ... 90% 2021-06-04T00:32:38.2368172Z (Reading database ... 95% 2021-06-04T00:32:38.2368712Z (Reading database ... 100% 2021-06-04T00:32:38.2369431Z (Reading database ... 242504 files and directories currently installed.) 2021-06-04T00:32:38.2460104Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-06-04T00:32:38.2481257Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-04T00:32:38.2880196Z Selecting previously unselected package libprotoc17:amd64. 2021-06-04T00:32:38.3067167Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-06-04T00:32:38.3075301Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-04T00:32:38.3881837Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-06-04T00:32:38.4085066Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-06-04T00:32:38.4092952Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-04T00:32:38.5571337Z Selecting previously unselected package libprotoc-dev:amd64. 2021-06-04T00:32:38.5799672Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-06-04T00:32:38.5808005Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-04T00:32:38.6801401Z Selecting previously unselected package protobuf-compiler. 2021-06-04T00:32:38.7046692Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-06-04T00:32:38.7054564Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-06-04T00:32:38.7562988Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-04T00:32:38.7583998Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-06-04T00:32:38.7601078Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-04T00:32:38.7620307Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-04T00:32:38.7638671Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-06-04T00:32:38.7660726Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:32:39.4143106Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:41.2583573Z Reading package lists... 2021-06-04T00:32:41.3943192Z Building dependency tree... 2021-06-04T00:32:41.3959827Z Reading state information... 2021-06-04T00:32:41.5314470Z The following additional packages will be installed: 2021-06-04T00:32:41.5316852Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-06-04T00:32:41.5318579Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-06-04T00:32:41.5320189Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-06-04T00:32:41.5321866Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-06-04T00:32:41.5323631Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-06-04T00:32:41.5325181Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-06-04T00:32:41.5326779Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-06-04T00:32:41.5328421Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-06-04T00:32:41.5330012Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-06-04T00:32:41.5332863Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-06-04T00:32:41.5336043Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-06-04T00:32:41.5341214Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-06-04T00:32:41.5342476Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-06-04T00:32:41.5343715Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-06-04T00:32:41.5344489Z Suggested packages: 2021-06-04T00:32:41.5345594Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-06-04T00:32:41.5347100Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-06-04T00:32:41.5348613Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-06-04T00:32:41.5349962Z nvidia-legacy-304xx-vdpau-driver 2021-06-04T00:32:41.6059261Z The following NEW packages will be installed: 2021-06-04T00:32:41.6062276Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-06-04T00:32:41.6063484Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-06-04T00:32:41.6065873Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-06-04T00:32:41.6068214Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-06-04T00:32:41.6071780Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-06-04T00:32:41.6074887Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-06-04T00:32:41.6077543Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-06-04T00:32:41.6081215Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-06-04T00:32:41.6082408Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-06-04T00:32:41.6084931Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-06-04T00:32:41.6087275Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-06-04T00:32:41.6089539Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-06-04T00:32:41.6092763Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-06-04T00:32:41.6097047Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-06-04T00:32:41.6466659Z 0 upgraded, 76 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:41.6467468Z Need to get 47.1 MB of archives. 2021-06-04T00:32:41.6468272Z After this operation, 195 MB of additional disk space will be used. 2021-06-04T00:32:41.6470206Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-06-04T00:32:41.6642914Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-06-04T00:32:41.6651812Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-06-04T00:32:41.6656923Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-06-04T00:32:41.6663332Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-06-04T00:32:41.6671412Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-06-04T00:32:41.6678141Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-06-04T00:32:41.6706293Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-06-04T00:32:41.7290379Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-06-04T00:32:41.7296630Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-06-04T00:32:41.7309560Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-06-04T00:32:41.7322456Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-06-04T00:32:41.7328810Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-06-04T00:32:41.7332651Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-06-04T00:32:41.7338495Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-06-04T00:32:41.7346140Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-06-04T00:32:41.7387710Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-06-04T00:32:41.7400140Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-06-04T00:32:41.7406928Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-06-04T00:32:41.7414077Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-06-04T00:32:41.7423163Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-06-04T00:32:41.7462368Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-06-04T00:32:41.7539454Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-06-04T00:32:41.7554740Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-06-04T00:32:41.7560660Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-06-04T00:32:41.7580547Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-06-04T00:32:41.8020699Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-06-04T00:32:41.8026952Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-06-04T00:32:41.8030428Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-06-04T00:32:41.8043742Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-06-04T00:32:41.8052036Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-06-04T00:32:41.8059058Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-06-04T00:32:41.8068879Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-06-04T00:32:41.8079539Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-06-04T00:32:41.8126122Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.1 [201 kB] 2021-06-04T00:32:41.8145814Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-06-04T00:32:41.8240978Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-06-04T00:32:41.8242652Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-06-04T00:32:41.9256324Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-06-04T00:32:41.9271301Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-06-04T00:32:41.9273151Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-06-04T00:32:41.9284222Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-06-04T00:32:41.9286330Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-06-04T00:32:41.9288291Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-06-04T00:32:41.9290136Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-06-04T00:32:41.9353993Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-06-04T00:32:41.9361961Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-06-04T00:32:41.9381253Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-06-04T00:32:41.9383635Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-06-04T00:32:41.9482475Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-06-04T00:32:41.9501782Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-06-04T00:32:41.9511864Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-06-04T00:32:41.9516791Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-06-04T00:32:41.9521058Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-06-04T00:32:41.9526076Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-06-04T00:32:41.9528246Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-06-04T00:32:41.9548155Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-06-04T00:32:41.9561944Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-06-04T00:32:41.9568486Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-06-04T00:32:41.9606559Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-06-04T00:32:41.9608120Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-06-04T00:32:41.9616763Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsndfile1 amd64 1.0.28-7 [170 kB] 2021-06-04T00:32:41.9628936Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.10 [262 kB] 2021-06-04T00:32:41.9654617Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-06-04T00:32:41.9686879Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-06-04T00:32:41.9696874Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-06-04T00:32:41.9702812Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-06-04T00:32:41.9835832Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-06-04T00:32:41.9845707Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-06-04T00:32:41.9971078Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-06-04T00:32:41.9974851Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-06-04T00:32:41.9980734Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2618 kB] 2021-06-04T00:32:42.0216878Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2744 kB] 2021-06-04T00:32:42.0464600Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-06-04T00:32:42.0531099Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-06-04T00:32:42.0532930Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-06-04T00:32:42.5758741Z Fetched 47.1 MB in 0s (108 MB/s) 2021-06-04T00:32:42.6034417Z Selecting previously unselected package libaom0:amd64. 2021-06-04T00:32:42.6102617Z (Reading database ... 2021-06-04T00:32:42.6103169Z (Reading database ... 5% 2021-06-04T00:32:42.6103659Z (Reading database ... 10% 2021-06-04T00:32:42.6104130Z (Reading database ... 15% 2021-06-04T00:32:42.6104628Z (Reading database ... 20% 2021-06-04T00:32:42.6105091Z (Reading database ... 25% 2021-06-04T00:32:42.6105569Z (Reading database ... 30% 2021-06-04T00:32:42.6106043Z (Reading database ... 35% 2021-06-04T00:32:42.6106505Z (Reading database ... 40% 2021-06-04T00:32:42.6106977Z (Reading database ... 45% 2021-06-04T00:32:42.6107444Z (Reading database ... 50% 2021-06-04T00:32:42.6178650Z (Reading database ... 55% 2021-06-04T00:32:42.6221509Z (Reading database ... 60% 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package libbs2b0:amd64. 2021-06-04T00:32:46.1058505Z Preparing to unpack .../36-libbs2b0_3.1.0+dfsg-2.2build1_amd64.deb ... 2021-06-04T00:32:46.1064972Z Unpacking libbs2b0:amd64 (3.1.0+dfsg-2.2build1) ... 2021-06-04T00:32:46.1360972Z Selecting previously unselected package libflite1:amd64. 2021-06-04T00:32:46.1570472Z Preparing to unpack .../37-libflite1_2.1-release-3_amd64.deb ... 2021-06-04T00:32:46.1578826Z Unpacking libflite1:amd64 (2.1-release-3) ... 2021-06-04T00:32:47.2171801Z Selecting previously unselected package libserd-0-0:amd64. 2021-06-04T00:32:47.2413070Z Preparing to unpack .../38-libserd-0-0_0.30.2-1_amd64.deb ... 2021-06-04T00:32:47.2421040Z Unpacking libserd-0-0:amd64 (0.30.2-1) ... 2021-06-04T00:32:47.2720490Z Selecting previously unselected package libsord-0-0:amd64. 2021-06-04T00:32:47.2904218Z Preparing to unpack .../39-libsord-0-0_0.16.4-1_amd64.deb ... 2021-06-04T00:32:47.2911687Z Unpacking libsord-0-0:amd64 (0.16.4-1) ... 2021-06-04T00:32:47.3160540Z Selecting 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(2.7.0-2) ... 2021-06-04T00:32:50.4490858Z Setting up libpostproc55:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-04T00:32:50.4511869Z Setting up librubberband2:amd64 (1.8.2-1build1) ... 2021-06-04T00:32:50.4530401Z Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2ubuntu2) ... 2021-06-04T00:32:50.4555916Z Setting up vdpau-driver-all:amd64 (1.3-1ubuntu2) ... 2021-06-04T00:32:50.4572570Z Setting up libsord-0-0:amd64 (0.16.4-1) ... 2021-06-04T00:32:50.4588466Z Setting up libsratom-0-0:amd64 (0.6.4-1) ... 2021-06-04T00:32:50.4607353Z Setting up libswscale5:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-04T00:32:50.4624965Z Setting up libsndfile1:amd64 (1.0.28-7) ... 2021-06-04T00:32:50.4640758Z Setting up liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-06-04T00:32:50.4660316Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.10) ... 2021-06-04T00:32:50.4746366Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-04T00:32:50.4765225Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-04T00:32:50.4781986Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-04T00:32:50.4803388Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-06-04T00:32:50.4822213Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-06-04T00:32:50.4843846Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-04T00:32:50.4865208Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-04T00:32:50.4884971Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-06-04T00:32:50.4915407Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-06-04T00:32:50.4992084Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:32:51.4407924Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:53.3278387Z Reading package lists... 2021-06-04T00:32:53.4659768Z Building dependency tree... 2021-06-04T00:32:53.4676995Z Reading state information... 2021-06-04T00:32:53.5997285Z The following additional packages will be installed: 2021-06-04T00:32:53.6000950Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-06-04T00:32:53.6498194Z The following NEW packages will be installed: 2021-06-04T00:32:53.6499837Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-06-04T00:32:53.6505288Z libmagick++-dev 2021-06-04T00:32:53.6693246Z 0 upgraded, 4 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:53.6693945Z Need to get 309 kB of archives. 2021-06-04T00:32:53.6695046Z After this operation, 2202 kB of additional disk space will be used. 2021-06-04T00:32:53.6696871Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [47.5 kB] 2021-06-04T00:32:53.6727929Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [133 kB] 2021-06-04T00:32:53.6766232Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [127 kB] 2021-06-04T00:32:53.6781205Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [1404 B] 2021-06-04T00:32:54.0480118Z Fetched 309 kB in 0s (13.1 MB/s) 2021-06-04T00:32:54.0800998Z Selecting previously unselected package libmagick++-6-headers. 2021-06-04T00:32:54.0831571Z (Reading database ... 2021-06-04T00:32:54.0832126Z (Reading database ... 5% 2021-06-04T00:32:54.0832616Z (Reading database ... 10% 2021-06-04T00:32:54.0833108Z (Reading database ... 15% 2021-06-04T00:32:54.0833589Z (Reading database ... 20% 2021-06-04T00:32:54.0834052Z (Reading database ... 25% 2021-06-04T00:32:54.0834525Z (Reading database ... 30% 2021-06-04T00:32:54.0834984Z (Reading database ... 35% 2021-06-04T00:32:54.0835462Z (Reading database ... 40% 2021-06-04T00:32:54.0835961Z (Reading database ... 45% 2021-06-04T00:32:54.0836424Z (Reading database ... 50% 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Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-06-04T00:32:54.2596272Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-04T00:32:54.2961687Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-06-04T00:32:54.3144215Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-06-04T00:32:54.3151784Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-04T00:32:54.3560862Z Selecting previously unselected package libmagick++-dev. 2021-06-04T00:32:54.3723741Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-06-04T00:32:54.3790977Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-04T00:32:54.4287332Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-04T00:32:54.4360374Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-04T00:32:54.4381942Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-04T00:32:54.4401804Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-06-04T00:32:54.4470708Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:56.2848578Z Reading package lists... 2021-06-04T00:32:56.4231885Z Building dependency tree... 2021-06-04T00:32:56.4250407Z Reading state information... 2021-06-04T00:32:56.5579847Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-06-04T00:32:56.5581671Z The following additional packages will be installed: 2021-06-04T00:32:56.5583436Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-06-04T00:32:56.5584800Z libijs-0.35 libjbig2dec0 2021-06-04T00:32:56.5590664Z Suggested packages: 2021-06-04T00:32:56.5592407Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-06-04T00:32:56.5593612Z ghostscript-x 2021-06-04T00:32:56.6068149Z The following NEW packages will be installed: 2021-06-04T00:32:56.6072509Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-06-04T00:32:56.6078828Z libgs9-common libijs-0.35 libjbig2dec0 2021-06-04T00:32:56.6303461Z 0 upgraded, 8 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:32:56.6304237Z Need to get 11.2 MB of archives. 2021-06-04T00:32:56.6305078Z After this operation, 39.1 MB of additional disk space will be used. 2021-06-04T00:32:56.6306915Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-06-04T00:32:56.6641922Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-06-04T00:32:56.6732127Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-06-04T00:32:56.9732606Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.2 [681 kB] 2021-06-04T00:32:57.0219627Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-06-04T00:32:57.0266070Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-06-04T00:32:57.0351716Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.2 [2172 kB] 2021-06-04T00:32:57.1279089Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.2 [51.6 kB] 2021-06-04T00:32:57.5112662Z Fetched 11.2 MB in 1s (21.6 MB/s) 2021-06-04T00:32:57.5403566Z Selecting previously unselected package fonts-droid-fallback. 2021-06-04T00:32:57.5476690Z (Reading database ... 2021-06-04T00:32:57.5477431Z (Reading database ... 5% 2021-06-04T00:32:57.5478129Z (Reading 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... 100% 2021-06-04T00:32:57.6508436Z (Reading database ... 243261 files and directories currently installed.) 2021-06-04T00:32:57.6604190Z Preparing to unpack .../0-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... 2021-06-04T00:32:57.6817445Z Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-06-04T00:32:57.8721828Z Selecting previously unselected package fonts-noto-mono. 2021-06-04T00:32:57.8911838Z Preparing to unpack .../1-fonts-noto-mono_20200323-1build1~ubuntu20.04.1_all.deb ... 2021-06-04T00:32:57.8920816Z Unpacking fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-06-04T00:32:57.9242236Z Selecting previously unselected package fonts-urw-base35. 2021-06-04T00:32:57.9429738Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-06-04T00:32:57.9991138Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-06-04T00:32:58.3641937Z Selecting previously unselected package libgs9-common. 2021-06-04T00:32:58.3882002Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.2_all.deb ... 2021-06-04T00:32:58.3893287Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-06-04T00:32:58.4804271Z Selecting previously unselected package libijs-0.35:amd64. 2021-06-04T00:32:58.5052147Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-06-04T00:32:58.5068475Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-06-04T00:32:58.5321566Z Selecting previously unselected package libjbig2dec0:amd64. 2021-06-04T00:32:58.5533547Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-06-04T00:32:58.5545281Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-06-04T00:32:58.5822844Z Selecting previously unselected package libgs9:amd64. 2021-06-04T00:32:58.6070478Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-06-04T00:32:58.6081889Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-06-04T00:32:58.8470203Z Selecting previously unselected package ghostscript. 2021-06-04T00:32:58.8716790Z Preparing to unpack .../7-ghostscript_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-06-04T00:32:58.8725547Z Unpacking ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-06-04T00:32:58.9315769Z Setting up fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-06-04T00:32:58.9351945Z Setting up libijs-0.35:amd64 (0.35-15) ... 2021-06-04T00:32:58.9371557Z Setting up fonts-urw-base35 (20170801.1-3) ... 2021-06-04T00:32:58.9938943Z Setting up libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-06-04T00:32:58.9956631Z Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-06-04T00:32:59.0174662Z Setting up libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-06-04T00:32:59.0192163Z Setting up libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-06-04T00:32:59.0210733Z Setting up ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-06-04T00:32:59.0313167Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-06-04T00:32:59.1264389Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:32:59.1450465Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:33:02.0459727Z Reading package lists... 2021-06-04T00:33:02.2013738Z Building dependency tree... 2021-06-04T00:33:02.2031813Z Reading state information... 2021-06-04T00:33:02.3456132Z The following additional packages will be installed: 2021-06-04T00:33:02.3458315Z libudunits2-0 libudunits2-data 2021-06-04T00:33:02.3945694Z The following NEW packages will be installed: 2021-06-04T00:33:02.3951169Z libudunits2-0 libudunits2-data libudunits2-dev 2021-06-04T00:33:02.4188017Z 0 upgraded, 3 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:02.4188748Z Need to get 429 kB of archives. 2021-06-04T00:33:02.4189449Z After this operation, 1026 kB of additional disk space will be used. 2021-06-04T00:33:02.4191535Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-06-04T00:33:02.4266214Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-06-04T00:33:02.4397642Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-06-04T00:33:02.8390726Z Fetched 429 kB in 0s (7560 kB/s) 2021-06-04T00:33:02.8678110Z Selecting previously unselected package libudunits2-data. 2021-06-04T00:33:02.8751824Z (Reading database ... 2021-06-04T00:33:02.8752372Z (Reading database ... 5% 2021-06-04T00:33:02.8752865Z (Reading database ... 10% 2021-06-04T00:33:02.8753355Z (Reading database ... 15% 2021-06-04T00:33:02.8753827Z (Reading database ... 20% 2021-06-04T00:33:02.8754308Z (Reading database ... 25% 2021-06-04T00:33:02.8754775Z (Reading database ... 30% 2021-06-04T00:33:02.8755253Z (Reading database ... 35% 2021-06-04T00:33:02.8755730Z (Reading database ... 40% 2021-06-04T00:33:02.8756382Z (Reading database ... 45% 2021-06-04T00:33:02.8756871Z (Reading database ... 50% 2021-06-04T00:33:02.8847747Z (Reading database ... 55% 2021-06-04T00:33:02.8890196Z (Reading database ... 60% 2021-06-04T00:33:02.8954306Z (Reading database ... 65% 2021-06-04T00:33:02.8982034Z (Reading database ... 70% 2021-06-04T00:33:02.9012282Z (Reading database ... 75% 2021-06-04T00:33:02.9042901Z (Reading database ... 80% 2021-06-04T00:33:02.9394450Z (Reading database ... 85% 2021-06-04T00:33:02.9457421Z (Reading database ... 90% 2021-06-04T00:33:02.9777473Z (Reading database ... 95% 2021-06-04T00:33:02.9778150Z (Reading database ... 100% 2021-06-04T00:33:02.9779009Z (Reading database ... 243825 files and directories currently installed.) 2021-06-04T00:33:02.9879379Z Preparing to unpack .../libudunits2-data_2.2.26-5_all.deb ... 2021-06-04T00:33:02.9889722Z Unpacking libudunits2-data (2.2.26-5) ... 2021-06-04T00:33:03.0121452Z Selecting previously unselected package libudunits2-0:amd64. 2021-06-04T00:33:03.0364119Z Preparing to unpack .../libudunits2-0_2.2.26-5_amd64.deb ... 2021-06-04T00:33:03.0382741Z Unpacking libudunits2-0:amd64 (2.2.26-5) ... 2021-06-04T00:33:03.0625933Z Selecting previously unselected package libudunits2-dev:amd64. 2021-06-04T00:33:03.0867390Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-06-04T00:33:03.0875009Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-06-04T00:33:03.1556000Z Setting up libudunits2-data (2.2.26-5) ... 2021-06-04T00:33:03.1581655Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-06-04T00:33:03.1601435Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-06-04T00:33:03.1623576Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-06-04T00:33:03.2625511Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:33:05.1779795Z Reading package lists... 2021-06-04T00:33:05.3168900Z Building dependency tree... 2021-06-04T00:33:05.3187477Z Reading state information... 2021-06-04T00:33:05.4997711Z The following NEW packages will be installed: 2021-06-04T00:33:05.5003713Z libjq-dev 2021-06-04T00:33:05.5383999Z 0 upgraded, 1 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:05.5384798Z Need to get 11.2 kB of archives. 2021-06-04T00:33:05.5385679Z After this operation, 47.1 kB of additional disk space will be used. 2021-06-04T00:33:05.5387714Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-06-04T00:33:05.9093773Z Fetched 11.2 kB in 0s (327 kB/s) 2021-06-04T00:33:05.9438809Z Selecting previously unselected package libjq-dev:amd64. 2021-06-04T00:33:05.9439700Z (Reading database ... 2021-06-04T00:33:05.9440187Z (Reading database ... 5% 2021-06-04T00:33:05.9440671Z (Reading database ... 10% 2021-06-04T00:33:05.9441137Z (Reading database ... 15% 2021-06-04T00:33:05.9441614Z (Reading database ... 20% 2021-06-04T00:33:05.9442078Z (Reading database ... 25% 2021-06-04T00:33:05.9442549Z (Reading database ... 30% 2021-06-04T00:33:05.9443018Z (Reading database ... 35% 2021-06-04T00:33:05.9443498Z (Reading database ... 40% 2021-06-04T00:33:05.9443970Z (Reading database ... 45% 2021-06-04T00:33:05.9444427Z (Reading database ... 50% 2021-06-04T00:33:05.9542196Z (Reading database ... 55% 2021-06-04T00:33:05.9583014Z (Reading database ... 60% 2021-06-04T00:33:05.9642203Z (Reading database ... 65% 2021-06-04T00:33:05.9671869Z (Reading database ... 70% 2021-06-04T00:33:05.9701212Z (Reading database ... 75% 2021-06-04T00:33:05.9731652Z (Reading database ... 80% 2021-06-04T00:33:06.0088314Z (Reading database ... 85% 2021-06-04T00:33:06.0156064Z (Reading database ... 90% 2021-06-04T00:33:06.0491035Z (Reading database ... 95% 2021-06-04T00:33:06.0491606Z (Reading database ... 100% 2021-06-04T00:33:06.0492389Z (Reading database ... 243854 files and directories currently installed.) 2021-06-04T00:33:06.0601551Z Preparing to unpack .../libjq-dev_1.6-1ubuntu0.20.04.1_amd64.deb ... 2021-06-04T00:33:06.0614200Z Unpacking libjq-dev:amd64 (1.6-1ubuntu0.20.04.1) ... 2021-06-04T00:33:06.1137555Z Setting up libjq-dev:amd64 (1.6-1ubuntu0.20.04.1) ... 2021-06-04T00:33:07.9708978Z Reading package lists... 2021-06-04T00:33:08.1107208Z Building dependency tree... 2021-06-04T00:33:08.1125913Z Reading state information... 2021-06-04T00:33:08.2935613Z The following NEW packages will be installed: 2021-06-04T00:33:08.2937859Z libmng2 2021-06-04T00:33:08.3206591Z 0 upgraded, 1 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:08.3207629Z Need to get 168 kB of archives. 2021-06-04T00:33:08.3208336Z After this operation, 571 kB of additional disk space will be used. 2021-06-04T00:33:08.3210066Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-06-04T00:33:08.7258479Z Fetched 168 kB in 0s (3050 kB/s) 2021-06-04T00:33:08.7561117Z Selecting previously unselected package libmng2:amd64. 2021-06-04T00:33:08.7612051Z (Reading database ... 2021-06-04T00:33:08.7612613Z (Reading database ... 5% 2021-06-04T00:33:08.7613103Z (Reading database ... 10% 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2021-06-04T00:33:08.8561814Z (Reading database ... 243860 files and directories currently installed.) 2021-06-04T00:33:08.8655754Z Preparing to unpack .../libmng2_2.0.3+dfsg-3_amd64.deb ... 2021-06-04T00:33:08.8673609Z Unpacking libmng2:amd64 (2.0.3+dfsg-3) ... 2021-06-04T00:33:08.9340354Z Setting up libmng2:amd64 (2.0.3+dfsg-3) ... 2021-06-04T00:33:08.9369125Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:33:10.7981411Z Reading package lists... 2021-06-04T00:33:10.9381831Z Building dependency tree... 2021-06-04T00:33:10.9399874Z Reading state information... 2021-06-04T00:33:11.0498197Z E: Unable to locate package libmng1 2021-06-04T00:33:11.1094295Z Reading package lists... 2021-06-04T00:33:11.2535326Z Building dependency tree... 2021-06-04T00:33:11.2555067Z Reading state information... 2021-06-04T00:33:11.3661651Z E: Unable to locate package libapparmor-devel 2021-06-04T00:33:11.4255807Z Reading package lists... 2021-06-04T00:33:11.5684371Z Building dependency tree... 2021-06-04T00:33:11.5704970Z Reading state information... 2021-06-04T00:33:11.7060865Z The following additional packages will be installed: 2021-06-04T00:33:11.7062878Z libij-java 2021-06-04T00:33:11.7544952Z The following NEW packages will be installed: 2021-06-04T00:33:11.7553995Z imagej libij-java 2021-06-04T00:33:11.8029541Z 0 upgraded, 2 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:11.8030597Z Need to get 2328 kB of archives. 2021-06-04T00:33:11.8031832Z After this operation, 2498 kB of additional disk space will be used. 2021-06-04T00:33:11.8033860Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-06-04T00:33:12.0203239Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-06-04T00:33:12.3991217Z Fetched 2328 kB in 0s (8786 kB/s) 2021-06-04T00:33:12.4282184Z Selecting previously unselected package libij-java. 2021-06-04T00:33:12.4338995Z (Reading 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90% 2021-06-04T00:33:12.5297053Z (Reading database ... 95% 2021-06-04T00:33:12.5297622Z (Reading database ... 100% 2021-06-04T00:33:12.5298367Z (Reading database ... 243866 files and directories currently installed.) 2021-06-04T00:33:12.5391658Z Preparing to unpack .../libij-java_1.52r-1_all.deb ... 2021-06-04T00:33:12.5407888Z Unpacking libij-java (1.52r-1) ... 2021-06-04T00:33:12.6231164Z Selecting previously unselected package imagej. 2021-06-04T00:33:12.6456640Z Preparing to unpack .../imagej_1.52r-1_all.deb ... 2021-06-04T00:33:12.6465544Z Unpacking imagej (1.52r-1) ... 2021-06-04T00:33:12.7015994Z Setting up libij-java (1.52r-1) ... 2021-06-04T00:33:12.7039918Z Setting up imagej (1.52r-1) ... 2021-06-04T00:33:12.7063730Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-06-04T00:33:12.7538720Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:33:13.3877366Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-06-04T00:33:15.2808190Z Reading package lists... 2021-06-04T00:33:15.4248501Z Building dependency tree... 2021-06-04T00:33:15.4267544Z Reading state information... 2021-06-04T00:33:15.5656730Z Suggested packages: 2021-06-04T00:33:15.5659654Z bowtie2-examples 2021-06-04T00:33:15.6117908Z The following NEW packages will be installed: 2021-06-04T00:33:15.6122116Z bowtie2 2021-06-04T00:33:15.6505304Z 0 upgraded, 1 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:15.6506746Z Need to get 1324 kB of archives. 2021-06-04T00:33:15.6508039Z After this operation, 5630 kB of additional disk space will be used. 2021-06-04T00:33:15.6510100Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-06-04T00:33:16.1412439Z Fetched 1324 kB in 0s (9158 kB/s) 2021-06-04T00:33:16.1756684Z Selecting previously unselected package bowtie2. 2021-06-04T00:33:16.1757450Z (Reading database ... 2021-06-04T00:33:16.1757939Z (Reading database ... 5% 2021-06-04T00:33:16.1758415Z (Reading database ... 10% 2021-06-04T00:33:16.1758894Z (Reading database ... 15% 2021-06-04T00:33:16.1759520Z (Reading database ... 20% 2021-06-04T00:33:16.1760013Z (Reading database ... 25% 2021-06-04T00:33:16.1760488Z (Reading database ... 30% 2021-06-04T00:33:16.1760951Z (Reading database ... 35% 2021-06-04T00:33:16.1761423Z (Reading database ... 40% 2021-06-04T00:33:16.1761896Z (Reading database ... 45% 2021-06-04T00:33:16.1762355Z (Reading database ... 50% 2021-06-04T00:33:16.1860306Z (Reading database ... 55% 2021-06-04T00:33:16.1901512Z (Reading database ... 60% 2021-06-04T00:33:16.1960303Z (Reading database ... 65% 2021-06-04T00:33:16.1988725Z (Reading database ... 70% 2021-06-04T00:33:16.2017984Z (Reading database ... 75% 2021-06-04T00:33:16.2048193Z (Reading database ... 80% 2021-06-04T00:33:16.2384099Z (Reading database ... 85% 2021-06-04T00:33:16.2445356Z (Reading database ... 90% 2021-06-04T00:33:16.2745205Z (Reading database ... 95% 2021-06-04T00:33:16.2745750Z (Reading database ... 100% 2021-06-04T00:33:16.2746473Z (Reading database ... 243889 files and directories currently installed.) 2021-06-04T00:33:16.2841641Z Preparing to unpack .../bowtie2_2.3.5.1-6build1_amd64.deb ... 2021-06-04T00:33:16.2851604Z Unpacking bowtie2 (2.3.5.1-6build1) ... 2021-06-04T00:33:16.4585019Z Setting up bowtie2 (2.3.5.1-6build1) ... 2021-06-04T00:33:16.4606619Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:33:19.0344567Z Reading package lists... 2021-06-04T00:33:19.1751046Z Building dependency tree... 2021-06-04T00:33:19.1771125Z Reading state information... 2021-06-04T00:33:19.2881071Z E: Unable to locate package install 2021-06-04T00:33:19.2882161Z E: Unable to locate package gdal 2021-06-04T00:33:19.3484096Z Reading package lists... 2021-06-04T00:33:19.4942127Z Building dependency tree... 2021-06-04T00:33:19.4960036Z Reading state information... 2021-06-04T00:33:19.5165650Z Package insighttoolkit4-python is not available, but is referred to by another package. 2021-06-04T00:33:19.5168522Z This may mean that the package is missing, has been obsoleted, or 2021-06-04T00:33:19.5170678Z is only available from another source 2021-06-04T00:33:19.5172387Z 2021-06-04T00:33:19.6070606Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-06-04T00:33:19.6669611Z Reading package lists... 2021-06-04T00:33:19.8111945Z Building dependency tree... 2021-06-04T00:33:19.8129830Z Reading state information... 2021-06-04T00:33:19.8334250Z Package libav-tools is not available, but is referred to by another package. 2021-06-04T00:33:19.8335819Z This may mean that the package is missing, has been obsoleted, or 2021-06-04T00:33:19.8336868Z is only available from another source 2021-06-04T00:33:19.8337816Z However the following packages replace it: 2021-06-04T00:33:19.8338602Z ffmpeg 2021-06-04T00:33:19.8339079Z 2021-06-04T00:33:19.9244567Z E: Package 'libav-tools' has no installation candidate 2021-06-04T00:33:19.9847615Z Reading package lists... 2021-06-04T00:33:20.1250617Z Building dependency tree... 2021-06-04T00:33:20.1267362Z Reading state information... 2021-06-04T00:33:20.2598150Z The following additional packages will be installed: 2021-06-04T00:33:20.2600798Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-06-04T00:33:20.2602769Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-06-04T00:33:20.2604033Z libssh2-1-dev 2021-06-04T00:33:20.2604867Z Suggested packages: 2021-06-04T00:33:20.2605917Z libgcrypt20-doc libmbedtls-doc 2021-06-04T00:33:20.3068482Z The following NEW packages will be installed: 2021-06-04T00:33:20.3070518Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-06-04T00:33:20.3072142Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-06-04T00:33:20.3073273Z libssh2-1-dev 2021-06-04T00:33:20.3258193Z 0 upgraded, 11 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:20.3259143Z Need to get 2667 kB of archives. 2021-06-04T00:33:20.3260787Z After this operation, 11.2 MB of additional disk space will be used. 2021-06-04T00:33:20.3262702Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-06-04T00:33:20.3331368Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1 [470 kB] 2021-06-04T00:33:20.3527544Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-06-04T00:33:20.3533280Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-06-04T00:33:20.3549939Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-06-04T00:33:20.3562793Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-06-04T00:33:20.3579793Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-06-04T00:33:20.3626571Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-06-04T00:33:20.3948136Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-06-04T00:33:20.4024665Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-06-04T00:33:20.4034678Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-06-04T00:33:20.8075276Z Fetched 2667 kB in 0s (23.7 MB/s) 2021-06-04T00:33:20.8353638Z Selecting previously unselected package libgpg-error-dev. 2021-06-04T00:33:20.8425556Z (Reading database ... 2021-06-04T00:33:20.8426353Z (Reading database ... 5% 2021-06-04T00:33:20.8427021Z (Reading database 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2021-06-04T00:33:20.9401856Z (Reading database ... 243915 files and directories currently installed.) 2021-06-04T00:33:20.9491433Z Preparing to unpack .../00-libgpg-error-dev_1.37-1_amd64.deb ... 2021-06-04T00:33:20.9502664Z Unpacking libgpg-error-dev (1.37-1) ... 2021-06-04T00:33:20.9880834Z Selecting previously unselected package libgcrypt20-dev. 2021-06-04T00:33:21.0052382Z Preparing to unpack .../01-libgcrypt20-dev_1.8.5-5ubuntu1_amd64.deb ... 2021-06-04T00:33:21.0061643Z Unpacking libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-06-04T00:33:21.0722316Z Selecting previously unselected package libhttp-parser2.9:amd64. 2021-06-04T00:33:21.0933380Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-06-04T00:33:21.0950181Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-06-04T00:33:21.1200847Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-06-04T00:33:21.1404429Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-06-04T00:33:21.1413988Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-06-04T00:33:21.1800715Z Selecting previously unselected package libmbedx509-0:amd64. 2021-06-04T00:33:21.1984168Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-06-04T00:33:21.1995027Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-06-04T00:33:21.2281417Z Selecting previously unselected package libmbedtls12:amd64. 2021-06-04T00:33:21.2458734Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-06-04T00:33:21.2468398Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-06-04T00:33:21.2758519Z Selecting previously unselected package libgit2-28:amd64. 2021-06-04T00:33:21.2958082Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-06-04T00:33:21.2965529Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-06-04T00:33:21.3561150Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-06-04T00:33:21.3735067Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-06-04T00:33:21.3743744Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-06-04T00:33:21.4361079Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-06-04T00:33:21.4582713Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-06-04T00:33:21.4591435Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-06-04T00:33:21.5120797Z Selecting previously unselected package libhttp-parser-dev. 2021-06-04T00:33:21.5297270Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-06-04T00:33:21.5309028Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-06-04T00:33:21.5561533Z Selecting previously unselected package libgit2-dev:amd64. 2021-06-04T00:33:21.5754451Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-06-04T00:33:21.5762161Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-06-04T00:33:21.6917152Z Setting up libgpg-error-dev (1.37-1) ... 2021-06-04T00:33:21.6942347Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-06-04T00:33:21.6964500Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-06-04T00:33:21.6981018Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-06-04T00:33:21.6998758Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-06-04T00:33:21.7018486Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-06-04T00:33:21.7035384Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-06-04T00:33:21.7053188Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-06-04T00:33:21.7068162Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-06-04T00:33:21.7088006Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-06-04T00:33:21.7103539Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-06-04T00:33:21.7122938Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:33:26.1510974Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-06-04T00:33:26.2512260Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:33:28.1035771Z Reading package lists... 2021-06-04T00:33:28.2446241Z Building dependency tree... 2021-06-04T00:33:28.2465725Z Reading state information... 2021-06-04T00:33:28.4710579Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.1). 2021-06-04T00:33:28.4712259Z libtiff-dev set to manually installed. 2021-06-04T00:33:28.4718150Z 0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:28.5315049Z Reading package lists... 2021-06-04T00:33:28.6757041Z Building dependency tree... 2021-06-04T00:33:28.6775515Z Reading state information... 2021-06-04T00:33:28.8913092Z unixodbc-dev is already the newest version (2.3.7). 2021-06-04T00:33:28.8914411Z 0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:28.9510804Z Reading package lists... 2021-06-04T00:33:29.1003645Z Building dependency tree... 2021-06-04T00:33:29.1022458Z Reading state information... 2021-06-04T00:33:29.2850618Z The following NEW packages will be installed: 2021-06-04T00:33:29.2852477Z libsodium-dev 2021-06-04T00:33:29.3035240Z 0 upgraded, 1 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:29.3036319Z Need to get 169 kB of archives. 2021-06-04T00:33:29.3037092Z After this operation, 826 kB of additional disk space will be used. 2021-06-04T00:33:29.3038892Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-06-04T00:33:29.6776677Z Fetched 169 kB in 0s (9761 kB/s) 2021-06-04T00:33:29.7051226Z Selecting previously unselected package libsodium-dev:amd64. 2021-06-04T00:33:29.7123451Z (Reading database ... 2021-06-04T00:33:29.7124247Z (Reading database ... 5% 2021-06-04T00:33:29.7124930Z (Reading database ... 10% 2021-06-04T00:33:29.7125573Z (Reading database ... 15% 2021-06-04T00:33:29.7126246Z (Reading database ... 20% 2021-06-04T00:33:29.7126896Z (Reading database ... 25% 2021-06-04T00:33:29.7127527Z (Reading database ... 30% 2021-06-04T00:33:29.7128168Z (Reading database ... 35% 2021-06-04T00:33:29.7128826Z (Reading database ... 40% 2021-06-04T00:33:29.7129459Z (Reading database ... 45% 2021-06-04T00:33:29.7130102Z (Reading database ... 50% 2021-06-04T00:33:29.7207215Z (Reading database ... 55% 2021-06-04T00:33:29.7244116Z (Reading database ... 60% 2021-06-04T00:33:29.7298926Z (Reading database ... 65% 2021-06-04T00:33:29.7327896Z (Reading database ... 70% 2021-06-04T00:33:29.7352236Z (Reading database ... 75% 2021-06-04T00:33:29.7378874Z (Reading database ... 80% 2021-06-04T00:33:29.7698075Z (Reading database ... 85% 2021-06-04T00:33:29.7754734Z (Reading database ... 90% 2021-06-04T00:33:29.8043572Z (Reading database ... 95% 2021-06-04T00:33:29.8044184Z (Reading database ... 100% 2021-06-04T00:33:29.8045016Z (Reading database ... 244418 files and directories currently installed.) 2021-06-04T00:33:29.8131837Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-06-04T00:33:29.8141522Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-06-04T00:33:29.8843013Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-06-04T00:33:31.7169210Z Reading package lists... 2021-06-04T00:33:31.8603935Z Building dependency tree... 2021-06-04T00:33:31.8621415Z Reading state information... 2021-06-04T00:33:31.9979529Z The following additional packages will be installed: 2021-06-04T00:33:31.9982585Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-06-04T00:33:32.0442827Z The following NEW packages will be installed: 2021-06-04T00:33:32.0447083Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-06-04T00:33:32.0448570Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-06-04T00:33:32.0672997Z 0 upgraded, 8 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:32.0673682Z Need to get 10.4 MB of archives. 2021-06-04T00:33:32.0674450Z After this operation, 38.0 MB of additional disk space will be used. 2021-06-04T00:33:32.0676154Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-06-04T00:33:32.1146421Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-06-04T00:33:32.1990240Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-06-04T00:33:32.3346824Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-06-04T00:33:32.3877011Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-06-04T00:33:32.4502234Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-06-04T00:33:32.5229900Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-06-04T00:33:32.6746616Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-06-04T00:33:33.0671399Z Fetched 10.4 MB in 1s (16.3 MB/s) 2021-06-04T00:33:33.0935157Z Selecting previously unselected package libarchive-dev:amd64. 2021-06-04T00:33:33.1006511Z (Reading database ... 2021-06-04T00:33:33.1007304Z (Reading database ... 5% 2021-06-04T00:33:33.1007980Z (Reading database ... 10% 2021-06-04T00:33:33.1008647Z (Reading database ... 15% 2021-06-04T00:33:33.1009293Z (Reading database ... 20% 2021-06-04T00:33:33.1009962Z (Reading database ... 25% 2021-06-04T00:33:33.1010611Z (Reading database ... 30% 2021-06-04T00:33:33.1011263Z (Reading database ... 35% 2021-06-04T00:33:33.1011941Z (Reading database ... 40% 2021-06-04T00:33:33.1012572Z (Reading database ... 45% 2021-06-04T00:33:33.1013220Z (Reading database ... 50% 2021-06-04T00:33:33.1088215Z (Reading database ... 55% 2021-06-04T00:33:33.1122231Z (Reading database ... 60% 2021-06-04T00:33:33.1179725Z (Reading database ... 65% 2021-06-04T00:33:33.1207611Z (Reading database ... 70% 2021-06-04T00:33:33.1232590Z (Reading database ... 75% 2021-06-04T00:33:33.1259153Z (Reading database ... 80% 2021-06-04T00:33:33.1579566Z (Reading database ... 85% 2021-06-04T00:33:33.1636593Z (Reading database ... 90% 2021-06-04T00:33:33.1922108Z (Reading database ... 95% 2021-06-04T00:33:33.1922733Z (Reading database ... 100% 2021-06-04T00:33:33.1923569Z (Reading database ... 244488 files and directories currently installed.) 2021-06-04T00:33:33.2009078Z Preparing to unpack .../0-libarchive-dev_3.4.0-2ubuntu1_amd64.deb ... 2021-06-04T00:33:33.2020128Z Unpacking libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-06-04T00:33:33.2720815Z Selecting previously unselected package liblept5:amd64. 2021-06-04T00:33:33.2886119Z Preparing to unpack .../1-liblept5_1.79.0-1_amd64.deb ... 2021-06-04T00:33:33.2901470Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-06-04T00:33:33.3961040Z Selecting previously unselected package libleptonica-dev:amd64. 2021-06-04T00:33:33.4140555Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-06-04T00:33:33.4148142Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-06-04T00:33:33.5475741Z Selecting previously unselected package libtesseract4:amd64. 2021-06-04T00:33:33.5715399Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-06-04T00:33:33.5724116Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-06-04T00:33:33.7001395Z Selecting previously unselected package libtesseract-dev:amd64. 2021-06-04T00:33:33.7218429Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-06-04T00:33:33.7228219Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-06-04T00:33:33.8801520Z Selecting previously unselected package tesseract-ocr-eng. 2021-06-04T00:33:33.8986195Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-06-04T00:33:33.8992297Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-06-04T00:33:34.0561482Z Selecting previously unselected package tesseract-ocr-osd. 2021-06-04T00:33:34.0741758Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-06-04T00:33:34.0751085Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-06-04T00:33:34.3881686Z Selecting previously unselected package tesseract-ocr. 2021-06-04T00:33:34.4074539Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-06-04T00:33:34.4085919Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-06-04T00:33:34.4859737Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-06-04T00:33:34.4882374Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-06-04T00:33:34.4901558Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-06-04T00:33:34.4918068Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-06-04T00:33:34.4939774Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-06-04T00:33:34.4956496Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-06-04T00:33:34.4975872Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-06-04T00:33:34.4993066Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-06-04T00:33:34.5014514Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:33:37.1844010Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:33:39.0176848Z Reading package lists... 2021-06-04T00:33:39.1613582Z Building dependency tree... 2021-06-04T00:33:39.1631376Z Reading state information... 2021-06-04T00:33:39.3777405Z wget is already the newest version (1.20.3-1ubuntu1). 2021-06-04T00:33:39.3778819Z 0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:39.4371385Z Reading package lists... 2021-06-04T00:33:39.5759914Z Building dependency tree... 2021-06-04T00:33:39.5776950Z Reading state information... 2021-06-04T00:33:39.7123951Z The following additional packages will be installed: 2021-06-04T00:33:39.7126276Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-06-04T00:33:39.7127960Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-06-04T00:33:39.7128886Z Suggested packages: 2021-06-04T00:33:39.7130013Z doc-base krb5-doc krb5-user libnorm-doc 2021-06-04T00:33:39.7628022Z The following NEW packages will be installed: 2021-06-04T00:33:39.7632493Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-06-04T00:33:39.7637961Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-06-04T00:33:39.7853515Z 0 upgraded, 10 newly installed, 0 to remove and 44 not upgraded. 2021-06-04T00:33:39.7854410Z Need to get 1459 kB of archives. 2021-06-04T00:33:39.7855190Z After this operation, 7754 kB of additional disk space will be used. 2021-06-04T00:33:39.7857155Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-06-04T00:33:39.7950395Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-06-04T00:33:39.8187680Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-06-04T00:33:39.8329407Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-06-04T00:33:39.8404426Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-06-04T00:33:39.8477485Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-06-04T00:33:39.8679798Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-06-04T00:33:39.8901914Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-06-04T00:33:39.9030565Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-06-04T00:33:39.9079591Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-06-04T00:33:40.3094817Z Fetched 1459 kB in 0s (9386 kB/s) 2021-06-04T00:33:40.3440611Z Selecting previously unselected package libgssrpc4:amd64. 2021-06-04T00:33:40.3466476Z (Reading database ... 2021-06-04T00:33:40.3466983Z (Reading database ... 5% 2021-06-04T00:33:40.3468208Z (Reading database ... 10% 2021-06-04T00:33:40.3468722Z (Reading database ... 15% 2021-06-04T00:33:40.3469603Z (Reading database ... 20% 2021-06-04T00:33:40.3470082Z (Reading database ... 25% 2021-06-04T00:33:40.3470567Z (Reading database ... 30% 2021-06-04T00:33:40.3471048Z (Reading database ... 35% 2021-06-04T00:33:40.3471711Z (Reading database ... 40% 2021-06-04T00:33:40.3472265Z (Reading database ... 45% 2021-06-04T00:33:40.3472831Z (Reading database ... 50% 2021-06-04T00:33:40.3555385Z (Reading database ... 55% 2021-06-04T00:33:40.3599375Z (Reading database ... 60% 2021-06-04T00:33:40.3635281Z (Reading database ... 65% 2021-06-04T00:33:40.3689463Z (Reading database ... 70% 2021-06-04T00:33:40.3717786Z (Reading database ... 75% 2021-06-04T00:33:40.3748234Z (Reading database ... 80% 2021-06-04T00:33:40.4068192Z (Reading database ... 85% 2021-06-04T00:33:40.4144862Z (Reading database ... 90% 2021-06-04T00:33:40.4446409Z (Reading database ... 95% 2021-06-04T00:33:40.4447094Z (Reading database ... 100% 2021-06-04T00:33:40.4447925Z (Reading database ... 244713 files and directories currently installed.) 2021-06-04T00:33:40.4542556Z Preparing to unpack .../0-libgssrpc4_1.17-6ubuntu4.1_amd64.deb ... 2021-06-04T00:33:40.4559749Z Unpacking libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:40.4880898Z Selecting previously unselected package libkdb5-9:amd64. 2021-06-04T00:33:40.5053703Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-06-04T00:33:40.5064378Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:40.5292250Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-06-04T00:33:40.5526370Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-06-04T00:33:40.5534727Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:40.5840882Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-06-04T00:33:40.6014488Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-06-04T00:33:40.6025693Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:40.6320692Z Selecting previously unselected package comerr-dev:amd64. 2021-06-04T00:33:40.6496657Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-06-04T00:33:40.6521819Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-06-04T00:33:40.6751399Z Selecting previously unselected package krb5-multidev:amd64. 2021-06-04T00:33:40.6983782Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-06-04T00:33:40.6993528Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:40.7308634Z Selecting previously unselected package libnorm-dev:amd64. 2021-06-04T00:33:40.7548451Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-06-04T00:33:40.7557749Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-06-04T00:33:40.8198215Z Selecting previously unselected package libpgm-dev:amd64. 2021-06-04T00:33:40.8438136Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-06-04T00:33:40.8447523Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-06-04T00:33:40.8815000Z Selecting previously unselected package libkrb5-dev:amd64. 2021-06-04T00:33:40.9052374Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-06-04T00:33:40.9061244Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:40.9289503Z Selecting previously unselected package libzmq3-dev:amd64. 2021-06-04T00:33:40.9524880Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-06-04T00:33:40.9534087Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-06-04T00:33:41.0473048Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-06-04T00:33:41.0498334Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:41.0516527Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-06-04T00:33:41.0534682Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-06-04T00:33:41.0565410Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:41.0582722Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:41.0602252Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:41.0619406Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:41.0633914Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-06-04T00:33:41.0650766Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-06-04T00:33:41.0671619Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:33:41.0848772Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:33:43.9731953Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-06-04T00:33:45.9206127Z Reading package lists... 2021-06-04T00:33:46.0595925Z Building dependency tree... 2021-06-04T00:33:46.0613954Z Reading state information... 2021-06-04T00:33:46.1750542Z E: Unable to locate package udunits 2021-06-04T00:33:46.2349909Z Reading package lists... 2021-06-04T00:33:46.3745171Z Building dependency tree... 2021-06-04T00:33:46.3762967Z Reading state information... 2021-06-04T00:33:46.5104494Z The following additional packages will be installed: 2021-06-04T00:33:46.5107207Z libwebp6 libwebpdemux2 libwebpmux3 2021-06-04T00:33:46.5585777Z The following NEW packages will be installed: 2021-06-04T00:33:46.5590347Z libwebp-dev libwebpdemux2 2021-06-04T00:33:46.5598466Z The following packages will be upgraded: 2021-06-04T00:33:46.5602708Z libwebp6 libwebpmux3 2021-06-04T00:33:46.5777461Z 2 upgraded, 2 newly installed, 0 to remove and 42 not upgraded. 2021-06-04T00:33:46.5778492Z Need to get 480 kB of archives. 2021-06-04T00:33:46.5779464Z After this operation, 985 kB of additional disk space will be used. 2021-06-04T00:33:46.5782115Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebp6 amd64 0.6.1-2ubuntu0.20.04.1 [185 kB] 2021-06-04T00:33:46.5816386Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebpdemux2 amd64 0.6.1-2ubuntu0.20.04.1 [9576 B] 2021-06-04T00:33:46.5830126Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebpmux3 amd64 0.6.1-2ubuntu0.20.04.1 [19.5 kB] 2021-06-04T00:33:46.5832939Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebp-dev amd64 0.6.1-2ubuntu0.20.04.1 [266 kB] 2021-06-04T00:33:46.9638276Z Fetched 480 kB in 0s (20.7 MB/s) 2021-06-04T00:33:46.9995406Z (Reading database ... 2021-06-04T00:33:46.9996018Z (Reading database ... 5% 2021-06-04T00:33:46.9996506Z (Reading database ... 10% 2021-06-04T00:33:46.9996979Z (Reading database ... 15% 2021-06-04T00:33:46.9997639Z (Reading database ... 20% 2021-06-04T00:33:46.9998108Z (Reading database ... 25% 2021-06-04T00:33:46.9998581Z (Reading database ... 30% 2021-06-04T00:33:46.9999053Z (Reading database ... 35% 2021-06-04T00:33:47.0000038Z (Reading database ... 40% 2021-06-04T00:33:47.0000508Z (Reading database ... 45% 2021-06-04T00:33:47.0000968Z (Reading database ... 50% 2021-06-04T00:33:47.0089848Z (Reading database ... 55% 2021-06-04T00:33:47.0135555Z (Reading database ... 60% 2021-06-04T00:33:47.0174555Z (Reading database ... 65% 2021-06-04T00:33:47.0224357Z (Reading database ... 70% 2021-06-04T00:33:47.0253713Z (Reading database ... 75% 2021-06-04T00:33:47.0283750Z (Reading database ... 80% 2021-06-04T00:33:47.0589641Z (Reading database ... 85% 2021-06-04T00:33:47.0672046Z (Reading database ... 90% 2021-06-04T00:33:47.0972670Z (Reading database ... 95% 2021-06-04T00:33:47.0973249Z (Reading database ... 100% 2021-06-04T00:33:47.0973986Z (Reading database ... 245013 files and directories currently installed.) 2021-06-04T00:33:47.1068665Z Preparing to unpack .../libwebp6_0.6.1-2ubuntu0.20.04.1_amd64.deb ... 2021-06-04T00:33:47.1100757Z Unpacking libwebp6:amd64 (0.6.1-2ubuntu0.20.04.1) over (0.6.1-2) ... 2021-06-04T00:33:47.1560195Z Selecting previously unselected package libwebpdemux2:amd64. 2021-06-04T00:33:47.1736370Z Preparing to unpack .../libwebpdemux2_0.6.1-2ubuntu0.20.04.1_amd64.deb ... 2021-06-04T00:33:47.1748595Z Unpacking libwebpdemux2:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-04T00:33:47.2186188Z Preparing to unpack .../libwebpmux3_0.6.1-2ubuntu0.20.04.1_amd64.deb ... 2021-06-04T00:33:47.2285346Z Unpacking libwebpmux3:amd64 (0.6.1-2ubuntu0.20.04.1) over (0.6.1-2) ... 2021-06-04T00:33:47.2561400Z Selecting previously unselected package libwebp-dev:amd64. 2021-06-04T00:33:47.2744260Z Preparing to unpack .../libwebp-dev_0.6.1-2ubuntu0.20.04.1_amd64.deb ... 2021-06-04T00:33:47.2753065Z Unpacking libwebp-dev:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-04T00:33:47.3486904Z Setting up libwebp6:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-04T00:33:47.3507006Z Setting up libwebpmux3:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-04T00:33:47.3526973Z Setting up libwebpdemux2:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-04T00:33:47.3544655Z Setting up libwebp-dev:amd64 (0.6.1-2ubuntu0.20.04.1) ... 2021-06-04T00:33:47.3563958Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:33:49.2115748Z Reading package lists... 2021-06-04T00:33:49.3499903Z Building dependency tree... 2021-06-04T00:33:49.3517994Z Reading state information... 2021-06-04T00:33:49.4880576Z The following additional packages will be installed: 2021-06-04T00:33:49.4885092Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-06-04T00:33:49.4886626Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-06-04T00:33:49.4890471Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-06-04T00:33:49.4891186Z Suggested packages: 2021-06-04T00:33:49.4892078Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-06-04T00:33:49.4892799Z Recommended packages: 2021-06-04T00:33:49.4893269Z cargo 2021-06-04T00:33:49.5400389Z The following NEW packages will be installed: 2021-06-04T00:33:49.5406312Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-06-04T00:33:49.5407683Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-06-04T00:33:49.5412543Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-06-04T00:33:49.5630087Z 0 upgraded, 13 newly installed, 0 to remove and 42 not upgraded. 2021-06-04T00:33:49.5630796Z Need to get 108 MB of archives. 2021-06-04T00:33:49.5631645Z After this operation, 501 MB of additional disk space will be used. 2021-06-04T00:33:49.5633236Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-06-04T00:33:49.5712154Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-06-04T00:33:49.5721770Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-06-04T00:33:49.5731421Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-06-04T00:33:49.5785438Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-06-04T00:33:49.5818690Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-06-04T00:33:49.5964963Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.47 amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [59.6 MB] 2021-06-04T00:33:49.7176538Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-06-04T00:33:51.6686963Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [28.5 MB] 2021-06-04T00:33:52.4728876Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [1921 kB] 2021-06-04T00:33:52.4925297Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.47.0-1~exp1ubuntu1~20.04.1 [3147 kB] 2021-06-04T00:33:52.5565443Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-06-04T00:33:52.9706231Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [27.5 kB] 2021-06-04T00:33:53.8272216Z Fetched 108 MB in 3s (31.5 MB/s) 2021-06-04T00:33:53.8279484Z Selecting previously unselected package libbabeltrace1:amd64. 2021-06-04T00:33:53.8280312Z (Reading database ... 2021-06-04T00:33:53.8280887Z (Reading database ... 5% 2021-06-04T00:33:53.8281462Z (Reading database ... 10% 2021-06-04T00:33:53.8282013Z (Reading database ... 15% 2021-06-04T00:33:53.8282575Z (Reading database ... 20% 2021-06-04T00:33:53.8283137Z (Reading database ... 25% 2021-06-04T00:33:53.8283692Z (Reading database ... 30% 2021-06-04T00:33:53.8284261Z (Reading database ... 35% 2021-06-04T00:33:53.8284817Z (Reading database ... 40% 2021-06-04T00:33:53.8285362Z (Reading database ... 45% 2021-06-04T00:33:53.8285982Z (Reading database ... 50% 2021-06-04T00:33:53.8286540Z (Reading 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libipt2 (2.0.1-1) ... 2021-06-04T00:33:53.8300120Z Selecting previously unselected package libsource-highlight-common. 2021-06-04T00:33:53.8301549Z Preparing to unpack .../02-libsource-highlight-common_3.1.8-1.2build5_all.deb ... 2021-06-04T00:33:53.8302834Z Unpacking libsource-highlight-common (3.1.8-1.2build5) ... 2021-06-04T00:33:53.8304272Z Selecting previously unselected package libboost-regex1.71.0:amd64. 2021-06-04T00:33:53.8305605Z Preparing to unpack .../03-libboost-regex1.71.0_1.71.0-6ubuntu6_amd64.deb ... 2021-06-04T00:33:53.8306773Z Unpacking libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-06-04T00:33:53.8307986Z Selecting previously unselected package libsource-highlight4v5. 2021-06-04T00:33:53.8309490Z Preparing to unpack .../04-libsource-highlight4v5_3.1.8-1.2build5_amd64.deb ... 2021-06-04T00:33:53.8312945Z Unpacking libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-06-04T00:33:53.8313852Z Selecting previously unselected package libxxhash0:amd64. 2021-06-04T00:33:53.8314799Z Preparing to unpack .../05-libxxhash0_0.7.3-1_amd64.deb ... 2021-06-04T00:33:53.8315594Z Unpacking libxxhash0:amd64 (0.7.3-1) ... 2021-06-04T00:33:53.8423141Z Selecting previously unselected package gdb. 2021-06-04T00:33:53.8671497Z Preparing to unpack .../06-gdb_10.2-0ubuntu1~20.04~1_amd64.deb ... 2021-06-04T00:33:53.8678069Z Unpacking gdb (10.2-0ubuntu1~20.04~1) ... 2021-06-04T00:33:54.1682127Z Selecting previously unselected package libstd-rust-1.47:amd64. 2021-06-04T00:33:54.1880895Z Preparing to unpack .../07-libstd-rust-1.47_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-06-04T00:33:54.1889997Z Unpacking libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-04T00:34:00.1491466Z Selecting previously unselected package libstd-rust-dev:amd64. 2021-06-04T00:34:00.1745565Z Preparing to unpack .../08-libstd-rust-dev_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-06-04T00:34:00.1753756Z Unpacking libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-04T00:34:03.0506095Z Selecting previously unselected package rustc. 2021-06-04T00:34:03.0763112Z Preparing to unpack .../09-rustc_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-06-04T00:34:03.0771217Z Unpacking rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-04T00:34:03.2467750Z Selecting previously unselected package cargo. 2021-06-04T00:34:03.2723413Z Preparing to unpack .../10-cargo_0.47.0-1~exp1ubuntu1~20.04.1_amd64.deb ... 2021-06-04T00:34:03.2732639Z Unpacking cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-06-04T00:34:03.5894706Z Selecting previously unselected package libc6-dbg:amd64. 2021-06-04T00:34:03.6147431Z Preparing to unpack .../11-libc6-dbg_2.31-0ubuntu9.2_amd64.deb ... 2021-06-04T00:34:03.6155797Z Unpacking libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-06-04T00:34:04.6874212Z Selecting previously unselected package rust-gdb. 2021-06-04T00:34:04.7131590Z Preparing to unpack .../12-rust-gdb_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_all.deb ... 2021-06-04T00:34:04.7139115Z Unpacking rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-04T00:34:04.7676536Z Setting up libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-04T00:34:04.7698098Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-06-04T00:34:04.7714511Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-06-04T00:34:04.7731269Z Setting up libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-04T00:34:04.7747972Z Setting up libipt2 (2.0.1-1) ... 2021-06-04T00:34:04.7767893Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-06-04T00:34:04.7784720Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-06-04T00:34:04.7802206Z Setting up rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-04T00:34:04.7817072Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-06-04T00:34:04.7833905Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-06-04T00:34:04.7849565Z Setting up cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-06-04T00:34:04.7865061Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-06-04T00:34:04.7888619Z Setting up rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-06-04T00:34:04.7907820Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:34:04.8091431Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:34:07.7821293Z Reading package lists... 2021-06-04T00:34:07.9179687Z Building dependency tree... 2021-06-04T00:34:07.9198263Z Reading state information... 2021-06-04T00:34:08.0629339Z The following additional packages will be installed: 2021-06-04T00:34:08.0632825Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-06-04T00:34:08.0641448Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-06-04T00:34:08.0643336Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-06-04T00:34:08.0644741Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-06-04T00:34:08.0646218Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-06-04T00:34:08.0647628Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-06-04T00:34:08.0648906Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-06-04T00:34:08.0650384Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-06-04T00:34:08.0651874Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-06-04T00:34:08.0653304Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-06-04T00:34:08.0654786Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-06-04T00:34:08.0656249Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-06-04T00:34:08.0657815Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-06-04T00:34:08.0659529Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-06-04T00:34:08.0661156Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-06-04T00:34:08.0662720Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-06-04T00:34:08.0664200Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-06-04T00:34:08.0665698Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-06-04T00:34:08.0667285Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-06-04T00:34:08.0668556Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-06-04T00:34:08.0669776Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-06-04T00:34:08.0671088Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-06-04T00:34:08.0672316Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-06-04T00:34:08.0673503Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-06-04T00:34:08.0674703Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-06-04T00:34:08.0676133Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-06-04T00:34:08.0677583Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-06-04T00:34:08.0679076Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-06-04T00:34:08.0680699Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-06-04T00:34:08.0682109Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-06-04T00:34:08.0683472Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-06-04T00:34:08.0684762Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-06-04T00:34:08.0686175Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-06-04T00:34:08.0687598Z python3-cycler python3-dateutil python3-decorator python3-future 2021-06-04T00:34:08.0689143Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-06-04T00:34:08.0690693Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-06-04T00:34:08.0692129Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-06-04T00:34:08.0693550Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-06-04T00:34:08.0694924Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-06-04T00:34:08.0696524Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-06-04T00:34:08.0698051Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-06-04T00:34:08.0699433Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-06-04T00:34:08.0700803Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-06-04T00:34:08.0702420Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-06-04T00:34:08.0704193Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-06-04T00:34:08.0705631Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-06-04T00:34:08.0707067Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-06-04T00:34:08.0708600Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-06-04T00:34:08.0709913Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-06-04T00:34:08.0710727Z Suggested packages: 2021-06-04T00:34:08.0711825Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-06-04T00:34:08.0713188Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-06-04T00:34:08.0714633Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-06-04T00:34:08.0716123Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-06-04T00:34:08.0717427Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-06-04T00:34:08.0718828Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-06-04T00:34:08.0720499Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-06-04T00:34:08.0721985Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-06-04T00:34:08.0723364Z python3-gobject python3-nose python3-scipy python3-tornado 2021-06-04T00:34:08.0724790Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-06-04T00:34:08.0726348Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-06-04T00:34:08.0727911Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-06-04T00:34:08.0729349Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-06-04T00:34:08.0730298Z wpagui libengine-pkcs11-openssl 2021-06-04T00:34:08.1530224Z The following NEW packages will be installed: 2021-06-04T00:34:08.1532642Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-06-04T00:34:08.1534437Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-06-04T00:34:08.1536161Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-06-04T00:34:08.1537826Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-06-04T00:34:08.1539576Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-06-04T00:34:08.1541213Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-06-04T00:34:08.1542752Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-06-04T00:34:08.1544467Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-06-04T00:34:08.1546208Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-06-04T00:34:08.1547857Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-06-04T00:34:08.1549566Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-06-04T00:34:08.1551302Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-06-04T00:34:08.1554357Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-06-04T00:34:08.1558935Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-06-04T00:34:08.1560823Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-06-04T00:34:08.1562394Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-06-04T00:34:08.1564119Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-06-04T00:34:08.1565641Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-06-04T00:34:08.1567203Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-06-04T00:34:08.1568477Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-06-04T00:34:08.1569721Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-06-04T00:34:08.1571120Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-06-04T00:34:08.1572361Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-06-04T00:34:08.1573534Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-06-04T00:34:08.1574728Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-06-04T00:34:08.1576189Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-06-04T00:34:08.1577627Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-06-04T00:34:08.1579112Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-06-04T00:34:08.1580611Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-06-04T00:34:08.1581996Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-06-04T00:34:08.1583316Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-06-04T00:34:08.1584621Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-06-04T00:34:08.1586006Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-06-04T00:34:08.1587440Z python3-cycler python3-dateutil python3-decorator python3-future 2021-06-04T00:34:08.1588989Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-06-04T00:34:08.1590529Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-06-04T00:34:08.1591988Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-06-04T00:34:08.1593405Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-06-04T00:34:08.1594774Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-06-04T00:34:08.1596256Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-06-04T00:34:08.1597741Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-06-04T00:34:08.1599136Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-06-04T00:34:08.1600747Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-06-04T00:34:08.1602352Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-06-04T00:34:08.1604012Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-06-04T00:34:08.1605459Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-06-04T00:34:08.1606870Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-06-04T00:34:08.1608430Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-06-04T00:34:08.1609739Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-06-04T00:34:08.1769786Z 0 upgraded, 214 newly installed, 0 to remove and 42 not upgraded. 2021-06-04T00:34:08.1771856Z Need to get 183 MB of archives. 2021-06-04T00:34:08.1773621Z After this operation, 776 MB of additional disk space will be used. 2021-06-04T00:34:08.1775454Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-06-04T00:34:08.1794001Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-06-04T00:34:08.2343299Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 20.2.6-0ubuntu0.20.04.1 [97.7 kB] 2021-06-04T00:34:08.2365871Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-06-04T00:34:08.2384488Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-06-04T00:34:08.2389814Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-06-04T00:34:08.2398922Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-06-04T00:34:08.2405898Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-06-04T00:34:08.2412648Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-06-04T00:34:08.2420510Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-06-04T00:34:08.2464661Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-06-04T00:34:08.2677870Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-06-04T00:34:08.2867731Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-06-04T00:34:08.2877784Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-06-04T00:34:08.2893110Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-06-04T00:34:08.2899721Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-06-04T00:34:08.2903573Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-06-04T00:34:08.2907897Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-06-04T00:34:08.2915315Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-06-04T00:34:08.2919820Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-06-04T00:34:08.2928803Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-06-04T00:34:08.2945788Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-06-04T00:34:08.2949936Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-06-04T00:34:08.3556478Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-06-04T00:34:08.4042520Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-06-04T00:34:08.4072656Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-06-04T00:34:08.4122105Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4ubuntu0.1 [735 kB] 2021-06-04T00:34:08.4319487Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-06-04T00:34:08.4325423Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-06-04T00:34:08.4379967Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-06-04T00:34:08.4440088Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-06-04T00:34:08.4791810Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-06-04T00:34:08.5084035Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-06-04T00:34:08.5115215Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-06-04T00:34:08.5124887Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-06-04T00:34:08.5142375Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-06-04T00:34:08.7998566Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-06-04T00:34:08.8396566Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-06-04T00:34:08.9158575Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-06-04T00:34:08.9595405Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-06-04T00:34:08.9725812Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-06-04T00:34:08.9774316Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-06-04T00:34:08.9791890Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-06-04T00:34:08.9849144Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-06-04T00:34:08.9881390Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-06-04T00:34:08.9934130Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-06-04T00:34:08.9961478Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-06-04T00:34:09.0115609Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-06-04T00:34:09.0142929Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-06-04T00:34:09.0267775Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-06-04T00:34:09.0296935Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-06-04T00:34:09.0339876Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-06-04T00:34:09.0352808Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-06-04T00:34:09.0391665Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-06-04T00:34:09.0575073Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-06-04T00:34:09.0598094Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-06-04T00:34:09.2536996Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-06-04T00:34:09.2712969Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-06-04T00:34:09.2756809Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-06-04T00:34:09.2829664Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-06-04T00:34:09.2838002Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-06-04T00:34:09.2849676Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-06-04T00:34:09.2860190Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-06-04T00:34:09.2898409Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-06-04T00:34:09.2927693Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-06-04T00:34:09.2991697Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-06-04T00:34:09.3054469Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-06-04T00:34:09.3092014Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-06-04T00:34:09.3372352Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-06-04T00:34:09.3508033Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-06-04T00:34:09.4703674Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-06-04T00:34:09.4733115Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-06-04T00:34:09.4809593Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-06-04T00:34:09.4842013Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-06-04T00:34:09.4914073Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-06-04T00:34:09.5054996Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-06-04T00:34:09.5377594Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-06-04T00:34:10.0336286Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-06-04T00:34:10.0409567Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-06-04T00:34:10.0469347Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-06-04T00:34:10.1011847Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-06-04T00:34:10.1020201Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-06-04T00:34:10.1090354Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-06-04T00:34:10.1489940Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-06-04T00:34:10.3450146Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-06-04T00:34:10.4743286Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-core7 amd64 0.7-4ubuntu7 [81.7 kB] 2021-06-04T00:34:10.4760818Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-06-04T00:34:10.4768427Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 avahi-daemon amd64 0.7-4ubuntu7 [61.0 kB] 2021-06-04T00:34:10.4779669Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-06-04T00:34:10.4868776Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-06-04T00:34:10.4875088Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-06-04T00:34:10.4941423Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-06-04T00:34:10.5020772Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-06-04T00:34:10.5153097Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-06-04T00:34:10.5289587Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-06-04T00:34:10.5350868Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-06-04T00:34:10.5884480Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-06-04T00:34:10.5968529Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-06-04T00:34:10.6013241Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7 [7804 B] 2021-06-04T00:34:10.6020210Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmm-glib0 amd64 1.12.8-1 [185 kB] 2021-06-04T00:34:10.6049617Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-06-04T00:34:10.6141752Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-06-04T00:34:10.6344566Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-06-04T00:34:10.6435076Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-06-04T00:34:10.6512211Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-06-04T00:34:10.6835348Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-06-04T00:34:10.7391061Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-06-04T00:34:13.3869176Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-06-04T00:34:13.3977983Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-06-04T00:34:13.4400395Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-06-04T00:34:13.5747116Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-06-04T00:34:13.8685933Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-06-04T00:34:13.8694762Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-06-04T00:34:13.8707947Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4ubuntu0.1 [620 kB] 2021-06-04T00:34:13.8854479Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-06-04T00:34:13.8861374Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-06-04T00:34:13.9078256Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.4 [789 kB] 2021-06-04T00:34:13.9380677Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-06-04T00:34:13.9578482Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-06-04T00:34:13.9585201Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-06-04T00:34:13.9592483Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-06-04T00:34:13.9760745Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-glib4 amd64 1.22.0-2 [101 kB] 2021-06-04T00:34:13.9893353Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-proxy amd64 1.22.0-2 [5908 B] 2021-06-04T00:34:13.9940535Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-06-04T00:34:13.9947607Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-06-04T00:34:14.0011216Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-06-04T00:34:14.0089895Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-06-04T00:34:14.0123371Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-06-04T00:34:14.0171452Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-06-04T00:34:14.0294661Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-06-04T00:34:14.0462577Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-06-04T00:34:14.0573937Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-06-04T00:34:14.2026190Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-06-04T00:34:14.3271844Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-06-04T00:34:14.3391266Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-06-04T00:34:14.3605063Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-06-04T00:34:14.3874217Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-06-04T00:34:14.4271394Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-06-04T00:34:14.4416921Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-06-04T00:34:14.4753461Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-06-04T00:34:14.4834062Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-06-04T00:34:14.5115884Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-06-04T00:34:14.5188985Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-06-04T00:34:14.5565130Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-06-04T00:34:14.5856999Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-06-04T00:34:14.6268737Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-06-04T00:34:14.6790035Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-06-04T00:34:14.8383297Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-06-04T00:34:14.9194874Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-06-04T00:34:15.1319691Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-06-04T00:34:15.1329105Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-06-04T00:34:15.1388747Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-06-04T00:34:15.1436297Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-06-04T00:34:15.1446499Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-06-04T00:34:15.1500446Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-06-04T00:34:15.1507947Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-06-04T00:34:15.1878188Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-06-04T00:34:15.1949697Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-06-04T00:34:15.2259777Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-06-04T00:34:15.5492234Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-06-04T00:34:15.5895353Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-06-04T00:34:15.6226993Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-06-04T00:34:15.6265050Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-glib5 amd64 1.24.8-1 [529 kB] 2021-06-04T00:34:15.6312882Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-proxy amd64 1.24.8-1 [5856 B] 2021-06-04T00:34:15.6329623Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-06-04T00:34:15.6452041Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-06-04T00:34:16.3334596Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 modemmanager amd64 1.12.8-1 [755 kB] 2021-06-04T00:34:16.3337431Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-06-04T00:34:16.3339833Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-06-04T00:34:16.4066412Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-06-04T00:34:16.4138914Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-06-04T00:34:16.4228562Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-06-04T00:34:16.4259166Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-06-04T00:34:16.4264959Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-06-04T00:34:16.4330951Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-06-04T00:34:16.4854218Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-06-04T00:34:16.4908692Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-06-04T00:34:16.5576822Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-06-04T00:34:16.5582928Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-06-04T00:34:16.5864639Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-06-04T00:34:16.5990368Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-06-04T00:34:16.6011098Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-06-04T00:34:16.6586040Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-06-04T00:34:16.6593685Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-06-04T00:34:16.8538163Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-06-04T00:34:16.8571148Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-06-04T00:34:16.8629601Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-06-04T00:34:16.8797172Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-06-04T00:34:16.8976256Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-06-04T00:34:16.9063674Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.4 [363 kB] 2021-06-04T00:34:16.9154574Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-06-04T00:34:16.9294583Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-06-04T00:34:17.0707060Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-06-04T00:34:17.0844937Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-06-04T00:34:17.0915978Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-06-04T00:34:17.1964490Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-06-04T00:34:17.2221223Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-06-04T00:34:17.2278763Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-06-04T00:34:17.2331376Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-06-04T00:34:17.2579109Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-06-04T00:34:17.8355375Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-06-04T00:34:18.5618603Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.10-0ubuntu1~20.04 [104 kB] 2021-06-04T00:34:18.6024475Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-06-04T00:34:18.7147160Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-06-04T00:34:22.5193892Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-06-04T00:34:22.9913408Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-06-04T00:34:23.0644780Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-06-04T00:34:23.0748432Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-06-04T00:34:23.1259637Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-06-04T00:34:23.1407632Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-06-04T00:34:23.1964762Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-06-04T00:34:23.2362320Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-06-04T00:34:23.2427103Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-06-04T00:34:23.2528086Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-06-04T00:34:24.2692710Z Fetched 183 MB in 15s (12.1 MB/s) 2021-06-04T00:34:24.3041864Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-06-04T00:34:24.3074781Z (Reading database ... 2021-06-04T00:34:24.3075324Z (Reading database ... 5% 2021-06-04T00:34:24.3075863Z (Reading database ... 10% 2021-06-04T00:34:24.3076334Z (Reading database ... 15% 2021-06-04T00:34:24.3076837Z (Reading database ... 20% 2021-06-04T00:34:24.3077315Z (Reading database ... 25% 2021-06-04T00:34:24.3077783Z (Reading database ... 30% 2021-06-04T00:34:24.3078266Z (Reading database ... 35% 2021-06-04T00:34:24.3078746Z (Reading database ... 40% 2021-06-04T00:34:24.3079535Z (Reading database ... 45% 2021-06-04T00:34:24.3080021Z (Reading database ... 50% 2021-06-04T00:34:24.3162968Z (Reading database ... 55% 2021-06-04T00:34:24.3208409Z (Reading database ... 60% 2021-06-04T00:34:24.3271479Z (Reading database ... 65% 2021-06-04T00:34:24.3300235Z (Reading database ... 70% 2021-06-04T00:34:24.3330185Z (Reading database ... 75% 2021-06-04T00:34:24.3360090Z (Reading database ... 80% 2021-06-04T00:34:24.3665270Z (Reading database ... 85% 2021-06-04T00:34:24.3743678Z (Reading database ... 90% 2021-06-04T00:34:24.4028945Z (Reading database ... 95% 2021-06-04T00:34:24.4029545Z (Reading database ... 100% 2021-06-04T00:34:24.4030395Z (Reading database ... 245796 files and directories currently installed.) 2021-06-04T00:34:24.4121392Z Preparing to unpack .../000-libdouble-conversion3_3.1.5-4ubuntu1_amd64.deb ... 2021-06-04T00:34:24.4137278Z Unpacking libdouble-conversion3:amd64 (3.1.5-4ubuntu1) ... 2021-06-04T00:34:24.4480301Z Selecting previously unselected package libqt5core5a:amd64. 2021-06-04T00:34:24.4658101Z Preparing to unpack .../001-libqt5core5a_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-04T00:34:24.4730321Z Unpacking libqt5core5a:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:34:24.6481000Z Selecting previously unselected package libegl-mesa0:amd64. 2021-06-04T00:34:24.6684960Z Preparing to unpack .../002-libegl-mesa0_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-06-04T00:34:24.6693067Z Unpacking libegl-mesa0:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-06-04T00:34:24.6977465Z Selecting previously unselected package libegl1:amd64. 2021-06-04T00:34:24.7220745Z Preparing to unpack .../003-libegl1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-06-04T00:34:24.7227798Z Unpacking libegl1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-06-04T00:34:24.7436743Z Selecting previously unselected package libevdev2:amd64. 2021-06-04T00:34:24.7681573Z Preparing to unpack .../004-libevdev2_1.9.0+dfsg-1ubuntu0.1_amd64.deb ... 2021-06-04T00:34:24.7689106Z Unpacking libevdev2:amd64 (1.9.0+dfsg-1ubuntu0.1) ... 2021-06-04T00:34:24.7900294Z Selecting previously unselected package libmtdev1:amd64. 2021-06-04T00:34:24.8140153Z Preparing to unpack .../005-libmtdev1_1.1.5-1.1_amd64.deb ... 2021-06-04T00:34:24.8148739Z Unpacking libmtdev1:amd64 (1.1.5-1.1) ... 2021-06-04T00:34:24.8349619Z Selecting previously unselected package libwacom-common. 2021-06-04T00:34:24.8589070Z Preparing to unpack .../006-libwacom-common_1.3-2ubuntu3_all.deb ... 2021-06-04T00:34:24.8597283Z Unpacking libwacom-common (1.3-2ubuntu3) ... 2021-06-04T00:34:24.9120198Z Selecting previously unselected package libwacom2:amd64. 2021-06-04T00:34:24.9285809Z Preparing to unpack .../007-libwacom2_1.3-2ubuntu3_amd64.deb ... 2021-06-04T00:34:24.9294423Z Unpacking libwacom2:amd64 (1.3-2ubuntu3) ... 2021-06-04T00:34:24.9486218Z Selecting previously unselected package libinput-bin. 2021-06-04T00:34:24.9722479Z Preparing to unpack .../008-libinput-bin_1.15.5-1ubuntu0.2_amd64.deb ... 2021-06-04T00:34:24.9730027Z Unpacking libinput-bin (1.15.5-1ubuntu0.2) ... 2021-06-04T00:34:25.0000196Z Selecting previously unselected package libinput10:amd64. 2021-06-04T00:34:25.0191088Z Preparing to unpack .../009-libinput10_1.15.5-1ubuntu0.2_amd64.deb ... 2021-06-04T00:34:25.0198446Z Unpacking libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-06-04T00:34:25.0520878Z Selecting previously unselected package libqt5dbus5:amd64. 2021-06-04T00:34:25.0715790Z Preparing to unpack .../010-libqt5dbus5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-04T00:34:25.0723727Z Unpacking libqt5dbus5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:34:25.1200316Z Selecting previously unselected package libqt5network5:amd64. 2021-06-04T00:34:25.1360526Z Preparing to unpack .../011-libqt5network5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-04T00:34:25.1367308Z Unpacking libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:34:25.2200704Z Selecting previously unselected package libxcb-icccm4:amd64. 2021-06-04T00:34:25.2390709Z Preparing to unpack .../012-libxcb-icccm4_0.4.1-1.1_amd64.deb ... 2021-06-04T00:34:25.2397207Z Unpacking libxcb-icccm4:amd64 (0.4.1-1.1) ... 2021-06-04T00:34:25.2680755Z Selecting previously unselected package libxcb-util1:amd64. 2021-06-04T00:34:25.2832987Z Preparing to unpack .../013-libxcb-util1_0.4.0-0ubuntu3_amd64.deb ... 2021-06-04T00:34:25.2841193Z Unpacking libxcb-util1:amd64 (0.4.0-0ubuntu3) ... 2021-06-04T00:34:25.3037748Z Selecting previously unselected package libxcb-image0:amd64. 2021-06-04T00:34:25.3276764Z Preparing to unpack .../014-libxcb-image0_0.4.0-1build1_amd64.deb ... 2021-06-04T00:34:25.3284320Z Unpacking libxcb-image0:amd64 (0.4.0-1build1) ... 2021-06-04T00:34:25.3470707Z Selecting previously unselected package libxcb-keysyms1:amd64. 2021-06-04T00:34:25.3706537Z Preparing to unpack .../015-libxcb-keysyms1_0.4.0-1build1_amd64.deb ... 2021-06-04T00:34:25.3714338Z Unpacking libxcb-keysyms1:amd64 (0.4.0-1build1) ... 2021-06-04T00:34:25.3906987Z Selecting previously unselected package libxcb-randr0:amd64. 2021-06-04T00:34:25.4142873Z Preparing to unpack .../016-libxcb-randr0_1.14-2_amd64.deb ... 2021-06-04T00:34:25.4150625Z Unpacking libxcb-randr0:amd64 (1.14-2) ... 2021-06-04T00:34:25.4401247Z Selecting previously unselected package libxcb-render-util0:amd64. 2021-06-04T00:34:25.4586399Z Preparing to unpack .../017-libxcb-render-util0_0.3.9-1build1_amd64.deb ... 2021-06-04T00:34:25.4593459Z Unpacking libxcb-render-util0:amd64 (0.3.9-1build1) ... 2021-06-04T00:34:25.4841243Z Selecting previously unselected package libxcb-xinerama0:amd64. 2021-06-04T00:34:25.5030045Z Preparing to unpack .../018-libxcb-xinerama0_1.14-2_amd64.deb ... 2021-06-04T00:34:25.5036883Z Unpacking libxcb-xinerama0:amd64 (1.14-2) ... 2021-06-04T00:34:25.5281152Z Selecting previously unselected package libxcb-xinput0:amd64. 2021-06-04T00:34:25.5472546Z Preparing to unpack .../019-libxcb-xinput0_1.14-2_amd64.deb ... 2021-06-04T00:34:25.5480217Z Unpacking libxcb-xinput0:amd64 (1.14-2) ... 2021-06-04T00:34:25.5705101Z Selecting previously unselected package libxcb-xkb1:amd64. 2021-06-04T00:34:25.5947972Z Preparing to unpack .../020-libxcb-xkb1_1.14-2_amd64.deb ... 2021-06-04T00:34:25.5955830Z Unpacking libxcb-xkb1:amd64 (1.14-2) ... 2021-06-04T00:34:25.6232328Z Selecting previously unselected package libxkbcommon-x11-0:amd64. 2021-06-04T00:34:25.6423985Z Preparing to unpack .../021-libxkbcommon-x11-0_0.10.0-1_amd64.deb ... 2021-06-04T00:34:25.6430732Z Unpacking libxkbcommon-x11-0:amd64 (0.10.0-1) ... 2021-06-04T00:34:25.6760251Z Selecting previously unselected package libqt5gui5:amd64. 2021-06-04T00:34:25.6939973Z Preparing to unpack .../022-libqt5gui5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-04T00:34:25.7005039Z Unpacking libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:34:25.9785359Z Selecting previously unselected package libqt5widgets5:amd64. 2021-06-04T00:34:26.0034062Z Preparing to unpack .../023-libqt5widgets5_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-06-04T00:34:26.0041449Z Unpacking libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:34:26.2200379Z Selecting previously unselected package libqt5svg5:amd64. 2021-06-04T00:34:26.2397505Z Preparing to unpack .../024-libqt5svg5_5.12.8-0ubuntu1_amd64.deb ... 2021-06-04T00:34:26.2408162Z Unpacking libqt5svg5:amd64 (5.12.8-0ubuntu1) ... 2021-06-04T00:34:26.2800746Z Selecting previously unselected package liborc-0.4-0:amd64. 2021-06-04T00:34:26.2976365Z Preparing to unpack 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qtattributionsscanner-qt5 (5.12.8-0ubuntu1) ... 2021-06-04T00:34:57.0873321Z Setting up libqt5webchannel5:amd64 (5.12.8-0ubuntu1) ... 2021-06-04T00:34:57.0893739Z Setting up python3-plotly (4.4.1+dfsg-1) ... 2021-06-04T00:34:57.2318237Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:34:57.2320125Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-06-04T00:34:57.2321639Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:34:57.2323027Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-06-04T00:34:57.2705596Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:194: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:34:57.2706998Z if direction is "increasing": 2021-06-04T00:34:57.2708477Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:199: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:34:57.2709573Z elif direction is "decreasing": 2021-06-04T00:34:57.2873327Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:176: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:34:57.2874539Z if direction is "increasing": 2021-06-04T00:34:57.2875959Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:34:57.2877014Z elif direction is "decreasing": 2021-06-04T00:34:58.1582490Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:34:58.1584184Z if props["offset_coordinates"] is "data": 2021-06-04T00:34:58.1586035Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-06-04T00:34:58.1587311Z if props["coordinates"] is not "data": 2021-06-04T00:34:58.8849552Z Setting up avahi-daemon (0.7-4ubuntu7) ... 2021-06-04T00:34:59.4284039Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-06-04T00:34:59.4286806Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-06-04T00:34:59.4288909Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-06-04T00:35:00.5770996Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-06-04T00:35:00.5848661Z First installation detected... 2021-06-04T00:35:00.5849458Z Checking NSS setup... 2021-06-04T00:35:00.5883382Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-06-04T00:35:00.5900070Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:00.5914812Z Setting up python3-owslib (0.19.1-1) ... 2021-06-04T00:35:00.8458983Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-06-04T00:35:00.8479858Z Setting up libqmi-glib5:amd64 (1.24.8-1) ... 2021-06-04T00:35:00.8497096Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-06-04T00:35:00.8514500Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-06-04T00:35:00.8531727Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-06-04T00:35:00.8548826Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-06-04T00:35:00.8566385Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-06-04T00:35:00.8583758Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-06-04T00:35:00.8600232Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-06-04T00:35:01.0407878Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-06-04T00:35:01.0426027Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-06-04T00:35:01.0444232Z Setting up grass-core (7.8.2-1build3) ... 2021-06-04T00:35:01.3731813Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:35:02.3480614Z if value is '': 2021-06-04T00:35:02.3488391Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:35:02.3489445Z if do_profiling is "True" or do_profiling is "1": 2021-06-04T00:35:02.3490530Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:35:02.3491491Z if do_profiling is "True" or do_profiling is "1": 2021-06-04T00:35:02.3492574Z /usr/lib/grass78/etc/python/grass/temporal/core.py:582: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-06-04T00:35:02.3493566Z if driver_string is not None and driver_string is not "": 2021-06-04T00:35:02.3494722Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:35:02.3495797Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-06-04T00:35:02.3497026Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-06-04T00:35:02.3498119Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-06-04T00:35:02.3499434Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-06-04T00:35:02.3500543Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3501452Z Setting up libqmi-proxy (1.24.8-1) ... 2021-06-04T00:35:02.3502445Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3503489Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3504494Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-06-04T00:35:02.3505514Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3506650Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3507829Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:02.3508993Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3509993Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-06-04T00:35:02.3511289Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-06-04T00:35:02.3512471Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3513534Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3514467Z Setting up modemmanager (1.12.8-1) ... 2021-06-04T00:35:02.3516242Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-06-04T00:35:02.3518643Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-06-04T00:35:02.3574851Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-06-04T00:35:02.3599077Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-06-04T00:35:02.3623524Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-06-04T00:35:02.3642865Z Setting up libqt5svg5:amd64 (5.12.8-0ubuntu1) ... 2021-06-04T00:35:02.3661955Z Setting up libqt53drender5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3680853Z Setting up qhelpgenerator-qt5 (5.12.8-0ubuntu1) ... 2021-06-04T00:35:02.3697146Z Setting up libqwt-qt5-6 (6.1.4-1.1build1) ... 2021-06-04T00:35:02.3714056Z Setting up libqscintilla2-qt5-15 (2.11.2+dfsg-6) ... 2021-06-04T00:35:02.3736272Z Setting up libqt5webkit5:amd64 (5.212.0~alpha4-1ubuntu2) ... 2021-06-04T00:35:02.3754246Z Setting up libqt5designercomponents5:amd64 (5.12.8-0ubuntu1) ... 2021-06-04T00:35:02.3774013Z Setting up libqt5quickwidgets5:amd64 (5.12.8-0ubuntu1) ... 2021-06-04T00:35:02.3792326Z Setting up libqgis-core3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:02.3813037Z Setting up libqt53dquickscene2d5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3833304Z Setting up libqgis-gui3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:02.3851394Z Setting up libqgis-analysis3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:02.3867498Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-06-04T00:35:02.3883948Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-06-04T00:35:02.3898074Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:02.3915015Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.3932585Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-06-04T00:35:02.5519681Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-06-04T00:35:02.5537181Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.5553288Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:02.5568427Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.3592537Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:32.3608517Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-06-04T00:35:32.3625972Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.3642082Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:32.3656751Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.3672993Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.3688043Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-06-04T00:35:32.3705694Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.5071017Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.5089790Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-06-04T00:35:32.5107821Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.5122694Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-06-04T00:35:32.5141498Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.6634936Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.6653084Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.6675069Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-06-04T00:35:32.6796351Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-06-04T00:35:32.6951562Z Processing triggers for shared-mime-info (1.15-1) ... 2021-06-04T00:35:33.4803771Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-06-04T00:35:33.4960272Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-06-04T00:35:33.5177965Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-06-04T00:35:33.5311026Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... 2021-06-04T00:35:33.5795829Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:35:33.6049587Z Processing triggers for systemd (245.4-4ubuntu3.6) ... 2021-06-04T00:35:33.8436754Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:35:45.1617484Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-06-04T00:35:45.1774375Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-06-04T00:35:47.0609213Z ##[group]Run adigherman/actions/get-repo-name@master 2021-06-04T00:35:47.0609752Z with: 2021-06-04T00:35:47.0610230Z github_slug: neuroconductor/neuroCombat 2021-06-04T00:35:47.0610704Z env: 2021-06-04T00:35:47.0611135Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:35:47.0611582Z TIC_DEPLOY_KEY: 2021-06-04T00:35:47.0612357Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:35:47.0614006Z GITHUB_PAT: *** 2021-06-04T00:35:47.0614762Z COVERALLS_TOKEN: *** 2021-06-04T00:35:47.0615249Z continue-on-error: false 2021-06-04T00:35:47.0615725Z VDIFFR_RUN_TESTS: 2021-06-04T00:35:47.0616202Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:35:47.0616639Z TZ: UTC 2021-06-04T00:35:47.0617009Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:35:47.0617423Z NOT_CRAN: true 2021-06-04T00:35:47.0617779Z ##[endgroup] 2021-06-04T00:35:47.0930651Z repo slug is: neuroconductor/neuroCombat 2021-06-04T00:35:47.1017667Z ##[group]Run adigherman/actions/get-repo-version@master 2021-06-04T00:35:47.1018219Z env: 2021-06-04T00:35:47.1018637Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:35:47.1019091Z TIC_DEPLOY_KEY: 2021-06-04T00:35:47.1019850Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:35:47.1021053Z GITHUB_PAT: *** 2021-06-04T00:35:47.1021810Z COVERALLS_TOKEN: *** 2021-06-04T00:35:47.1022293Z continue-on-error: false 2021-06-04T00:35:47.1022744Z VDIFFR_RUN_TESTS: 2021-06-04T00:35:47.1023208Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:35:47.1023669Z TZ: UTC 2021-06-04T00:35:47.1024034Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:35:47.1024440Z NOT_CRAN: true 2021-06-04T00:35:47.1024792Z ##[endgroup] 2021-06-04T00:35:47.2889397Z ##[group]Run adigherman/actions/get-release-asset@master 2021-06-04T00:35:47.2889963Z with: 2021-06-04T00:35:47.2890353Z repo_name: neuroCombat 2021-06-04T00:35:47.2890762Z repo_version: 1.0.13 2021-06-04T00:35:47.2891145Z runner_os: Linux 2021-06-04T00:35:47.2891515Z R_version: 4.0 2021-06-04T00:35:47.2891834Z env: 2021-06-04T00:35:47.2892265Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:35:47.2892708Z TIC_DEPLOY_KEY: 2021-06-04T00:35:47.2893471Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:35:47.2895149Z GITHUB_PAT: *** 2021-06-04T00:35:47.2895907Z COVERALLS_TOKEN: *** 2021-06-04T00:35:47.2896386Z continue-on-error: false 2021-06-04T00:35:47.2896847Z VDIFFR_RUN_TESTS: 2021-06-04T00:35:47.2897298Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:35:47.2897743Z TZ: UTC 2021-06-04T00:35:47.2898106Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:35:47.2898508Z NOT_CRAN: true 2021-06-04T00:35:47.2898880Z ##[endgroup] 2021-06-04T00:35:47.3223040Z Package: neuroCombat 2021-06-04T00:35:47.3226748Z Version: 1.0.13 2021-06-04T00:35:47.3227748Z OS: Linux 2021-06-04T00:35:47.3316899Z ##[group]Run install.packages('remotes') 2021-06-04T00:35:47.3317565Z install.packages('remotes') 2021-06-04T00:35:47.3318343Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-06-04T00:35:47.3335513Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-06-04T00:35:47.3342670Z shell: /usr/local/bin/Rscript {0} 2021-06-04T00:35:47.3343080Z env: 2021-06-04T00:35:47.3343506Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:35:47.3343969Z TIC_DEPLOY_KEY: 2021-06-04T00:35:47.3344729Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:35:47.3346092Z GITHUB_PAT: *** 2021-06-04T00:35:47.3346865Z COVERALLS_TOKEN: *** 2021-06-04T00:35:47.3347336Z continue-on-error: false 2021-06-04T00:35:47.3347815Z VDIFFR_RUN_TESTS: 2021-06-04T00:35:47.3348287Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:35:47.3348744Z TZ: UTC 2021-06-04T00:35:47.3349115Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:35:47.3349514Z NOT_CRAN: true 2021-06-04T00:35:47.3349893Z ##[endgroup] 2021-06-04T00:35:47.4915645Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:35:47.4917000Z (as ‘lib’ is unspecified) 2021-06-04T00:36:01.6338033Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/remotes_2.4.0.tar.gz' 2021-06-04T00:36:02.1754539Z Content type 'binary/octet-stream' length 393799 bytes (384 KB) 2021-06-04T00:36:02.2154632Z ================================================== 2021-06-04T00:36:02.2155499Z downloaded 384 KB 2021-06-04T00:36:02.2156083Z 2021-06-04T00:36:02.4432746Z * installing *binary* package ‘remotes’ ... 2021-06-04T00:36:02.4477327Z * DONE (remotes) 2021-06-04T00:36:02.4527003Z 2021-06-04T00:36:02.4527962Z The downloaded source packages are in 2021-06-04T00:36:02.4529313Z ‘/tmp/RtmpbhcKI3/downloaded_packages’ 2021-06-04T00:36:19.4703316Z ##[group]Run actions/cache@v1 2021-06-04T00:36:19.4703723Z with: 2021-06-04T00:36:19.4704153Z path: /home/runner/work/_temp/Library 2021-06-04T00:36:19.4706675Z key: Linux-9062e2676fcbc8371c382d1bc4b5d886f4e4bdffdd9e7160e92f55e288306f12-1-011eff4d42d0d01b822a0b5c2f397797910306342f52dac727553b76759804e6 2021-06-04T00:36:19.4709819Z restore-keys: Linux-9062e2676fcbc8371c382d1bc4b5d886f4e4bdffdd9e7160e92f55e288306f12-1- 2021-06-04T00:36:19.4710926Z env: 2021-06-04T00:36:19.4711343Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:36:19.4711800Z TIC_DEPLOY_KEY: 2021-06-04T00:36:19.4712575Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:36:19.4714365Z GITHUB_PAT: *** 2021-06-04T00:36:19.4715132Z COVERALLS_TOKEN: *** 2021-06-04T00:36:19.4715613Z continue-on-error: false 2021-06-04T00:36:19.4716067Z VDIFFR_RUN_TESTS: 2021-06-04T00:36:19.4716540Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:36:19.4717017Z TZ: UTC 2021-06-04T00:36:19.4717404Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:36:19.4717796Z NOT_CRAN: true 2021-06-04T00:36:19.4718167Z ##[endgroup] 2021-06-04T00:36:19.5120821Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-06-04T00:36:19.5202293Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-06-04T00:36:19.5203071Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-06-04T00:36:19.5203795Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-06-04T00:36:19.5204398Z sudo -s eval "$sysreqs" 2021-06-04T00:36:19.5247004Z shell: /usr/bin/bash -e {0} 2021-06-04T00:36:19.5247397Z env: 2021-06-04T00:36:19.5247835Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:36:19.5248303Z TIC_DEPLOY_KEY: 2021-06-04T00:36:19.5249064Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:36:19.5250340Z GITHUB_PAT: *** 2021-06-04T00:36:19.5251112Z COVERALLS_TOKEN: *** 2021-06-04T00:36:19.5251584Z continue-on-error: false 2021-06-04T00:36:19.5252052Z VDIFFR_RUN_TESTS: 2021-06-04T00:36:19.5252528Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:36:19.5252953Z TZ: UTC 2021-06-04T00:36:19.5253353Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:36:19.5253760Z NOT_CRAN: true 2021-06-04T00:36:19.5254216Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-06-04T00:36:19.5254684Z ##[endgroup] 2021-06-04T00:36:19.7051583Z Using github PAT from envvar GITHUB_PAT 2021-06-04T00:36:20.2365389Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-06-04T00:36:34.8852485Z rprojroot (NA -> 2.0.2) [CRAN] 2021-06-04T00:36:34.8853612Z crayon (NA -> 1.4.1) [CRAN] 2021-06-04T00:36:34.8854279Z R6 (NA -> 2.5.0) [CRAN] 2021-06-04T00:36:34.8854930Z desc (NA -> 1.3.0) [CRAN] 2021-06-04T00:36:34.8855591Z debugme (NA -> 1.1.0) [CRAN] 2021-06-04T00:36:34.8878841Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-06-04T00:36:34.8898847Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:36:34.8899944Z (as ‘lib’ is unspecified) 2021-06-04T00:36:48.5988672Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-06-04T00:36:49.0959909Z Content type 'binary/octet-stream' length 97084 bytes (94 KB) 2021-06-04T00:36:49.1072446Z ================================================== 2021-06-04T00:36:49.1074622Z downloaded 94 KB 2021-06-04T00:36:49.1077514Z 2021-06-04T00:36:49.1114369Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-06-04T00:36:49.5026531Z Content type 'binary/octet-stream' length 137207 bytes (133 KB) 2021-06-04T00:36:49.5309023Z ================================================== 2021-06-04T00:36:49.5309602Z downloaded 133 KB 2021-06-04T00:36:49.5309911Z 2021-06-04T00:36:49.5344505Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.0.tar.gz' 2021-06-04T00:36:50.0251996Z Content type 'binary/octet-stream' length 81940 bytes (80 KB) 2021-06-04T00:36:50.0253249Z ================================================== 2021-06-04T00:36:50.0253903Z downloaded 80 KB 2021-06-04T00:36:50.0254346Z 2021-06-04T00:36:50.0287900Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.3.0.tar.gz' 2021-06-04T00:36:50.5705554Z Content type 'binary/octet-stream' length 525226 bytes (512 KB) 2021-06-04T00:36:50.6173355Z ================================================== 2021-06-04T00:36:50.6174376Z downloaded 512 KB 2021-06-04T00:36:50.6174656Z 2021-06-04T00:36:50.6213387Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-06-04T00:36:51.4834068Z Content type 'binary/octet-stream' length 1015329 bytes (991 KB) 2021-06-04T00:36:51.5399716Z ================================================== 2021-06-04T00:36:51.5400231Z downloaded 991 KB 2021-06-04T00:36:51.5400510Z 2021-06-04T00:36:51.7527599Z * installing *binary* package ‘rprojroot’ ... 2021-06-04T00:36:51.7572425Z * DONE (rprojroot) 2021-06-04T00:36:51.9545959Z * installing *binary* package ‘crayon’ ... 2021-06-04T00:36:51.9585267Z * DONE (crayon) 2021-06-04T00:36:52.1569115Z * installing *binary* package ‘R6’ ... 2021-06-04T00:36:52.1608583Z * DONE (R6) 2021-06-04T00:36:52.3950901Z * installing *binary* package ‘desc’ ... 2021-06-04T00:36:52.3997147Z * DONE (desc) 2021-06-04T00:36:52.6334539Z * installing *binary* package ‘debugme’ ... 2021-06-04T00:36:52.6379009Z * DONE (debugme) 2021-06-04T00:36:52.6430638Z 2021-06-04T00:36:52.6431506Z The downloaded source packages are in 2021-06-04T00:36:52.6432865Z ‘/tmp/RtmpJbVrU3/downloaded_packages’ 2021-06-04T00:36:52.6447707Z Running `R CMD build`... 2021-06-04T00:36:52.8601931Z * checking for file ‘/tmp/RtmpJbVrU3/remotes65741a83ee8e/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-06-04T00:36:52.8603129Z * preparing ‘sysreqs’: 2021-06-04T00:36:52.8603908Z * checking DESCRIPTION meta-information ... OK 2021-06-04T00:36:52.8604927Z * checking for LF line-endings in source and make files and shell scripts 2021-06-04T00:36:52.8605715Z * checking for empty or unneeded directories 2021-06-04T00:36:52.8606483Z Omitted ‘LazyData’ from DESCRIPTION 2021-06-04T00:36:52.8607336Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-06-04T00:36:52.8608587Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:36:52.8609467Z (as ‘lib’ is unspecified) 2021-06-04T00:36:53.0506607Z * installing *source* package ‘sysreqs’ ... 2021-06-04T00:36:53.0508479Z ** using staged installation 2021-06-04T00:36:53.0631205Z ** R 2021-06-04T00:36:53.0662923Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:36:53.4000045Z ** help 2021-06-04T00:36:53.4200542Z *** installing help indices 2021-06-04T00:36:53.4360903Z ** building package indices 2021-06-04T00:36:53.6133289Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:36:53.7919396Z ** testing if installed package can be loaded from final location 2021-06-04T00:36:53.9702222Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:36:53.9708552Z * DONE (sysreqs) 2021-06-04T00:37:10.1301684Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-06-04T00:37:10.1303999Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-06-04T00:37:10.1305639Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-06-04T00:37:10.1531082Z Hit:4 http://security.ubuntu.com/ubuntu focal-security InRelease 2021-06-04T00:37:10.2706029Z Hit:5 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-06-04T00:37:10.2777360Z Hit:6 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-06-04T00:37:10.4356365Z Hit:7 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-06-04T00:37:11.5478361Z Reading package lists... 2021-06-04T00:37:11.6192953Z Reading package lists... 2021-06-04T00:37:12.3851475Z Building dependency tree... 2021-06-04T00:37:12.3858278Z Reading state information... 2021-06-04T00:37:12.3859800Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-06-04T00:37:12.3860788Z libicu-dev set to manually installed. 2021-06-04T00:37:12.3861837Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.4). 2021-06-04T00:37:12.3862810Z pandoc is already the newest version (2.7.3-1). 2021-06-04T00:37:12.3863661Z The following additional packages will be installed: 2021-06-04T00:37:12.3864901Z libbibutils6 libghc-pandoc-citeproc-data 2021-06-04T00:37:12.3865756Z Suggested packages: 2021-06-04T00:37:12.3866767Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-06-04T00:37:12.3867658Z The following NEW packages will be installed: 2021-06-04T00:37:12.3868892Z libbibutils6 libcurl4-openssl-dev libghc-pandoc-citeproc-data 2021-06-04T00:37:12.3869943Z pandoc-citeproc 2021-06-04T00:37:12.3870746Z 0 upgraded, 4 newly installed, 0 to remove and 42 not upgraded. 2021-06-04T00:37:12.3871491Z Need to get 13.7 MB of archives. 2021-06-04T00:37:12.3872302Z After this operation, 109 MB of additional disk space will be used. 2021-06-04T00:37:12.3873751Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB] 2021-06-04T00:37:12.3875831Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.5 [321 kB] 2021-06-04T00:37:12.3877941Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB] 2021-06-04T00:37:12.3880116Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB] 2021-06-04T00:37:12.8412993Z Fetched 13.7 MB in 0s (28.3 MB/s) 2021-06-04T00:37:12.8727273Z Selecting previously unselected package libbibutils6. 2021-06-04T00:37:12.8812179Z (Reading database ... 2021-06-04T00:37:12.8813130Z (Reading database ... 5% 2021-06-04T00:37:12.8813706Z (Reading database ... 10% 2021-06-04T00:37:12.8814179Z (Reading database ... 15% 2021-06-04T00:37:12.8814662Z (Reading database ... 20% 2021-06-04T00:37:12.8815129Z (Reading database ... 25% 2021-06-04T00:37:12.8815604Z (Reading database ... 30% 2021-06-04T00:37:12.8816081Z (Reading database ... 35% 2021-06-04T00:37:12.8816581Z (Reading database ... 40% 2021-06-04T00:37:12.8817065Z (Reading database ... 45% 2021-06-04T00:37:12.8832105Z (Reading database ... 50% 2021-06-04T00:37:12.8920074Z (Reading database ... 55% 2021-06-04T00:37:12.8956887Z (Reading database ... 60% 2021-06-04T00:37:12.9026402Z (Reading database ... 65% 2021-06-04T00:37:12.9055175Z (Reading database ... 70% 2021-06-04T00:37:12.9088886Z (Reading database ... 75% 2021-06-04T00:37:12.9385173Z (Reading database ... 80% 2021-06-04T00:37:12.9439761Z (Reading database ... 85% 2021-06-04T00:37:12.9538883Z (Reading database ... 90% 2021-06-04T00:37:12.9869901Z (Reading database ... 95% 2021-06-04T00:37:12.9870916Z (Reading database ... 100% 2021-06-04T00:37:12.9871969Z (Reading database ... 261007 files and directories currently installed.) 2021-06-04T00:37:12.9978445Z Preparing to unpack .../libbibutils6_6.2-1_amd64.deb ... 2021-06-04T00:37:12.9995142Z Unpacking libbibutils6 (6.2-1) ... 2021-06-04T00:37:13.0720911Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-06-04T00:37:13.0898271Z Preparing to unpack .../libcurl4-openssl-dev_7.68.0-1ubuntu2.5_amd64.deb ... 2021-06-04T00:37:13.0909429Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-06-04T00:37:13.1481193Z Selecting previously unselected package libghc-pandoc-citeproc-data. 2021-06-04T00:37:13.1676987Z Preparing to unpack .../libghc-pandoc-citeproc-data_0.15.0.1-1build4_all.deb ... 2021-06-04T00:37:13.1685526Z Unpacking libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-06-04T00:37:13.1961098Z Selecting previously unselected package pandoc-citeproc. 2021-06-04T00:37:13.2219282Z Preparing to unpack .../pandoc-citeproc_0.15.0.1-1build4_amd64.deb ... 2021-06-04T00:37:13.2226215Z Unpacking pandoc-citeproc (0.15.0.1-1build4) ... 2021-06-04T00:37:13.2253105Z Replaced by files in installed package pandoc (2.7.3-1) ... 2021-06-04T00:37:14.5256388Z Setting up libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-06-04T00:37:14.5275229Z Setting up libbibutils6 (6.2-1) ... 2021-06-04T00:37:14.5298125Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-06-04T00:37:14.5316277Z Setting up pandoc-citeproc (0.15.0.1-1build4) ... 2021-06-04T00:37:14.5339476Z Processing triggers for man-db (2.9.1-1) ... 2021-06-04T00:37:17.4999939Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-06-04T00:37:19.3489554Z ##[group]Run remotes::install_github("ropensci/tic") 2021-06-04T00:37:19.3490261Z remotes::install_github("ropensci/tic") 2021-06-04T00:37:19.3490909Z remotes::install_github("muschellij2/ghtravis") 2021-06-04T00:37:19.3491566Z remotes::install_github("muschellij2/aghast") 2021-06-04T00:37:19.3492167Z remotes::install_cran("covr") 2021-06-04T00:37:19.3498926Z shell: /usr/local/bin/Rscript {0} 2021-06-04T00:37:19.3499340Z env: 2021-06-04T00:37:19.3500023Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:37:19.3500480Z TIC_DEPLOY_KEY: 2021-06-04T00:37:19.3501262Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:37:19.3502851Z GITHUB_PAT: *** 2021-06-04T00:37:19.3503701Z COVERALLS_TOKEN: *** 2021-06-04T00:37:19.3504215Z continue-on-error: false 2021-06-04T00:37:19.3504681Z VDIFFR_RUN_TESTS: 2021-06-04T00:37:19.3505140Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:37:19.3505613Z TZ: UTC 2021-06-04T00:37:19.3506001Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:37:19.3506408Z NOT_CRAN: true 2021-06-04T00:37:19.3506774Z ##[endgroup] 2021-06-04T00:37:19.5314771Z Using github PAT from envvar GITHUB_PAT 2021-06-04T00:37:19.9464799Z Downloading GitHub repo ropensci/tic@HEAD 2021-06-04T00:37:34.8537839Z rlang (NA -> 0.4.11) [CRAN] 2021-06-04T00:37:34.8539355Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-06-04T00:37:34.8540366Z glue (NA -> 1.4.2 ) [CRAN] 2021-06-04T00:37:34.8541285Z sys (NA -> 3.4 ) [CRAN] 2021-06-04T00:37:34.8542211Z askpass (NA -> 1.1 ) [CRAN] 2021-06-04T00:37:34.8543217Z openssl (NA -> 1.4.4 ) [CRAN] 2021-06-04T00:37:34.8544121Z mime (NA -> 0.10 ) [CRAN] 2021-06-04T00:37:34.8545013Z curl (NA -> 4.3.1 ) [CRAN] 2021-06-04T00:37:34.8545916Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-06-04T00:37:34.8546821Z ini (NA -> 0.3.1 ) [CRAN] 2021-06-04T00:37:34.8547702Z httr (NA -> 1.4.2 ) [CRAN] 2021-06-04T00:37:34.8548632Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-06-04T00:37:34.8549845Z cli (NA -> 2.5.0 ) [CRAN] 2021-06-04T00:37:34.8551812Z zip (NA -> 2.2.0 ) [CRAN] 2021-06-04T00:37:34.8552784Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-06-04T00:37:34.8553663Z credentials (NA -> 1.3.0 ) [CRAN] 2021-06-04T00:37:34.8554533Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-06-04T00:37:34.8555345Z yaml (NA -> 2.2.1 ) [CRAN] 2021-06-04T00:37:34.8556132Z withr (NA -> 2.4.2 ) [CRAN] 2021-06-04T00:37:34.8556948Z whisker (NA -> 0.4 ) [CRAN] 2021-06-04T00:37:34.8557788Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-06-04T00:37:34.8558608Z purrr (NA -> 0.3.4 ) [CRAN] 2021-06-04T00:37:34.8559766Z lifecycle (NA -> 1.0.0 ) [CRAN] 2021-06-04T00:37:34.8560627Z gh (NA -> 1.3.0 ) [CRAN] 2021-06-04T00:37:34.8561412Z gert (NA -> 1.3.0 ) [CRAN] 2021-06-04T00:37:34.8562204Z fs (NA -> 1.5.0 ) [CRAN] 2021-06-04T00:37:34.8563000Z clipr (NA -> 0.7.1 ) [CRAN] 2021-06-04T00:37:34.8563809Z cachem (NA -> 1.0.5 ) [CRAN] 2021-06-04T00:37:34.8564642Z usethis (NA -> 2.0.1 ) [CRAN] 2021-06-04T00:37:34.8565536Z memoise (NA -> 2.0.0 ) [CRAN] 2021-06-04T00:37:34.8566357Z git2r (NA -> 0.28.0) [CRAN] 2021-06-04T00:37:34.8631219Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-06-04T00:37:34.8639768Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:37:34.8641477Z (as ‘lib’ is unspecified) 2021-06-04T00:37:48.7363437Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-06-04T00:37:49.0277908Z Content type 'binary/octet-stream' length 1395145 bytes (1.3 MB) 2021-06-04T00:37:49.1959993Z ================================================== 2021-06-04T00:37:49.1960551Z downloaded 1.3 MB 2021-06-04T00:37:49.1961053Z 2021-06-04T00:37:49.1995691Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-06-04T00:37:49.4805763Z Content type 'binary/octet-stream' length 232460 bytes (227 KB) 2021-06-04T00:37:49.4956507Z ================================================== 2021-06-04T00:37:49.4957359Z downloaded 227 KB 2021-06-04T00:37:49.4957944Z 2021-06-04T00:37:49.4993326Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-06-04T00:37:49.7213470Z Content type 'binary/octet-stream' length 144550 bytes (141 KB) 2021-06-04T00:37:49.7323130Z ================================================== 2021-06-04T00:37:49.7324201Z downloaded 141 KB 2021-06-04T00:37:49.7324729Z 2021-06-04T00:37:49.7351761Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-06-04T00:37:50.0160556Z Content type 'binary/octet-stream' length 54926 bytes (53 KB) 2021-06-04T00:37:50.0206847Z ================================================== 2021-06-04T00:37:50.0207722Z downloaded 53 KB 2021-06-04T00:37:50.0208263Z 2021-06-04T00:37:50.0243175Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-06-04T00:37:50.3087192Z Content type 'binary/octet-stream' length 23680 bytes (23 KB) 2021-06-04T00:37:50.3090207Z ================================================== 2021-06-04T00:37:50.3090986Z downloaded 23 KB 2021-06-04T00:37:50.3091519Z 2021-06-04T00:37:50.3120069Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.4.tar.gz' 2021-06-04T00:37:50.8612468Z Content type 'binary/octet-stream' length 1492423 bytes (1.4 MB) 2021-06-04T00:37:50.8915646Z ================================================== 2021-06-04T00:37:50.8916444Z downloaded 1.4 MB 2021-06-04T00:37:50.8917020Z 2021-06-04T00:37:50.9030358Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.10.tar.gz' 2021-06-04T00:37:51.4384818Z Content type 'binary/octet-stream' length 37651 bytes (36 KB) 2021-06-04T00:37:51.4393279Z ================================================== 2021-06-04T00:37:51.4395471Z downloaded 36 KB 2021-06-04T00:37:51.4395841Z 2021-06-04T00:37:51.4429201Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.1.tar.gz' 2021-06-04T00:37:51.7144578Z Content type 'binary/octet-stream' length 905527 bytes (884 KB) 2021-06-04T00:37:51.7408782Z ================================================== 2021-06-04T00:37:51.7409288Z downloaded 884 KB 2021-06-04T00:37:51.7409569Z 2021-06-04T00:37:51.7441582Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-06-04T00:37:52.0531176Z Content type 'binary/octet-stream' length 536214 bytes (523 KB) 2021-06-04T00:37:52.0750735Z ================================================== 2021-06-04T00:37:52.0751281Z downloaded 523 KB 2021-06-04T00:37:52.0751583Z 2021-06-04T00:37:52.0791337Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-06-04T00:37:52.7251884Z Content type 'binary/octet-stream' length 13018 bytes (12 KB) 2021-06-04T00:37:52.7254675Z ================================================== 2021-06-04T00:37:52.7255203Z downloaded 12 KB 2021-06-04T00:37:52.7255518Z 2021-06-04T00:37:52.7294021Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-06-04T00:37:53.2633028Z Content type 'binary/octet-stream' length 501372 bytes (489 KB) 2021-06-04T00:37:53.2855644Z ================================================== 2021-06-04T00:37:53.2856230Z downloaded 489 KB 2021-06-04T00:37:53.2856552Z 2021-06-04T00:37:53.2895842Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-06-04T00:37:53.5655756Z Content type 'binary/octet-stream' length 93295 bytes (91 KB) 2021-06-04T00:37:53.5726839Z ================================================== 2021-06-04T00:37:53.5727419Z downloaded 91 KB 2021-06-04T00:37:53.5727743Z 2021-06-04T00:37:53.5758398Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_2.5.0.tar.gz' 2021-06-04T00:37:53.8457946Z Content type 'binary/octet-stream' length 519945 bytes (507 KB) 2021-06-04T00:37:53.8664395Z ================================================== 2021-06-04T00:37:53.8664958Z downloaded 507 KB 2021-06-04T00:37:53.8665282Z 2021-06-04T00:37:53.8701076Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.2.0.tar.gz' 2021-06-04T00:37:55.4190978Z Content type 'binary/octet-stream' length 636985 bytes (622 KB) 2021-06-04T00:37:55.4423370Z ================================================== 2021-06-04T00:37:55.4423897Z downloaded 622 KB 2021-06-04T00:37:55.4424179Z 2021-06-04T00:37:55.4461095Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-06-04T00:37:55.6607976Z Content type 'binary/octet-stream' length 273399 bytes (266 KB) 2021-06-04T00:37:55.6781304Z ================================================== 2021-06-04T00:37:55.6781874Z downloaded 266 KB 2021-06-04T00:37:55.6782201Z 2021-06-04T00:37:55.6819232Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.0.tar.gz' 2021-06-04T00:37:56.2166855Z Content type 'binary/octet-stream' length 171705 bytes (167 KB) 2021-06-04T00:37:56.2287220Z ================================================== 2021-06-04T00:37:56.2288086Z downloaded 167 KB 2021-06-04T00:37:56.2288661Z 2021-06-04T00:37:56.2325300Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-06-04T00:37:56.8207726Z Content type 'binary/octet-stream' length 241070 bytes (235 KB) 2021-06-04T00:37:56.9335037Z ================================================== 2021-06-04T00:37:56.9336132Z downloaded 235 KB 2021-06-04T00:37:56.9336684Z 2021-06-04T00:37:56.9373004Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-06-04T00:37:57.3315566Z Content type 'binary/octet-stream' length 283697 bytes (277 KB) 2021-06-04T00:37:57.3503102Z ================================================== 2021-06-04T00:37:57.3503856Z downloaded 277 KB 2021-06-04T00:37:57.3504195Z 2021-06-04T00:37:57.3547342Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-06-04T00:37:57.6261105Z Content type 'binary/octet-stream' length 206158 bytes (201 KB) 2021-06-04T00:37:57.6404821Z ================================================== 2021-06-04T00:37:57.6405605Z downloaded 201 KB 2021-06-04T00:37:57.6406070Z 2021-06-04T00:37:57.6440027Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-06-04T00:37:58.2992052Z Content type 'binary/octet-stream' length 65826 bytes (64 KB) 2021-06-04T00:37:58.2993509Z ================================================== 2021-06-04T00:37:58.2994171Z downloaded 64 KB 2021-06-04T00:37:58.2994626Z 2021-06-04T00:37:58.3030395Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rappdirs_0.3.3.tar.gz' 2021-06-04T00:37:58.4768302Z Content type 'binary/octet-stream' length 47325 bytes (46 KB) 2021-06-04T00:37:58.4819717Z ================================================== 2021-06-04T00:37:58.4820523Z downloaded 46 KB 2021-06-04T00:37:58.4820975Z 2021-06-04T00:37:58.4857788Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/purrr_0.3.4.tar.gz' 2021-06-04T00:37:58.6612300Z Content type 'binary/octet-stream' length 427374 bytes (417 KB) 2021-06-04T00:37:58.6810072Z ================================================== 2021-06-04T00:37:58.6810817Z downloaded 417 KB 2021-06-04T00:37:58.6811213Z 2021-06-04T00:37:58.6845337Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lifecycle_1.0.0.tar.gz' 2021-06-04T00:37:59.1884790Z Content type 'binary/octet-stream' length 93556 bytes (91 KB) 2021-06-04T00:37:59.1955398Z ================================================== 2021-06-04T00:37:59.1955961Z downloaded 91 KB 2021-06-04T00:37:59.1956247Z 2021-06-04T00:37:59.1994979Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gh_1.3.0.tar.gz' 2021-06-04T00:37:59.8148344Z Content type 'binary/octet-stream' length 136720 bytes (133 KB) 2021-06-04T00:37:59.8256704Z ================================================== 2021-06-04T00:37:59.8257414Z downloaded 133 KB 2021-06-04T00:37:59.8257838Z 2021-06-04T00:37:59.8297285Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.3.0.tar.gz' 2021-06-04T00:38:00.1077822Z Content type 'binary/octet-stream' length 278807 bytes (272 KB) 2021-06-04T00:38:00.1236664Z ================================================== 2021-06-04T00:38:00.1237480Z downloaded 272 KB 2021-06-04T00:38:00.1237906Z 2021-06-04T00:38:00.1271799Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fs_1.5.0.tar.gz' 2021-06-04T00:38:00.2971267Z Content type 'binary/octet-stream' length 754591 bytes (736 KB) 2021-06-04T00:38:00.3208461Z ================================================== 2021-06-04T00:38:00.3209251Z downloaded 736 KB 2021-06-04T00:38:00.3209652Z 2021-06-04T00:38:00.3242246Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/clipr_0.7.1.tar.gz' 2021-06-04T00:38:00.5944377Z Content type 'binary/octet-stream' length 47147 bytes (46 KB) 2021-06-04T00:38:00.5997028Z ================================================== 2021-06-04T00:38:00.5997879Z downloaded 46 KB 2021-06-04T00:38:00.5998434Z 2021-06-04T00:38:00.6030097Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cachem_1.0.5.tar.gz' 2021-06-04T00:38:00.8980644Z Content type 'binary/octet-stream' length 68425 bytes (66 KB) 2021-06-04T00:38:00.8982081Z ================================================== 2021-06-04T00:38:00.8983032Z downloaded 66 KB 2021-06-04T00:38:00.8983616Z 2021-06-04T00:38:00.9025731Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-06-04T00:38:01.9565348Z Content type 'binary/octet-stream' length 704079 bytes (687 KB) 2021-06-04T00:38:02.0804636Z ================================================== 2021-06-04T00:38:02.0805276Z downloaded 687 KB 2021-06-04T00:38:02.0805599Z 2021-06-04T00:38:02.0844855Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-06-04T00:38:02.6504895Z Content type 'binary/octet-stream' length 47070 bytes (45 KB) 2021-06-04T00:38:02.6506108Z ================================================== 2021-06-04T00:38:02.6506766Z downloaded 45 KB 2021-06-04T00:38:02.6507223Z 2021-06-04T00:38:02.6542711Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-06-04T00:38:03.3096596Z Content type 'binary/octet-stream' length 616131 bytes (601 KB) 2021-06-04T00:38:03.3372804Z ================================================== 2021-06-04T00:38:03.3373341Z downloaded 601 KB 2021-06-04T00:38:03.3373630Z 2021-06-04T00:38:03.6334218Z * installing *binary* package ‘rlang’ ... 2021-06-04T00:38:03.6397442Z * DONE (rlang) 2021-06-04T00:38:03.8606019Z * installing *binary* package ‘magrittr’ ... 2021-06-04T00:38:03.8652978Z * DONE (magrittr) 2021-06-04T00:38:04.0814232Z * installing *binary* package ‘glue’ ... 2021-06-04T00:38:04.0857035Z * DONE (glue) 2021-06-04T00:38:04.2861876Z * installing *binary* package ‘sys’ ... 2021-06-04T00:38:04.2902667Z * DONE (sys) 2021-06-04T00:38:04.4863832Z * installing *binary* package ‘mime’ ... 2021-06-04T00:38:04.4902979Z * DONE (mime) 2021-06-04T00:38:04.7924790Z * installing *binary* package ‘curl’ ... 2021-06-04T00:38:04.7989472Z * DONE (curl) 2021-06-04T00:38:05.0338819Z * installing *binary* package ‘jsonlite’ ... 2021-06-04T00:38:05.0389817Z * DONE (jsonlite) 2021-06-04T00:38:05.2317701Z * installing *binary* package ‘ini’ ... 2021-06-04T00:38:05.2355267Z * DONE (ini) 2021-06-04T00:38:05.4397555Z * installing *binary* package ‘gitcreds’ ... 2021-06-04T00:38:05.4439098Z * DONE (gitcreds) 2021-06-04T00:38:05.7069500Z * installing *binary* package ‘zip’ ... 2021-06-04T00:38:05.7138391Z * DONE (zip) 2021-06-04T00:38:05.9393468Z * installing *binary* package ‘rstudioapi’ ... 2021-06-04T00:38:05.9444512Z * DONE (rstudioapi) 2021-06-04T00:38:06.1726129Z * installing *binary* package ‘fastmap’ ... 2021-06-04T00:38:06.1772666Z * DONE (fastmap) 2021-06-04T00:38:06.4073067Z * installing *binary* package ‘yaml’ ... 2021-06-04T00:38:06.4122576Z * DONE (yaml) 2021-06-04T00:38:06.6267705Z * installing *binary* package ‘withr’ ... 2021-06-04T00:38:06.6310374Z * DONE (withr) 2021-06-04T00:38:06.8470515Z * installing *binary* package ‘whisker’ ... 2021-06-04T00:38:06.8514337Z * DONE (whisker) 2021-06-04T00:38:07.0510152Z * installing *binary* package ‘rappdirs’ ... 2021-06-04T00:38:07.0549395Z * DONE (rappdirs) 2021-06-04T00:38:07.3234121Z * installing *binary* package ‘fs’ ... 2021-06-04T00:38:07.3288147Z * DONE (fs) 2021-06-04T00:38:08.4018584Z * installing *binary* package ‘clipr’ ... 2021-06-04T00:38:08.4020122Z * DONE (clipr) 2021-06-04T00:38:08.4021127Z * installing *binary* package ‘git2r’ ... 2021-06-04T00:38:08.4021845Z * DONE (git2r) 2021-06-04T00:38:08.4022742Z * installing *binary* package ‘askpass’ ... 2021-06-04T00:38:08.4023479Z * DONE (askpass) 2021-06-04T00:38:08.4024376Z * installing *binary* package ‘cli’ ... 2021-06-04T00:38:08.4025037Z * DONE (cli) 2021-06-04T00:38:08.4462083Z * installing *binary* package ‘purrr’ ... 2021-06-04T00:38:08.4512169Z * DONE (purrr) 2021-06-04T00:38:08.6704232Z * installing *binary* package ‘lifecycle’ ... 2021-06-04T00:38:08.6750737Z * DONE (lifecycle) 2021-06-04T00:38:08.8713581Z * installing *binary* package ‘cachem’ ... 2021-06-04T00:38:08.8752593Z * DONE (cachem) 2021-06-04T00:38:09.2181768Z * installing *binary* package ‘openssl’ ... 2021-06-04T00:38:09.2256147Z * DONE (openssl) 2021-06-04T00:38:09.4212986Z * installing *binary* package ‘memoise’ ... 2021-06-04T00:38:09.4251948Z * DONE (memoise) 2021-06-04T00:38:09.6642158Z * installing *binary* package ‘httr’ ... 2021-06-04T00:38:09.6694597Z * DONE (httr) 2021-06-04T00:38:09.8791355Z * installing *binary* package ‘credentials’ ... 2021-06-04T00:38:09.8831512Z * DONE (credentials) 2021-06-04T00:38:10.0859839Z * installing *binary* package ‘gh’ ... 2021-06-04T00:38:10.0899453Z * DONE (gh) 2021-06-04T00:38:10.3117312Z * installing *binary* package ‘gert’ ... 2021-06-04T00:38:10.3160993Z * DONE (gert) 2021-06-04T00:38:10.5804167Z * installing *binary* package ‘usethis’ ... 2021-06-04T00:38:10.5871833Z * DONE (usethis) 2021-06-04T00:38:10.5933604Z 2021-06-04T00:38:10.5934591Z The downloaded source packages are in 2021-06-04T00:38:10.5935910Z ‘/tmp/Rtmpdedv7j/downloaded_packages’ 2021-06-04T00:38:10.5944363Z Running `R CMD build`... 2021-06-04T00:38:12.6020568Z * checking for file ‘/tmp/Rtmpdedv7j/remotes6d1c3f8c85f7/ropensci-tic-3b4dfb8/DESCRIPTION’ ... OK 2021-06-04T00:38:12.6022098Z * preparing ‘tic’: 2021-06-04T00:38:12.6023182Z * checking DESCRIPTION meta-information ... OK 2021-06-04T00:38:12.6024101Z * installing the package to process help pages 2021-06-04T00:38:12.6025295Z * checking for LF line-endings in source and make files and shell scripts 2021-06-04T00:38:12.6026266Z * checking for empty or unneeded directories 2021-06-04T00:38:12.6027239Z Removed empty directory ‘tic/.circleci’ 2021-06-04T00:38:12.6028215Z Removed empty directory ‘tic/pkgdown’ 2021-06-04T00:38:12.6029106Z * building ‘tic_0.10.0.tar.gz’ 2021-06-04T00:38:12.6030976Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:38:12.6031935Z (as ‘lib’ is unspecified) 2021-06-04T00:38:12.9181648Z * installing *source* package ‘tic’ ... 2021-06-04T00:38:12.9183190Z ** using staged installation 2021-06-04T00:38:12.9429429Z ** R 2021-06-04T00:38:12.9609057Z ** inst 2021-06-04T00:38:12.9640619Z ** preparing package for lazy loading 2021-06-04T00:38:13.3067594Z ** help 2021-06-04T00:38:13.4569542Z *** installing help indices 2021-06-04T00:38:13.5429970Z *** copying figures 2021-06-04T00:38:13.5434293Z ** building package indices 2021-06-04T00:38:13.8000212Z ** installing vignettes 2021-06-04T00:38:13.8044448Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:38:14.0481553Z ** testing if installed package can be loaded from final location 2021-06-04T00:38:14.3398629Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:38:14.3427010Z * DONE (tic) 2021-06-04T00:38:14.3553408Z Using github PAT from envvar GITHUB_PAT 2021-06-04T00:38:14.5508168Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-06-04T00:38:15.3864111Z desc (1.3.0 -> 7be86f2f7...) [GitHub] 2021-06-04T00:38:15.3865716Z utf8 (NA -> 1.2.1 ) [CRAN] 2021-06-04T00:38:15.3868377Z Installing 37 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, markdown, highr, stringr, stringi, Rcpp, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-06-04T00:38:15.3873346Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-06-04T00:38:15.3874121Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-06-04T00:38:15.3874857Z pillar (NA -> 1.6.1 ) [CRAN] 2021-06-04T00:38:15.3875584Z tibble (NA -> 3.1.2 ) [CRAN] 2021-06-04T00:38:15.3876303Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-06-04T00:38:15.3877036Z fansi (NA -> 0.5.0 ) [CRAN] 2021-06-04T00:38:15.3877751Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-06-04T00:38:15.3878452Z waldo (NA -> 0.2.5 ) [CRAN] 2021-06-04T00:38:15.3879308Z ps (NA -> 1.6.0 ) [CRAN] 2021-06-04T00:38:15.3880051Z processx (NA -> 3.5.2 ) [CRAN] 2021-06-04T00:38:15.3881067Z praise (NA -> 1.0.0 ) [CRAN] 2021-06-04T00:38:15.3881801Z pkgload (NA -> 1.2.1 ) [CRAN] 2021-06-04T00:38:15.3882532Z evaluate (NA -> 0.14 ) [CRAN] 2021-06-04T00:38:15.3883283Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-06-04T00:38:15.3884011Z digest (NA -> 0.6.27 ) [CRAN] 2021-06-04T00:38:15.3884705Z callr (NA -> 3.7.0 ) [CRAN] 2021-06-04T00:38:15.3885407Z brio (NA -> 1.1.2 ) [CRAN] 2021-06-04T00:38:15.3886088Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-06-04T00:38:15.3886785Z xfun (NA -> 0.23 ) [CRAN] 2021-06-04T00:38:15.3887505Z markdown (NA -> 1.1 ) [CRAN] 2021-06-04T00:38:15.3888218Z highr (NA -> 0.9 ) [CRAN] 2021-06-04T00:38:15.3888933Z stringr (NA -> 1.4.0 ) [CRAN] 2021-06-04T00:38:15.3889654Z stringi (NA -> 1.6.2 ) [CRAN] 2021-06-04T00:38:15.3890362Z Rcpp (NA -> 1.0.6 ) [CRAN] 2021-06-04T00:38:15.3891070Z knitr (NA -> 1.33 ) [CRAN] 2021-06-04T00:38:15.3891798Z commonmark (NA -> 1.7 ) [CRAN] 2021-06-04T00:38:15.3892526Z brew (NA -> 1.0-6 ) [CRAN] 2021-06-04T00:38:15.3893233Z xopen (NA -> 1.0.0 ) [CRAN] 2021-06-04T00:38:15.3893959Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-06-04T00:38:15.3894737Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-06-04T00:38:15.3895497Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-06-04T00:38:15.3896215Z testthat (NA -> 3.0.2 ) [CRAN] 2021-06-04T00:38:15.3896966Z rversions (NA -> 2.1.1 ) [CRAN] 2021-06-04T00:38:15.3897701Z roxygen2 (NA -> 7.1.1 ) [CRAN] 2021-06-04T00:38:15.3898448Z rcmdcheck (NA -> 1.3.3 ) [CRAN] 2021-06-04T00:38:15.3899190Z devtools (NA -> 2.4.1 ) [CRAN] 2021-06-04T00:38:15.3900433Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:38:15.3901624Z (as ‘lib’ is unspecified) 2021-06-04T00:38:29.2900800Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.1.tar.gz' 2021-06-04T00:38:29.5638635Z Content type 'binary/octet-stream' length 237664 bytes (232 KB) 2021-06-04T00:38:29.5790221Z ================================================== 2021-06-04T00:38:29.5790919Z downloaded 232 KB 2021-06-04T00:38:29.5791384Z 2021-06-04T00:38:29.5821709Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vctrs_0.3.8.tar.gz' 2021-06-04T00:38:29.7510020Z Content type 'binary/octet-stream' length 1621042 bytes (1.5 MB) 2021-06-04T00:38:29.7823361Z ================================================== 2021-06-04T00:38:29.7824056Z downloaded 1.5 MB 2021-06-04T00:38:29.7824455Z 2021-06-04T00:38:29.7854608Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgconfig_2.0.3.tar.gz' 2021-06-04T00:38:29.9519333Z Content type 'binary/octet-stream' length 17554 bytes (17 KB) 2021-06-04T00:38:29.9520601Z ================================================== 2021-06-04T00:38:29.9521258Z downloaded 17 KB 2021-06-04T00:38:29.9521702Z 2021-06-04T00:38:29.9547984Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pillar_1.6.1.tar.gz' 2021-06-04T00:38:30.2342248Z Content type 'binary/octet-stream' length 1011310 bytes (987 KB) 2021-06-04T00:38:30.2613812Z ================================================== 2021-06-04T00:38:30.2614739Z downloaded 987 KB 2021-06-04T00:38:30.2615285Z 2021-06-04T00:38:30.2646052Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tibble_3.1.2.tar.gz' 2021-06-04T00:38:30.5386031Z Content type 'binary/octet-stream' length 812232 bytes (793 KB) 2021-06-04T00:38:30.5802532Z ================================================== 2021-06-04T00:38:30.5803461Z downloaded 793 KB 2021-06-04T00:38:30.5803999Z 2021-06-04T00:38:30.5832087Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-06-04T00:38:30.7514645Z Content type 'binary/octet-stream' length 43984 bytes (42 KB) 2021-06-04T00:38:30.7567846Z ================================================== 2021-06-04T00:38:30.7568624Z downloaded 42 KB 2021-06-04T00:38:30.7569109Z 2021-06-04T00:38:30.7595677Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fansi_0.5.0.tar.gz' 2021-06-04T00:38:31.0480202Z Content type 'binary/octet-stream' length 281168 bytes (274 KB) 2021-06-04T00:38:31.0644799Z ================================================== 2021-06-04T00:38:31.0645313Z downloaded 274 KB 2021-06-04T00:38:31.0645602Z 2021-06-04T00:38:31.0676450Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/diffobj_0.3.4.tar.gz' 2021-06-04T00:38:31.2388073Z Content type 'binary/octet-stream' length 1003508 bytes (979 KB) 2021-06-04T00:38:31.2651709Z ================================================== 2021-06-04T00:38:31.2652255Z downloaded 979 KB 2021-06-04T00:38:31.2652545Z 2021-06-04T00:38:31.2688079Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.2.5.tar.gz' 2021-06-04T00:38:31.5503419Z Content type 'binary/octet-stream' length 69493 bytes (67 KB) 2021-06-04T00:38:31.5557917Z ================================================== 2021-06-04T00:38:31.5558420Z downloaded 67 KB 2021-06-04T00:38:31.5558703Z 2021-06-04T00:38:31.5587855Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-06-04T00:38:31.8306426Z Content type 'binary/octet-stream' length 363109 bytes (354 KB) 2021-06-04T00:38:31.8491366Z ================================================== 2021-06-04T00:38:31.8491923Z downloaded 354 KB 2021-06-04T00:38:31.8492248Z 2021-06-04T00:38:31.8525390Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-06-04T00:38:32.1326584Z Content type 'binary/octet-stream' length 423282 bytes (413 KB) 2021-06-04T00:38:32.1532522Z ================================================== 2021-06-04T00:38:32.1533298Z downloaded 413 KB 2021-06-04T00:38:32.1533775Z 2021-06-04T00:38:32.1564927Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/praise_1.0.0.tar.gz' 2021-06-04T00:38:32.3293037Z Content type 'binary/octet-stream' length 15999 bytes (15 KB) 2021-06-04T00:38:32.3293898Z ================================================== 2021-06-04T00:38:32.3294396Z downloaded 15 KB 2021-06-04T00:38:32.3294699Z 2021-06-04T00:38:32.3325385Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgload_1.2.1.tar.gz' 2021-06-04T00:38:32.6150816Z Content type 'binary/octet-stream' length 150404 bytes (146 KB) 2021-06-04T00:38:32.6259618Z ================================================== 2021-06-04T00:38:32.6260398Z downloaded 146 KB 2021-06-04T00:38:32.6260871Z 2021-06-04T00:38:32.6290584Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-06-04T00:38:32.8581424Z Content type 'binary/octet-stream' length 74183 bytes (72 KB) 2021-06-04T00:38:32.8639890Z ================================================== 2021-06-04T00:38:32.8640792Z downloaded 72 KB 2021-06-04T00:38:32.8641340Z 2021-06-04T00:38:32.8672802Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-06-04T00:38:33.3621543Z Content type 'binary/octet-stream' length 40293 bytes (39 KB) 2021-06-04T00:38:33.3631020Z ================================================== 2021-06-04T00:38:33.3631538Z downloaded 39 KB 2021-06-04T00:38:33.3631843Z 2021-06-04T00:38:33.3658538Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.27.tar.gz' 2021-06-04T00:38:33.5401309Z Content type 'binary/octet-stream' length 357387 bytes (349 KB) 2021-06-04T00:38:33.5592004Z ================================================== 2021-06-04T00:38:33.5594293Z downloaded 349 KB 2021-06-04T00:38:33.5595644Z 2021-06-04T00:38:33.5618789Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/callr_3.7.0.tar.gz' 2021-06-04T00:38:33.8399812Z Content type 'binary/octet-stream' length 436191 bytes (425 KB) 2021-06-04T00:38:33.8628472Z ================================================== 2021-06-04T00:38:33.8629329Z downloaded 425 KB 2021-06-04T00:38:33.8629897Z 2021-06-04T00:38:33.8661448Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brio_1.1.2.tar.gz' 2021-06-04T00:38:34.1370944Z Content type 'binary/octet-stream' length 42530 bytes (41 KB) 2021-06-04T00:38:34.1425453Z ================================================== 2021-06-04T00:38:34.1427653Z downloaded 41 KB 2021-06-04T00:38:34.1428750Z 2021-06-04T00:38:34.1452898Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-06-04T00:38:34.7654521Z Content type 'binary/octet-stream' length 617914 bytes (603 KB) 2021-06-04T00:38:34.7884558Z ================================================== 2021-06-04T00:38:34.7885331Z downloaded 603 KB 2021-06-04T00:38:34.7885785Z 2021-06-04T00:38:34.7916604Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xfun_0.23.tar.gz' 2021-06-04T00:38:35.2284354Z Content type 'binary/octet-stream' length 331309 bytes (323 KB) 2021-06-04T00:38:35.2454670Z ================================================== 2021-06-04T00:38:35.2455470Z downloaded 323 KB 2021-06-04T00:38:35.2455955Z 2021-06-04T00:38:35.2486997Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-06-04T00:38:36.4071830Z Content type 'binary/octet-stream' length 230462 bytes (225 KB) 2021-06-04T00:38:36.4073735Z ================================================== 2021-06-04T00:38:36.4074444Z downloaded 225 KB 2021-06-04T00:38:36.4074922Z 2021-06-04T00:38:36.4076846Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/highr_0.9.tar.gz' 2021-06-04T00:38:37.7602801Z Content type 'binary/octet-stream' length 38854 bytes (37 KB) 2021-06-04T00:38:37.7612172Z ================================================== 2021-06-04T00:38:37.7612784Z downloaded 37 KB 2021-06-04T00:38:37.7613098Z 2021-06-04T00:38:37.7651971Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringr_1.4.0.tar.gz' 2021-06-04T00:38:38.4207271Z Content type 'binary/octet-stream' length 204523 bytes (199 KB) 2021-06-04T00:38:38.4332423Z ================================================== 2021-06-04T00:38:38.4333283Z downloaded 199 KB 2021-06-04T00:38:38.4333855Z 2021-06-04T00:38:38.4370210Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringi_1.6.2.tar.gz' 2021-06-04T00:38:39.3810777Z Content type 'binary/octet-stream' length 2944002 bytes (2.8 MB) 2021-06-04T00:38:39.4582604Z ================================================== 2021-06-04T00:38:39.4583473Z downloaded 2.8 MB 2021-06-04T00:38:39.4583958Z 2021-06-04T00:38:39.4620402Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.6.tar.gz' 2021-06-04T00:38:39.7377237Z Content type 'binary/octet-stream' length 4153785 bytes (4.0 MB) 2021-06-04T00:38:39.7880323Z ================================================== 2021-06-04T00:38:39.7881199Z downloaded 4.0 MB 2021-06-04T00:38:39.7881683Z 2021-06-04T00:38:39.7913813Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/knitr_1.33.tar.gz' 2021-06-04T00:38:40.1881225Z Content type 'binary/octet-stream' length 1400044 bytes (1.3 MB) 2021-06-04T00:38:40.2200188Z ================================================== 2021-06-04T00:38:40.2200685Z downloaded 1.3 MB 2021-06-04T00:38:40.2200969Z 2021-06-04T00:38:40.2240503Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/commonmark_1.7.tar.gz' 2021-06-04T00:38:40.7655792Z Content type 'binary/octet-stream' length 491519 bytes (479 KB) 2021-06-04T00:38:40.7873237Z ================================================== 2021-06-04T00:38:40.7873728Z downloaded 479 KB 2021-06-04T00:38:40.7874036Z 2021-06-04T00:38:40.7991334Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brew_1.0-6.tar.gz' 2021-06-04T00:38:41.5090784Z Content type 'binary/octet-stream' length 109751 bytes (107 KB) 2021-06-04T00:38:41.5145277Z ================================================== 2021-06-04T00:38:41.5146156Z downloaded 107 KB 2021-06-04T00:38:41.5146704Z 2021-06-04T00:38:41.5184564Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xopen_1.0.0.tar.gz' 2021-06-04T00:38:43.8670465Z Content type 'binary/octet-stream' length 22104 bytes (21 KB) 2021-06-04T00:38:43.8671240Z ================================================== 2021-06-04T00:38:43.8671719Z downloaded 21 KB 2021-06-04T00:38:43.8672034Z 2021-06-04T00:38:43.8706999Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sessioninfo_1.1.1.tar.gz' 2021-06-04T00:38:44.3047128Z Content type 'binary/octet-stream' length 44271 bytes (43 KB) 2021-06-04T00:38:44.3097461Z ================================================== 2021-06-04T00:38:44.3098331Z downloaded 43 KB 2021-06-04T00:38:44.3098883Z 2021-06-04T00:38:44.3134223Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/prettyunits_1.1.1.tar.gz' 2021-06-04T00:38:46.2699540Z Content type 'binary/octet-stream' length 34357 bytes (33 KB) 2021-06-04T00:38:46.2700819Z ================================================== 2021-06-04T00:38:46.2701765Z downloaded 33 KB 2021-06-04T00:38:46.2702139Z 2021-06-04T00:38:46.2738078Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgbuild_1.2.0.tar.gz' 2021-06-04T00:38:46.4480709Z Content type 'binary/octet-stream' length 140417 bytes (137 KB) 2021-06-04T00:38:46.4601375Z ================================================== 2021-06-04T00:38:46.4602308Z downloaded 137 KB 2021-06-04T00:38:46.4602869Z 2021-06-04T00:38:46.4629411Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/testthat_3.0.2.tar.gz' 2021-06-04T00:38:46.7416195Z Content type 'binary/octet-stream' length 3551345 bytes (3.4 MB) 2021-06-04T00:38:46.8446809Z ================================================== 2021-06-04T00:38:46.8448031Z downloaded 3.4 MB 2021-06-04T00:38:46.8448579Z 2021-06-04T00:38:46.8477445Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.1.1.tar.gz' 2021-06-04T00:38:49.4055546Z Content type 'binary/octet-stream' length 64148 bytes (62 KB) 2021-06-04T00:38:49.4057026Z ================================================== 2021-06-04T00:38:49.4057758Z downloaded 62 KB 2021-06-04T00:38:49.4058290Z 2021-06-04T00:38:49.4091148Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/roxygen2_7.1.1.tar.gz' 2021-06-04T00:38:49.9634912Z Content type 'binary/octet-stream' length 1374258 bytes (1.3 MB) 2021-06-04T00:38:49.9937353Z ================================================== 2021-06-04T00:38:49.9937909Z downloaded 1.3 MB 2021-06-04T00:38:49.9938189Z 2021-06-04T00:38:49.9974592Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rcmdcheck_1.3.3.tar.gz' 2021-06-04T00:38:50.3586742Z Content type 'binary/octet-stream' length 132329 bytes (129 KB) 2021-06-04T00:38:50.3698308Z ================================================== 2021-06-04T00:38:50.3698845Z downloaded 129 KB 2021-06-04T00:38:50.3699142Z 2021-06-04T00:38:50.3733841Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.1.tar.gz' 2021-06-04T00:38:50.9113992Z Content type 'binary/octet-stream' length 394833 bytes (385 KB) 2021-06-04T00:38:50.9304570Z ================================================== 2021-06-04T00:38:50.9305063Z downloaded 385 KB 2021-06-04T00:38:50.9305349Z 2021-06-04T00:38:51.1593762Z * installing *binary* package ‘utf8’ ... 2021-06-04T00:38:51.1638213Z * DONE (utf8) 2021-06-04T00:38:51.3575258Z * installing *binary* package ‘pkgconfig’ ... 2021-06-04T00:38:51.3613906Z * DONE (pkgconfig) 2021-06-04T00:38:51.5834526Z * installing *binary* package ‘fansi’ ... 2021-06-04T00:38:51.5880112Z * DONE (fansi) 2021-06-04T00:38:51.8374803Z * installing *binary* package ‘diffobj’ ... 2021-06-04T00:38:51.8425207Z * DONE (diffobj) 2021-06-04T00:38:52.0686178Z * installing *binary* package ‘ps’ ... 2021-06-04T00:38:52.0733638Z * DONE (ps) 2021-06-04T00:38:52.2684882Z * installing *binary* package ‘praise’ ... 2021-06-04T00:38:52.2723192Z * DONE (praise) 2021-06-04T00:38:52.4702905Z * installing *binary* package ‘pkgload’ ... 2021-06-04T00:38:52.4742931Z * DONE (pkgload) 2021-06-04T00:38:52.6746561Z * installing *binary* package ‘evaluate’ ... 2021-06-04T00:38:52.6784755Z * DONE (evaluate) 2021-06-04T00:38:52.8791358Z * installing *binary* package ‘ellipsis’ ... 2021-06-04T00:38:52.8829918Z * DONE (ellipsis) 2021-06-04T00:38:53.1293098Z * installing *binary* package ‘digest’ ... 2021-06-04T00:38:53.1349056Z * DONE (digest) 2021-06-04T00:38:53.3328614Z * installing *binary* package ‘brio’ ... 2021-06-04T00:38:53.3374782Z * DONE (brio) 2021-06-04T00:38:53.6034620Z * installing *binary* package ‘xml2’ ... 2021-06-04T00:38:53.6091550Z * DONE (xml2) 2021-06-04T00:38:53.8321954Z * installing *binary* package ‘xfun’ ... 2021-06-04T00:38:53.8367489Z * DONE (xfun) 2021-06-04T00:38:54.2850294Z * installing *binary* package ‘stringi’ ... 2021-06-04T00:38:54.2949843Z * DONE (stringi) 2021-06-04T00:38:55.3450549Z * installing *binary* package ‘Rcpp’ ... 2021-06-04T00:38:55.3825967Z * DONE (Rcpp) 2021-06-04T00:38:55.6501911Z * installing *binary* package ‘commonmark’ ... 2021-06-04T00:38:55.6555109Z * DONE (commonmark) 2021-06-04T00:38:55.8885495Z * installing *binary* package ‘brew’ ... 2021-06-04T00:38:55.8937369Z * DONE (brew) 2021-06-04T00:38:56.0879734Z * installing *binary* package ‘sessioninfo’ ... 2021-06-04T00:38:56.0917770Z * DONE (sessioninfo) 2021-06-04T00:38:56.2842866Z * installing *binary* package ‘prettyunits’ ... 2021-06-04T00:38:56.2880941Z * DONE (prettyunits) 2021-06-04T00:38:56.6216162Z * installing *binary* package ‘vctrs’ ... 2021-06-04T00:38:56.6295814Z * DONE (vctrs) 2021-06-04T00:38:56.8564575Z * installing *binary* package ‘processx’ ... 2021-06-04T00:38:56.8611406Z * DONE (processx) 2021-06-04T00:38:57.0914875Z * installing *binary* package ‘markdown’ ... 2021-06-04T00:38:57.0966285Z * DONE (markdown) 2021-06-04T00:38:57.2977527Z * installing *binary* package ‘highr’ ... 2021-06-04T00:38:57.3017221Z * DONE (highr) 2021-06-04T00:38:57.5231871Z * installing *binary* package ‘stringr’ ... 2021-06-04T00:38:57.5280942Z * DONE (stringr) 2021-06-04T00:38:57.7294869Z * installing *binary* package ‘rversions’ ... 2021-06-04T00:38:57.7334335Z * DONE (rversions) 2021-06-04T00:38:58.0249506Z * installing *binary* package ‘pillar’ ... 2021-06-04T00:38:58.0314244Z * DONE (pillar) 2021-06-04T00:38:58.2562775Z * installing *binary* package ‘callr’ ... 2021-06-04T00:38:58.2605276Z * DONE (callr) 2021-06-04T00:38:58.6455431Z * installing *binary* package ‘knitr’ ... 2021-06-04T00:38:58.6564175Z * DONE (knitr) 2021-06-04T00:38:58.8612759Z * installing *binary* package ‘xopen’ ... 2021-06-04T00:38:58.8652344Z * DONE (xopen) 2021-06-04T00:38:59.1581520Z * installing *binary* package ‘tibble’ ... 2021-06-04T00:38:59.1645676Z * DONE (tibble) 2021-06-04T00:38:59.3706313Z * installing *binary* package ‘pkgbuild’ ... 2021-06-04T00:38:59.3742188Z * DONE (pkgbuild) 2021-06-04T00:38:59.7138645Z * installing *binary* package ‘roxygen2’ ... 2021-06-04T00:38:59.7215651Z * DONE (roxygen2) 2021-06-04T00:38:59.9211332Z * installing *binary* package ‘rematch2’ ... 2021-06-04T00:38:59.9249413Z * DONE (rematch2) 2021-06-04T00:39:00.1291192Z * installing *binary* package ‘rcmdcheck’ ... 2021-06-04T00:39:00.1331098Z * DONE (rcmdcheck) 2021-06-04T00:39:00.3349726Z * installing *binary* package ‘waldo’ ... 2021-06-04T00:39:00.3388819Z * DONE (waldo) 2021-06-04T00:39:00.9171126Z * installing *binary* package ‘testthat’ ... 2021-06-04T00:39:00.9313678Z * DONE (testthat) 2021-06-04T00:39:01.1658080Z * installing *binary* package ‘devtools’ ... 2021-06-04T00:39:01.1704414Z * DONE (devtools) 2021-06-04T00:39:01.1760785Z 2021-06-04T00:39:01.1761783Z The downloaded source packages are in 2021-06-04T00:39:01.1763111Z ‘/tmp/Rtmpdedv7j/downloaded_packages’ 2021-06-04T00:39:01.2892314Z Downloading GitHub repo muschellij2/desc@HEAD 2021-06-04T00:39:02.1821010Z 2021-06-04T00:39:02.4653311Z 2021-06-04T00:39:02.4657420Z checking for file ‘/tmp/Rtmpdedv7j/remotes6d1c231902ce/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-06-04T00:39:02.4718301Z 2021-06-04T00:39:02.4720370Z ✔ checking for file ‘/tmp/Rtmpdedv7j/remotes6d1c231902ce/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-06-04T00:39:02.4802145Z 2021-06-04T00:39:02.4802674Z 2021-06-04T00:39:02.4803449Z ─ preparing ‘desc’: 2021-06-04T00:39:02.4803745Z 2021-06-04T00:39:02.4804056Z 2021-06-04T00:39:02.4902204Z checking DESCRIPTION meta-information ... 2021-06-04T00:39:02.4923661Z 2021-06-04T00:39:02.4925051Z ✔ checking DESCRIPTION meta-information 2021-06-04T00:39:02.5555181Z 2021-06-04T00:39:02.5580281Z 2021-06-04T00:39:02.5582171Z ─ checking for LF line-endings in source and make files and shell scripts 2021-06-04T00:39:02.5728515Z 2021-06-04T00:39:02.5753315Z 2021-06-04T00:39:02.5754876Z ─ checking for empty or unneeded directories 2021-06-04T00:39:02.5756188Z Omitted ‘LazyData’ from DESCRIPTION 2021-06-04T00:39:02.5777878Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-06-04T00:39:02.6714853Z 2021-06-04T00:39:02.6717936Z 2021-06-04T00:39:02.6719720Z 2021-06-04T00:39:02.6810941Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:39:02.6812052Z (as ‘lib’ is unspecified) 2021-06-04T00:39:02.9692408Z * installing *source* package ‘desc’ ... 2021-06-04T00:39:02.9721534Z ** using staged installation 2021-06-04T00:39:02.9880358Z ** R 2021-06-04T00:39:03.0003103Z ** inst 2021-06-04T00:39:03.0018325Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:39:04.4520185Z ** help 2021-06-04T00:39:04.5722296Z *** installing help indices 2021-06-04T00:39:04.6575164Z ** building package indices 2021-06-04T00:39:04.9097188Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:39:05.0836136Z ** testing if installed package can be loaded from final location 2021-06-04T00:39:05.2860836Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:39:05.2879633Z * DONE (desc) 2021-06-04T00:39:05.4739982Z 2021-06-04T00:39:05.4740657Z 2021-06-04T00:39:05.4781930Z checking for file ‘/tmp/Rtmpdedv7j/remotes6d1c221a8353/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-06-04T00:39:05.4782836Z 2021-06-04T00:39:05.4784036Z ✔ checking for file ‘/tmp/Rtmpdedv7j/remotes6d1c221a8353/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-06-04T00:39:05.4881923Z 2021-06-04T00:39:05.4882469Z 2021-06-04T00:39:05.4883410Z ─ preparing ‘ghtravis’: 2021-06-04T00:39:05.4883745Z 2021-06-04T00:39:05.4884064Z 2021-06-04T00:39:05.4957246Z checking DESCRIPTION meta-information ... 2021-06-04T00:39:05.4981191Z 2021-06-04T00:39:05.4983136Z ✔ checking DESCRIPTION meta-information 2021-06-04T00:39:05.5327242Z 2021-06-04T00:39:05.5354681Z 2021-06-04T00:39:05.5357147Z ─ checking for LF line-endings in source and make files and shell scripts 2021-06-04T00:39:05.5366446Z 2021-06-04T00:39:05.5390984Z 2021-06-04T00:39:05.5392927Z ─ checking for empty or unneeded directories 2021-06-04T00:39:05.5395785Z Omitted ‘LazyData’ from DESCRIPTION 2021-06-04T00:39:05.5459521Z 2021-06-04T00:39:05.5484169Z 2021-06-04T00:39:05.5486074Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-06-04T00:39:05.5677688Z 2021-06-04T00:39:05.5680503Z 2021-06-04T00:39:05.5682036Z 2021-06-04T00:39:05.6029780Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:39:05.6030564Z (as ‘lib’ is unspecified) 2021-06-04T00:39:05.8268594Z * installing *source* package ‘ghtravis’ ... 2021-06-04T00:39:05.8270379Z ** using staged installation 2021-06-04T00:39:05.8406789Z ** R 2021-06-04T00:39:05.8486888Z ** inst 2021-06-04T00:39:05.8495418Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:39:06.9363040Z ** help 2021-06-04T00:39:06.9909751Z *** installing help indices 2021-06-04T00:39:07.0312303Z ** building package indices 2021-06-04T00:39:07.2446664Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:39:07.8540858Z ** testing if installed package can be loaded from final location 2021-06-04T00:39:08.4751854Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:39:08.4762363Z * DONE (ghtravis) 2021-06-04T00:39:08.4847874Z Using github PAT from envvar GITHUB_PAT 2021-06-04T00:39:08.6471367Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-06-04T00:39:09.5709904Z 2021-06-04T00:39:09.5712023Z tidyselect (NA -> 1.1.1) [CRAN] 2021-06-04T00:39:09.5712985Z Installing 5 packages: tidyselect, generics, cpp11, dplyr, tidyr 2021-06-04T00:39:09.5714242Z generics (NA -> 0.1.0) [CRAN] 2021-06-04T00:39:09.5715198Z cpp11 (NA -> 0.2.7) [CRAN] 2021-06-04T00:39:09.5716105Z dplyr (NA -> 1.0.6) [CRAN] 2021-06-04T00:39:09.5716989Z tidyr (NA -> 1.1.3) [CRAN] 2021-06-04T00:39:09.5721792Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:39:09.5722912Z (as ‘lib’ is unspecified) 2021-06-04T00:39:23.5830939Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-06-04T00:39:23.9051407Z Content type 'binary/octet-stream' length 198868 bytes (194 KB) 2021-06-04T00:39:23.9189993Z ================================================== 2021-06-04T00:39:23.9190507Z downloaded 194 KB 2021-06-04T00:39:23.9190791Z 2021-06-04T00:39:23.9225709Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-06-04T00:39:24.3670647Z Content type 'binary/octet-stream' length 68868 bytes (67 KB) 2021-06-04T00:39:24.3671431Z ================================================== 2021-06-04T00:39:24.3671911Z downloaded 67 KB 2021-06-04T00:39:24.3672230Z 2021-06-04T00:39:24.3713648Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.2.7.tar.gz' 2021-06-04T00:39:24.6410241Z Content type 'binary/octet-stream' length 195847 bytes (191 KB) 2021-06-04T00:39:24.6546486Z ================================================== 2021-06-04T00:39:24.6547489Z downloaded 191 KB 2021-06-04T00:39:24.6547869Z 2021-06-04T00:39:24.6585934Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.6.tar.gz' 2021-06-04T00:39:25.6024137Z Content type 'binary/octet-stream' length 1245501 bytes (1.2 MB) 2021-06-04T00:39:25.7160983Z ================================================== 2021-06-04T00:39:25.7161645Z downloaded 1.2 MB 2021-06-04T00:39:25.7161977Z 2021-06-04T00:39:25.7280944Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.3.tar.gz' 2021-06-04T00:39:26.0053706Z Content type 'binary/octet-stream' length 1083669 bytes (1.0 MB) 2021-06-04T00:39:26.0309147Z ================================================== 2021-06-04T00:39:26.0309653Z downloaded 1.0 MB 2021-06-04T00:39:26.0309936Z 2021-06-04T00:39:26.2509646Z * installing *binary* package ‘tidyselect’ ... 2021-06-04T00:39:26.2552390Z * DONE (tidyselect) 2021-06-04T00:39:26.4526633Z * installing *binary* package ‘generics’ ... 2021-06-04T00:39:26.4564218Z * DONE (generics) 2021-06-04T00:39:26.6981611Z * installing *binary* package ‘cpp11’ ... 2021-06-04T00:39:26.7038278Z * DONE (cpp11) 2021-06-04T00:39:26.9981905Z * installing *binary* package ‘dplyr’ ... 2021-06-04T00:39:27.0051158Z * DONE (dplyr) 2021-06-04T00:39:27.3000224Z * installing *binary* package ‘tidyr’ ... 2021-06-04T00:39:27.3071164Z * DONE (tidyr) 2021-06-04T00:39:27.3132252Z 2021-06-04T00:39:27.3133279Z The downloaded source packages are in 2021-06-04T00:39:27.3134815Z ‘/tmp/Rtmpdedv7j/downloaded_packages’ 2021-06-04T00:39:27.4894600Z 2021-06-04T00:39:27.4900149Z checking for file ‘/tmp/Rtmpdedv7j/remotes6d1c4b5678f/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-06-04T00:39:27.4901262Z 2021-06-04T00:39:27.4911287Z checking for file ‘/tmp/Rtmpdedv7j/remotes6d1c4b5678f/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-06-04T00:39:27.4946015Z 2021-06-04T00:39:27.4947649Z ✔ checking for file ‘/tmp/Rtmpdedv7j/remotes6d1c4b5678f/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-06-04T00:39:27.5046520Z 2021-06-04T00:39:27.5046931Z 2021-06-04T00:39:27.5047655Z ─ preparing ‘aghast’: 2021-06-04T00:39:27.5047954Z 2021-06-04T00:39:27.5048251Z 2021-06-04T00:39:27.5114376Z checking DESCRIPTION meta-information ... 2021-06-04T00:39:27.5144952Z 2021-06-04T00:39:27.5146915Z ✔ checking DESCRIPTION meta-information 2021-06-04T00:39:27.5365397Z 2021-06-04T00:39:27.5390478Z 2021-06-04T00:39:27.5392933Z ─ checking for LF line-endings in source and make files and shell scripts 2021-06-04T00:39:27.5401775Z 2021-06-04T00:39:27.5425655Z 2021-06-04T00:39:27.5427573Z ─ checking for empty or unneeded directories 2021-06-04T00:39:27.5430418Z Omitted ‘LazyData’ from DESCRIPTION 2021-06-04T00:39:27.5440734Z 2021-06-04T00:39:27.5461759Z 2021-06-04T00:39:27.5463587Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-06-04T00:39:27.5545130Z 2021-06-04T00:39:27.5547149Z 2021-06-04T00:39:27.5548430Z 2021-06-04T00:39:27.5614389Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:39:27.5615438Z (as ‘lib’ is unspecified) 2021-06-04T00:39:27.7542737Z * installing *source* package ‘aghast’ ... 2021-06-04T00:39:27.7544182Z ** using staged installation 2021-06-04T00:39:27.7697598Z ** R 2021-06-04T00:39:27.7749770Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:39:28.1742083Z ** help 2021-06-04T00:39:28.2041068Z *** installing help indices 2021-06-04T00:39:28.2252306Z ** building package indices 2021-06-04T00:39:28.4112500Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:39:28.5784230Z ** testing if installed package can be loaded from final location 2021-06-04T00:39:28.7466715Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:39:28.7473634Z * DONE (aghast) 2021-06-04T00:39:28.7592837Z Installing 1 packages: covr 2021-06-04T00:39:28.7594244Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:39:28.7595004Z (as ‘lib’ is unspecified) 2021-06-04T00:39:42.4841493Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-06-04T00:39:42.4842032Z 2021-06-04T00:39:42.4849971Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-06-04T00:39:43.2905836Z Content type 'binary/octet-stream' length 163844 bytes (160 KB) 2021-06-04T00:39:43.3023573Z ================================================== 2021-06-04T00:39:43.3024214Z downloaded 160 KB 2021-06-04T00:39:43.3024542Z 2021-06-04T00:39:43.3062060Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-06-04T00:39:43.9057902Z Content type 'binary/octet-stream' length 121270 bytes (118 KB) 2021-06-04T00:39:43.9162264Z ================================================== 2021-06-04T00:39:43.9162778Z downloaded 118 KB 2021-06-04T00:39:43.9163060Z 2021-06-04T00:39:43.9206816Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-06-04T00:39:44.4642079Z Content type 'binary/octet-stream' length 289076 bytes (282 KB) 2021-06-04T00:39:44.4802919Z ================================================== 2021-06-04T00:39:44.4803468Z downloaded 282 KB 2021-06-04T00:39:44.4803795Z 2021-06-04T00:39:44.6967216Z * installing *binary* package ‘lazyeval’ ... 2021-06-04T00:39:44.7012833Z * DONE (lazyeval) 2021-06-04T00:39:44.9077836Z * installing *binary* package ‘rex’ ... 2021-06-04T00:39:44.9120285Z * DONE (rex) 2021-06-04T00:39:45.1425574Z * installing *binary* package ‘covr’ ... 2021-06-04T00:39:45.1479783Z * DONE (covr) 2021-06-04T00:39:45.1538303Z 2021-06-04T00:39:45.1539354Z The downloaded source packages are in 2021-06-04T00:39:45.1540637Z ‘/tmp/Rtmpdedv7j/downloaded_packages’ 2021-06-04T00:39:45.1685711Z 2021-06-04T00:39:45.1720179Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-06-04T00:39:45.1720933Z remotes::install_deps(dependencies = TRUE) 2021-06-04T00:39:45.1721528Z remotes::install_cran("rcmdcheck") 2021-06-04T00:39:45.1722060Z remotes::install_cran("markdown") 2021-06-04T00:39:45.1728855Z shell: /usr/local/bin/Rscript {0} 2021-06-04T00:39:45.1729263Z env: 2021-06-04T00:39:45.1729701Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:39:45.1730151Z TIC_DEPLOY_KEY: 2021-06-04T00:39:45.1730922Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:39:45.1732510Z GITHUB_PAT: *** 2021-06-04T00:39:45.1733389Z COVERALLS_TOKEN: *** 2021-06-04T00:39:45.1733886Z continue-on-error: false 2021-06-04T00:39:45.1734351Z VDIFFR_RUN_TESTS: 2021-06-04T00:39:45.1734810Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:39:45.1735244Z TZ: UTC 2021-06-04T00:39:45.1735613Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:39:45.1736048Z NOT_CRAN: true 2021-06-04T00:39:45.1736423Z ##[endgroup] 2021-06-04T00:40:02.3084044Z BiocParallel (NA -> 51150a511...) [Bioc] 2021-06-04T00:40:02.3085625Z neuroComb... (NA -> a68005cec...) [GitHub] 2021-06-04T00:40:02.3086735Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-06-04T00:40:02.3087763Z tinytex (NA -> 0.32 ) [CRAN] 2021-06-04T00:40:02.3088803Z htmltools (NA -> 0.5.1.1 ) [CRAN] 2021-06-04T00:40:02.3089776Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-06-04T00:40:02.3090722Z formatR (NA -> 1.11 ) [CRAN] 2021-06-04T00:40:02.3091702Z futile.op... (NA -> 1.0.1 ) [CRAN] 2021-06-04T00:40:02.3092692Z lambda.r (NA -> 1.2.4 ) [CRAN] 2021-06-04T00:40:02.3093671Z BiocManager (NA -> 1.30.15 ) [CRAN] 2021-06-04T00:40:02.3094681Z bookdown (NA -> 0.22 ) [CRAN] 2021-06-04T00:40:02.3095666Z BH (NA -> 1.75.0-0 ) [CRAN] 2021-06-04T00:40:02.3096564Z snow (NA -> 0.4-3 ) [CRAN] 2021-06-04T00:40:02.3097539Z futile.lo... (NA -> 1.4.3 ) [CRAN] 2021-06-04T00:40:02.3098523Z BiocStyle (NA -> 2.20.0 ) [CRAN] 2021-06-04T00:40:02.3099497Z matrixStats (NA -> 0.59.0 ) [CRAN] 2021-06-04T00:40:02.4916423Z Downloading Bioconductor repo https://git.bioconductor.org/packages/BiocParallel 2021-06-04T00:40:04.1171552Z formatR (NA -> 1.11 ) [CRAN] 2021-06-04T00:40:04.1173093Z futile.op... (NA -> 1.0.1 ) [CRAN] 2021-06-04T00:40:04.1174156Z lambda.r (NA -> 1.2.4 ) [CRAN] 2021-06-04T00:40:04.1175200Z BH (NA -> 1.75.0-0) [CRAN] 2021-06-04T00:40:04.1176109Z snow (NA -> 0.4-3 ) [CRAN] 2021-06-04T00:40:04.1177090Z futile.lo... (NA -> 1.4.3 ) [CRAN] 2021-06-04T00:40:04.1195890Z Installing 6 packages: formatR, futile.options, lambda.r, BH, snow, futile.logger 2021-06-04T00:40:04.1209188Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:40:04.1210280Z (as ‘lib’ is unspecified) 2021-06-04T00:40:18.6471131Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/formatR_1.11.tar.gz' 2021-06-04T00:40:19.3022917Z Content type 'binary/octet-stream' length 145046 bytes (141 KB) 2021-06-04T00:40:19.3228884Z ================================================== 2021-06-04T00:40:19.3231105Z downloaded 141 KB 2021-06-04T00:40:19.3232304Z 2021-06-04T00:40:19.3268744Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/futile.options_1.0.1.tar.gz' 2021-06-04T00:40:20.1791376Z Content type 'binary/octet-stream' length 17999 bytes (17 KB) 2021-06-04T00:40:20.1792199Z ================================================== 2021-06-04T00:40:20.1792686Z downloaded 17 KB 2021-06-04T00:40:20.1793007Z 2021-06-04T00:40:20.1836285Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lambda.r_1.2.4.tar.gz' 2021-06-04T00:40:22.5924730Z Content type 'binary/octet-stream' length 109661 bytes (107 KB) 2021-06-04T00:40:22.6035818Z ================================================== 2021-06-04T00:40:22.6037700Z downloaded 107 KB 2021-06-04T00:40:22.6038539Z 2021-06-04T00:40:22.6085300Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/BH_1.75.0-0.tar.gz' 2021-06-04T00:40:24.3543915Z Content type 'binary/octet-stream' length 11881010 bytes (11.3 MB) 2021-06-04T00:40:24.7377616Z ================================================== 2021-06-04T00:40:24.7378615Z downloaded 11.3 MB 2021-06-04T00:40:24.7379175Z 2021-06-04T00:40:24.7419247Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/snow_0.4-3.tar.gz' 2021-06-04T00:40:26.0212271Z Content type 'binary/octet-stream' length 105861 bytes (103 KB) 2021-06-04T00:40:26.0413103Z ================================================== 2021-06-04T00:40:26.0414598Z downloaded 103 KB 2021-06-04T00:40:26.0415428Z 2021-06-04T00:40:26.0463702Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/futile.logger_1.4.3.tar.gz' 2021-06-04T00:40:27.0948148Z Content type 'binary/octet-stream' length 99347 bytes (97 KB) 2021-06-04T00:40:27.1059959Z ================================================== 2021-06-04T00:40:27.1060858Z downloaded 97 KB 2021-06-04T00:40:27.1061383Z 2021-06-04T00:40:27.3216141Z * installing *binary* package ‘formatR’ ... 2021-06-04T00:40:27.3259610Z * DONE (formatR) 2021-06-04T00:40:27.5169074Z * installing *binary* package ‘futile.options’ ... 2021-06-04T00:40:27.5205274Z * DONE (futile.options) 2021-06-04T00:40:38.2206960Z * installing *binary* package ‘BH’ ... 2021-06-04T00:40:38.6806470Z * DONE (BH) 2021-06-04T00:40:39.0546311Z * installing *binary* package ‘snow’ ... 2021-06-04T00:40:39.0590242Z * DONE (snow) 2021-06-04T00:40:39.2568248Z * installing *binary* package ‘lambda.r’ ... 2021-06-04T00:40:39.2606294Z * DONE (lambda.r) 2021-06-04T00:40:39.4581856Z * installing *binary* package ‘futile.logger’ ... 2021-06-04T00:40:39.4617385Z * DONE (futile.logger) 2021-06-04T00:40:39.4667199Z 2021-06-04T00:40:39.4668042Z The downloaded source packages are in 2021-06-04T00:40:39.4669315Z ‘/tmp/RtmpSUJ7JR/downloaded_packages’ 2021-06-04T00:40:39.6560949Z 2021-06-04T00:40:39.6562764Z checking for file ‘/tmp/RtmpSUJ7JR/file74521e4e506/DESCRIPTION’ ... 2021-06-04T00:40:39.6620897Z 2021-06-04T00:40:39.6622134Z ✔ checking for file ‘/tmp/RtmpSUJ7JR/file74521e4e506/DESCRIPTION’ 2021-06-04T00:40:39.6754753Z 2021-06-04T00:40:39.6755534Z 2021-06-04T00:40:39.6756514Z ─ preparing ‘BiocParallel’: 2021-06-04T00:40:39.6757051Z 2021-06-04T00:40:39.6757544Z 2021-06-04T00:40:39.6871855Z checking DESCRIPTION meta-information ... 2021-06-04T00:40:39.6895709Z 2021-06-04T00:40:39.6897680Z ✔ checking DESCRIPTION meta-information 2021-06-04T00:40:39.6921522Z ─ cleaning src 2021-06-04T00:40:39.6929305Z 2021-06-04T00:40:39.6950645Z 2021-06-04T00:40:39.6952407Z ─ running ‘cleanup’ 2021-06-04T00:40:39.7479814Z 2021-06-04T00:40:39.7505454Z 2021-06-04T00:40:39.7507711Z ─ checking for LF line-endings in source and make files and shell scripts 2021-06-04T00:40:39.7518460Z 2021-06-04T00:40:39.7540013Z 2021-06-04T00:40:39.7541963Z ─ checking for empty or unneeded directories 2021-06-04T00:40:39.7570334Z 2021-06-04T00:40:39.7592024Z 2021-06-04T00:40:39.7593913Z ─ building ‘BiocParallel_1.26.0.tar.gz’ 2021-06-04T00:40:39.8299294Z 2021-06-04T00:40:39.8301822Z 2021-06-04T00:40:39.8303319Z 2021-06-04T00:40:39.8382782Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:40:39.8383844Z (as ‘lib’ is unspecified) 2021-06-04T00:40:40.0909034Z * installing *source* package ‘BiocParallel’ ... 2021-06-04T00:40:40.0910476Z ** using staged installation 2021-06-04T00:40:40.2081522Z 2021-06-04T00:40:40.2087108Z checking for gcc... gcc 2021-06-04T00:40:40.2652090Z checking whether the C compiler works... yes 2021-06-04T00:40:40.2653305Z checking for C compiler default output file name... a.out 2021-06-04T00:40:40.2986240Z checking for suffix of executables... 2021-06-04T00:40:40.3430665Z checking whether we are cross compiling... no 2021-06-04T00:40:40.3638568Z checking for suffix of object files... o 2021-06-04T00:40:40.3824916Z checking whether we are using the GNU C compiler... yes 2021-06-04T00:40:40.4015839Z checking whether gcc accepts -g... yes 2021-06-04T00:40:40.4387936Z checking for gcc option to accept ISO C89... none needed 2021-06-04T00:40:40.4759311Z checking for shm_open in -lrt... yes 2021-06-04T00:40:40.4947623Z configure: creating ./config.status 2021-06-04T00:40:40.5666598Z config.status: creating src/Makevars 2021-06-04T00:40:40.6158639Z ** libs 2021-06-04T00:40:40.6211060Z g++ -std=gnu++11 -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/BH/include' -I/usr/local/include -fpic -g -O2 -c ipcmutex.cpp -o ipcmutex.o 2021-06-04T00:40:46.1932278Z g++ -std=gnu++11 -shared -L/opt/R/4.1.0/lib/R/lib -L/usr/local/lib -o BiocParallel.so ipcmutex.o -lrt -L/opt/R/4.1.0/lib/R/lib -lR 2021-06-04T00:40:46.2751757Z installing to /home/runner/work/_temp/Library/00LOCK-BiocParallel/00new/BiocParallel/libs 2021-06-04T00:40:46.2794524Z ** R 2021-06-04T00:40:46.2933369Z ** inst 2021-06-04T00:40:46.2953183Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:40:49.1989875Z ** help 2021-06-04T00:40:49.3309759Z *** installing help indices 2021-06-04T00:40:49.4027214Z ** building package indices 2021-06-04T00:40:49.6384515Z ** installing vignettes 2021-06-04T00:40:49.6425641Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:40:49.8924154Z ** checking absolute paths in shared objects and dynamic libraries 2021-06-04T00:40:49.9434259Z ** testing if installed package can be loaded from final location 2021-06-04T00:40:50.2514730Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:40:50.2563000Z * DONE (BiocParallel) 2021-06-04T00:40:50.4368539Z Downloading GitHub repo neuroconductor/neuroCombatData@a68005cec61d0f6252d7c9da963f8760bd809747 2021-06-04T00:40:51.4540165Z matrixStats (NA -> 0.59.0 ) [CRAN] 2021-06-04T00:40:51.4543113Z Installing 15 packages: matrixStats, IRanges, S4Vectors, MatrixGenerics, BiocGenerics, bitops, GenomeInfoDbData, RCurl, zlibbioc, XVector, GenomeInfoDb, DelayedArray, Biobase, GenomicRanges, SummarizedExperiment 2021-06-04T00:40:51.4545025Z IRanges (NA -> 2.26.0 ) [CRAN] 2021-06-04T00:40:51.4546082Z S4Vectors (NA -> 0.30.0 ) [CRAN] 2021-06-04T00:40:51.4546988Z MatrixGen... (NA -> 1.4.0 ) [CRAN] 2021-06-04T00:40:51.4548820Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:40:51.4549714Z BiocGenerics (NA -> 0.38.0 ) [CRAN] 2021-06-04T00:40:51.4551227Z (as ‘lib’ is unspecified) 2021-06-04T00:40:51.4551973Z bitops (NA -> 1.0-7 ) [CRAN] 2021-06-04T00:40:51.4552941Z GenomeInf... (NA -> 1.2.6 ) [CRAN] 2021-06-04T00:40:51.4553859Z RCurl (NA -> 1.98-1.3) [CRAN] 2021-06-04T00:40:51.4554723Z zlibbioc (NA -> 1.38.0 ) [CRAN] 2021-06-04T00:40:51.4555594Z XVector (NA -> 0.32.0 ) [CRAN] 2021-06-04T00:40:51.4556480Z GenomeInfoDb (NA -> 1.28.0 ) [CRAN] 2021-06-04T00:40:51.4557430Z DelayedArray (NA -> 0.18.0 ) [CRAN] 2021-06-04T00:40:51.4558309Z Biobase (NA -> 2.52.0 ) [CRAN] 2021-06-04T00:40:51.4559377Z GenomicRa... (NA -> 1.44.0 ) [CRAN] 2021-06-04T00:40:51.4560316Z Summarize... (NA -> 1.22.0 ) [CRAN] 2021-06-04T00:41:06.0355881Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.59.0.tar.gz' 2021-06-04T00:41:08.7954600Z Content type 'binary/octet-stream' length 2549027 bytes (2.4 MB) 2021-06-04T00:41:08.8800148Z ================================================== 2021-06-04T00:41:08.8801069Z downloaded 2.4 MB 2021-06-04T00:41:08.8801667Z 2021-06-04T00:41:08.8845487Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/IRanges_2.26.0.tar.gz' 2021-06-04T00:41:09.0219620Z Content type 'application/x-gzip' length 454754 bytes (444 KB) 2021-06-04T00:41:09.0435368Z ================================================== 2021-06-04T00:41:09.0436173Z downloaded 444 KB 2021-06-04T00:41:09.0436716Z 2021-06-04T00:41:09.0462693Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/S4Vectors_0.30.0.tar.gz' 2021-06-04T00:41:09.0830954Z Content type 'application/x-gzip' length 666133 bytes (650 KB) 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'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bitops_1.0-7.tar.gz' 2021-06-04T00:41:10.1960896Z Content type 'binary/octet-stream' length 35035 bytes (34 KB) 2021-06-04T00:41:10.1963588Z ================================================== 2021-06-04T00:41:10.1964081Z downloaded 34 KB 2021-06-04T00:41:10.1964400Z 2021-06-04T00:41:10.2004850Z trying URL 'https://bioconductor.org/packages/3.13/data/annotation/src/contrib/GenomeInfoDbData_1.2.6.tar.gz' 2021-06-04T00:41:10.3385087Z Content type 'application/x-gzip' length 10973004 bytes (10.5 MB) 2021-06-04T00:41:10.4051338Z ================================================== 2021-06-04T00:41:10.4052268Z downloaded 10.5 MB 2021-06-04T00:41:10.4052754Z 2021-06-04T00:41:10.4075837Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/RCurl_1.98-1.3.tar.gz' 2021-06-04T00:41:11.2130206Z Content type 'binary/octet-stream' length 1126721 bytes (1.1 MB) 2021-06-04T00:41:11.3636911Z ================================================== 2021-06-04T00:41:11.3637548Z downloaded 1.1 MB 2021-06-04T00:41:11.3637873Z 2021-06-04T00:41:11.3684564Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/zlibbioc_1.38.0.tar.gz' 2021-06-04T00:41:11.5018316Z Content type 'application/x-gzip' length 257226 bytes (251 KB) 2021-06-04T00:41:11.5179703Z ================================================== 2021-06-04T00:41:11.5180202Z downloaded 251 KB 2021-06-04T00:41:11.5180485Z 2021-06-04T00:41:11.5205986Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/XVector_0.32.0.tar.gz' 2021-06-04T00:41:11.5577438Z Content type 'application/x-gzip' length 67790 bytes (66 KB) 2021-06-04T00:41:11.5631803Z ================================================== 2021-06-04T00:41:11.5632351Z downloaded 66 KB 2021-06-04T00:41:11.5632672Z 2021-06-04T00:41:11.5658243Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/GenomeInfoDb_1.28.0.tar.gz' 2021-06-04T00:41:11.7072645Z Content type 'application/x-gzip' length 3455463 bytes (3.3 MB) 2021-06-04T00:41:11.7453241Z ================================================== 2021-06-04T00:41:11.7454105Z downloaded 3.3 MB 2021-06-04T00:41:11.7454578Z 2021-06-04T00:41:11.7473124Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/DelayedArray_0.18.0.tar.gz' 2021-06-04T00:41:11.7801209Z Content type 'application/x-gzip' length 678949 bytes (663 KB) 2021-06-04T00:41:11.8050789Z ================================================== 2021-06-04T00:41:11.8051554Z downloaded 663 KB 2021-06-04T00:41:11.8052017Z 2021-06-04T00:41:11.8073813Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/Biobase_2.52.0.tar.gz' 2021-06-04T00:41:11.9464044Z Content type 'application/x-gzip' length 1641182 bytes (1.6 MB) 2021-06-04T00:41:11.9795625Z ================================================== 2021-06-04T00:41:11.9796111Z downloaded 1.6 MB 2021-06-04T00:41:11.9796539Z 2021-06-04T00:41:11.9820455Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/GenomicRanges_1.44.0.tar.gz' 2021-06-04T00:41:12.2364968Z Content type 'application/x-gzip' length 1174233 bytes (1.1 MB) 2021-06-04T00:41:12.3045722Z ================================================== 2021-06-04T00:41:12.3046236Z downloaded 1.1 MB 2021-06-04T00:41:12.3046520Z 2021-06-04T00:41:12.3073548Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/SummarizedExperiment_1.22.0.tar.gz' 2021-06-04T00:41:12.4419547Z Content type 'application/x-gzip' length 1528774 bytes (1.5 MB) 2021-06-04T00:41:12.4753919Z ================================================== 2021-06-04T00:41:12.4755373Z downloaded 1.5 MB 2021-06-04T00:41:12.4756213Z 2021-06-04T00:41:13.0526903Z * installing *binary* package ‘matrixStats’ ... 2021-06-04T00:41:13.0683366Z * DONE (matrixStats) 2021-06-04T00:41:13.3394043Z * installing *source* package ‘BiocGenerics’ ... 2021-06-04T00:41:13.3395608Z ** using staged installation 2021-06-04T00:41:13.3539911Z ** R 2021-06-04T00:41:13.3597985Z ** inst 2021-06-04T00:41:13.3608225Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:41:15.1260076Z ** help 2021-06-04T00:41:15.1261455Z Creating a new generic function for ‘append’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1263094Z Creating a new generic function for ‘as.data.frame’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1264350Z Creating a new generic function for ‘cbind’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1265571Z Creating a new generic function for ‘rbind’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1266754Z Creating a new generic function for ‘do.call’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1267983Z Creating a new generic function for ‘duplicated’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1269322Z Creating a new generic function for ‘anyDuplicated’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1270547Z Creating a new generic function for ‘eval’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1271745Z Creating a new generic function for ‘pmax’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1272916Z Creating a new generic function for ‘pmin’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1274100Z Creating a new generic function for ‘pmax.int’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1275320Z Creating a new generic function for ‘pmin.int’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1276529Z Creating a new generic function for ‘Reduce’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1277709Z Creating a new generic function for ‘Filter’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1278898Z Creating a new generic function for ‘Find’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1280233Z Creating a new generic function for ‘Map’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1281439Z Creating a new generic function for ‘Position’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1282677Z Creating a new generic function for ‘get’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1284759Z Creating a new generic function for ‘mget’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1285806Z Creating a new generic function for ‘grep’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1286853Z Creating a new generic function for ‘grepl’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1287951Z Creating a new generic function for ‘is.unsorted’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1289043Z Creating a new generic function for ‘lapply’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1290092Z Creating a new generic function for ‘sapply’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1291156Z Creating a new generic function for ‘mapply’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1292207Z Creating a new generic function for ‘match’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1293450Z Creating a new generic function for ‘order’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1294504Z Creating a new generic function for ‘paste’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1295646Z Creating a new generic function for ‘rank’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1296731Z Creating a new generic function for ‘rownames’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1297860Z Creating a new generic function for ‘colnames’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1298908Z Creating a new generic function for ‘union’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1299984Z Creating a new generic function for ‘intersect’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1301069Z Creating a new generic function for ‘setdiff’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1302107Z Creating a new generic function for ‘sort’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1303151Z Creating a new generic function for ‘table’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1304226Z Creating a new generic function for ‘tapply’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1305270Z Creating a new generic function for ‘unique’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1306358Z Creating a new generic function for ‘unsplit’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1307388Z Creating a new generic function for ‘var’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1308410Z Creating a new generic function for ‘sd’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1309475Z Creating a new generic function for ‘which.min’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1310557Z Creating a new generic function for ‘which.max’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1311607Z Creating a new generic function for ‘IQR’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1312640Z Creating a new generic function for ‘mad’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1313668Z Creating a new generic function for ‘xtabs’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1314769Z Creating a new generic function for ‘clusterCall’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1315928Z Creating a new generic function for ‘clusterApply’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1317103Z Creating a new generic function for ‘clusterApplyLB’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1318277Z Creating a new generic function for ‘clusterEvalQ’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1319605Z Creating a new generic function for ‘clusterExport’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1320771Z Creating a new generic function for ‘clusterMap’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1321892Z Creating a new generic function for ‘parLapply’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1322992Z Creating a new generic function for ‘parSapply’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1324092Z Creating a new generic function for ‘parApply’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1325207Z Creating a new generic function for ‘parRapply’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1326420Z Creating a new generic function for ‘parCapply’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1327548Z Creating a new generic function for ‘parLapplyLB’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1328704Z Creating a new generic function for ‘parSapplyLB’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1329809Z Creating a new generic function for ‘basename’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.1330899Z Creating a new generic function for ‘dirname’ in package ‘BiocGenerics’ 2021-06-04T00:41:15.3528947Z *** installing help indices 2021-06-04T00:41:15.5177181Z ** building package indices 2021-06-04T00:41:15.8179424Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:41:16.1276922Z ** testing if installed package can be loaded from final location 2021-06-04T00:41:16.4818657Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:41:16.4859746Z * DONE (BiocGenerics) 2021-06-04T00:41:16.6906712Z * installing *binary* package ‘bitops’ ... 2021-06-04T00:41:16.6944702Z * DONE (bitops) 2021-06-04T00:41:17.1792783Z * installing *source* package ‘GenomeInfoDbData’ ... 2021-06-04T00:41:17.1794326Z ** using staged installation 2021-06-04T00:41:17.1877082Z ** data 2021-06-04T00:41:17.1993655Z ** inst 2021-06-04T00:41:17.1999916Z ** help 2021-06-04T00:41:17.2081935Z *** installing help indices 2021-06-04T00:41:17.2215672Z ** building package indices 2021-06-04T00:41:17.3997499Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:41:17.5620731Z ** testing if installed package can be loaded from final location 2021-06-04T00:41:17.7220452Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:41:17.7226009Z * DONE (GenomeInfoDbData) 2021-06-04T00:41:17.9647758Z * installing *source* package ‘zlibbioc’ ... 2021-06-04T00:41:17.9649232Z ** using staged installation 2021-06-04T00:41:18.0858428Z configure: creating ./config.status 2021-06-04T00:41:18.1566282Z config.status: creating src/Makevars 2021-06-04T00:41:18.2002878Z ** libs 2021-06-04T00:41:18.2047488Z mkdir -p "/home/runner/work/_temp/Library/00LOCK-zlibbioc/00new/zlibbioc/include" 2021-06-04T00:41:18.2092950Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c R_init_zlibbioc.c -o R_init_zlibbioc.o 2021-06-04T00:41:18.2236807Z gcc -shared -L/opt/R/4.1.0/lib/R/lib -L/usr/local/lib -o zlibbioc.so R_init_zlibbioc.o -L/opt/R/4.1.0/lib/R/lib -lR 2021-06-04T00:41:18.2360759Z installing to /home/runner/work/_temp/Library/00LOCK-zlibbioc/00new/zlibbioc/libs 2021-06-04T00:41:18.2372037Z ** R 2021-06-04T00:41:18.2391934Z ** inst 2021-06-04T00:41:18.2401014Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:41:18.4369272Z ** help 2021-06-04T00:41:18.4529865Z *** installing help indices 2021-06-04T00:41:18.4726485Z ** building package indices 2021-06-04T00:41:18.6472027Z ** installing vignettes 2021-06-04T00:41:18.6518613Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:41:18.8163376Z ** checking absolute paths in shared objects and dynamic libraries 2021-06-04T00:41:18.8337293Z ** testing if installed package can be loaded from final location 2021-06-04T00:41:18.9923813Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:41:18.9929317Z * DONE (zlibbioc) 2021-06-04T00:41:19.3101817Z * installing *source* package ‘S4Vectors’ ... 2021-06-04T00:41:19.3103309Z ** using staged installation 2021-06-04T00:41:19.3236858Z ** libs 2021-06-04T00:41:19.3290615Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c AEbufs.c -o AEbufs.o 2021-06-04T00:41:19.7629564Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c DataFrame_class.c -o DataFrame_class.o 2021-06-04T00:41:19.8040980Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Hits_class.c -o Hits_class.o 2021-06-04T00:41:19.9864868Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c LLint_class.c -o LLint_class.o 2021-06-04T00:41:20.2076804Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c List_class.c -o List_class.o 2021-06-04T00:41:20.2500357Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c R_init_S4Vectors.c -o R_init_S4Vectors.o 2021-06-04T00:41:20.3105678Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rle_class.c -o Rle_class.o 2021-06-04T00:41:20.6869384Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rle_utils.c -o Rle_utils.o 2021-06-04T00:41:20.9753089Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SEXP_utils.c -o SEXP_utils.o 2021-06-04T00:41:21.0130996Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SimpleList_class.c -o SimpleList_class.o 2021-06-04T00:41:21.0536144Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-06-04T00:41:21.1058411Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c character_utils.c -o character_utils.o 2021-06-04T00:41:21.1917038Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c eval_utils.c -o eval_utils.o 2021-06-04T00:41:21.2382830Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash_utils.c -o hash_utils.o 2021-06-04T00:41:21.2849959Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c integer_utils.c -o integer_utils.o 2021-06-04T00:41:21.5925122Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c logical_utils.c -o logical_utils.o 2021-06-04T00:41:21.6447817Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c map_ranges_to_runs.c -o map_ranges_to_runs.o 2021-06-04T00:41:21.8557582Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raw_utils.c -o raw_utils.o 2021-06-04T00:41:21.9873195Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c safe_arithm.c -o safe_arithm.o 2021-06-04T00:41:22.0631623Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sort_utils.c -o sort_utils.o 2021-06-04T00:41:22.4111769Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c subsetting_utils.c -o subsetting_utils.o 2021-06-04T00:41:22.5119686Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c vector_utils.c -o vector_utils.o 2021-06-04T00:41:22.5812483Z gcc -shared -L/opt/R/4.1.0/lib/R/lib -L/usr/local/lib -o S4Vectors.so AEbufs.o DataFrame_class.o Hits_class.o LLint_class.o List_class.o R_init_S4Vectors.o Rle_class.o Rle_utils.o SEXP_utils.o SimpleList_class.o anyMissing.o character_utils.o eval_utils.o hash_utils.o integer_utils.o logical_utils.o map_ranges_to_runs.o raw_utils.o safe_arithm.o sort_utils.o subsetting_utils.o vector_utils.o -L/opt/R/4.1.0/lib/R/lib -lR 2021-06-04T00:41:22.6123907Z installing to /home/runner/work/_temp/Library/00LOCK-S4Vectors/00new/S4Vectors/libs 2021-06-04T00:41:22.6144306Z ** R 2021-06-04T00:41:22.6589343Z ** inst 2021-06-04T00:41:22.6617768Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:41:34.7899881Z in method for ‘normalizeSingleBracketReplacementValue’ with signature ‘"List"’: no definition for class “List” 2021-06-04T00:41:34.7906505Z ** help 2021-06-04T00:41:34.7907539Z Creating a new generic function for ‘unname’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7908617Z Creating a new generic function for ‘expand.grid’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7909701Z Creating a new generic function for ‘findMatches’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7924952Z Creating a generic function for ‘setequal’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7926360Z in method for ‘coerce’ with signature ‘"Hits","DFrame"’: no definition for class “DFrame” 2021-06-04T00:41:34.7927540Z Creating a generic function for ‘as.factor’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7928738Z Creating a generic function for ‘tabulate’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7929870Z Creating a generic function for ‘cov’ from package ‘stats’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7930988Z Creating a generic function for ‘cor’ from package ‘stats’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7932157Z Creating a generic function for ‘smoothEnds’ from package ‘stats’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7933310Z Creating a generic function for ‘runmed’ from package ‘stats’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7934446Z Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7935597Z Creating a generic function for ‘substr’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7936753Z Creating a generic function for ‘substring’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7937907Z Creating a generic function for ‘chartr’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7939146Z Creating a generic function for ‘tolower’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7940324Z Creating a generic function for ‘toupper’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7941455Z Creating a generic function for ‘sub’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7942544Z Creating a generic function for ‘gsub’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7943678Z Creating a generic function for ‘nlevels’ from package ‘base’ in package ‘S4Vectors’ 2021-06-04T00:41:34.7944915Z in method for ‘coerce’ with signature ‘"data.table","DFrame"’: no definition for class “data.table” 2021-06-04T00:41:34.7946167Z Creating a generic function for ‘complete.cases’ from package ‘stats’ in package ‘S4Vectors’ 2021-06-04T00:41:35.0456220Z *** installing help indices 2021-06-04T00:41:35.2110002Z ** building package indices 2021-06-04T00:41:35.5120251Z ** installing vignettes 2021-06-04T00:41:35.5183666Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:41:36.3662641Z ** checking absolute paths in shared objects and dynamic libraries 2021-06-04T00:41:36.3841600Z ** testing if installed package can be loaded from final location 2021-06-04T00:41:37.4467575Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:41:37.4615579Z * DONE (S4Vectors) 2021-06-04T00:41:37.7028239Z * installing *source* package ‘MatrixGenerics’ ... 2021-06-04T00:41:37.7029766Z ** using staged installation 2021-06-04T00:41:37.7167152Z ** R 2021-06-04T00:41:37.7274821Z ** inst 2021-06-04T00:41:37.7281419Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:41:39.0640211Z ** help 2021-06-04T00:41:39.1950730Z *** installing help indices 2021-06-04T00:41:39.2767906Z ** building package indices 2021-06-04T00:41:39.5280021Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:41:39.7638038Z ** testing if installed package can be loaded from final location 2021-06-04T00:41:40.0144403Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:41:40.0161310Z * DONE (MatrixGenerics) 2021-06-04T00:41:40.3249682Z * installing *binary* package ‘RCurl’ ... 2021-06-04T00:41:40.3323863Z * DONE (RCurl) 2021-06-04T00:41:40.7099928Z * installing *source* package ‘Biobase’ ... 2021-06-04T00:41:40.7101295Z ** using staged installation 2021-06-04T00:41:40.7222164Z ** libs 2021-06-04T00:41:40.7268620Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o 2021-06-04T00:41:40.7652493Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-06-04T00:41:40.8177736Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envir.c -o envir.o 2021-06-04T00:41:40.8901065Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matchpt.c -o matchpt.o 2021-06-04T00:41:40.9478369Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMedians.c -o rowMedians.o 2021-06-04T00:41:41.0822906Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sublist_extract.c -o sublist_extract.o 2021-06-04T00:41:41.1688634Z gcc -shared -L/opt/R/4.1.0/lib/R/lib -L/usr/local/lib -o Biobase.so Rinit.o anyMissing.o envir.o matchpt.o rowMedians.o sublist_extract.o -L/opt/R/4.1.0/lib/R/lib -lR 2021-06-04T00:41:41.1909521Z installing to /home/runner/work/_temp/Library/00LOCK-Biobase/00new/Biobase/libs 2021-06-04T00:41:41.1924559Z ** R 2021-06-04T00:41:41.2047190Z ** data 2021-06-04T00:41:41.2058527Z ** inst 2021-06-04T00:41:41.2122175Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:41:45.5505853Z ** help 2021-06-04T00:41:45.7775630Z *** installing help indices 2021-06-04T00:41:45.9480665Z ** building package indices 2021-06-04T00:41:46.6615781Z ** installing vignettes 2021-06-04T00:41:46.6679004Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:41:47.1510147Z ** checking absolute paths in shared objects and dynamic libraries 2021-06-04T00:41:47.1685335Z ** testing if installed package can be loaded from final location 2021-06-04T00:41:47.7064383Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:41:47.7125565Z * DONE (Biobase) 2021-06-04T00:41:48.0334335Z * installing *source* package ‘IRanges’ ... 2021-06-04T00:41:48.0335813Z ** using staged installation 2021-06-04T00:41:48.0503000Z ** libs 2021-06-04T00:41:48.0558278Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c CompressedAtomicList_utils.c -o CompressedAtomicList_utils.o 2021-06-04T00:41:48.3779837Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c CompressedIRangesList_class.c -o CompressedIRangesList_class.o 2021-06-04T00:41:48.4731634Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c CompressedList_class.c -o CompressedList_class.o 2021-06-04T00:41:48.5280308Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c Grouping_class.c -o Grouping_class.o 2021-06-04T00:41:48.6066085Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c IPosRanges_comparison.c -o IPosRanges_comparison.o 2021-06-04T00:41:48.6692251Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c IRanges_class.c -o IRanges_class.o 2021-06-04T00:41:48.8011821Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c IRanges_constructor.c -o IRanges_constructor.o 2021-06-04T00:41:48.9240828Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c NCList.c -o NCList.o 2021-06-04T00:41:49.2080791Z NCList.c: In function ‘C_print_NCListAsINTSXP’: 2021-06-04T00:41:49.2082531Z NCList.c:674:23: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=] 2021-06-04T00:41:49.2083750Z 674 | sprintf(format, "%c0%d%c", '%', max_digits, 'd'); 2021-06-04T00:41:49.2084324Z | ^~ 2021-06-04T00:41:49.2085305Z NCList.c:674:19: note: directive argument in the range [-2147483647, 2147483647] 2021-06-04T00:41:49.2086294Z 674 | sprintf(format, "%c0%d%c", '%', max_digits, 'd'); 2021-06-04T00:41:49.2087081Z | ^~~~~~~~~ 2021-06-04T00:41:49.2087708Z In file included from /usr/include/stdio.h:867, 2021-06-04T00:41:49.2088507Z from /opt/R/4.1.0/lib/R/include/Rinternals.h:39, 2021-06-04T00:41:49.2089294Z from /opt/R/4.1.0/lib/R/include/Rdefines.h:40, 2021-06-04T00:41:49.2090265Z from /home/runner/work/_temp/Library/S4Vectors/include/S4Vectors_defines.h:18, 2021-06-04T00:41:49.2091172Z from ../inst/include/IRanges_defines.h:18, 2021-06-04T00:41:49.2091822Z from IRanges.h:1, 2021-06-04T00:41:49.2092367Z from NCList.c:5: 2021-06-04T00:41:49.2093798Z /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 5 and 15 bytes into a destination of size 10 2021-06-04T00:41:49.2095108Z 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, 2021-06-04T00:41:49.2095821Z | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-06-04T00:41:49.2096403Z 37 | __bos (__s), __fmt, __va_arg_pack ()); 2021-06-04T00:41:49.2096964Z | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-06-04T00:41:49.2825450Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c R_init_IRanges.c -o R_init_IRanges.o 2021-06-04T00:41:49.3278924Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c Ranges_class.c -o Ranges_class.o 2021-06-04T00:41:49.3798690Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c RleViews_utils.c -o RleViews_utils.o 2021-06-04T00:41:49.7297675Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o 2021-06-04T00:41:50.0827257Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c SimpleIRangesList_class.c -o SimpleIRangesList_class.o 2021-06-04T00:41:50.1492475Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c coverage_methods.c -o coverage_methods.o 2021-06-04T00:41:50.4179001Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c extractListFragments.c -o extractListFragments.o 2021-06-04T00:41:50.4779284Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c inter_range_methods.c -o inter_range_methods.o 2021-06-04T00:41:50.6504212Z gcc -shared -L/opt/R/4.1.0/lib/R/lib -L/usr/local/lib -o IRanges.so CompressedAtomicList_utils.o CompressedIRangesList_class.o CompressedList_class.o Grouping_class.o IPosRanges_comparison.o IRanges_class.o IRanges_constructor.o NCList.o R_init_IRanges.o Ranges_class.o RleViews_utils.o S4Vectors_stubs.o SimpleIRangesList_class.o coverage_methods.o extractListFragments.o inter_range_methods.o -L/opt/R/4.1.0/lib/R/lib -lR 2021-06-04T00:41:50.6801137Z installing to /home/runner/work/_temp/Library/00LOCK-IRanges/00new/IRanges/libs 2021-06-04T00:41:50.6814260Z ** R 2021-06-04T00:41:50.7260426Z ** inst 2021-06-04T00:41:50.7288601Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:42:31.3841321Z Creating a generic function for ‘drop’ from package ‘base’ in package ‘IRanges’ 2021-06-04T00:42:31.3842998Z ** help 2021-06-04T00:42:31.3843966Z Creating a generic function for ‘runmed’ from package ‘stats’ in package ‘IRanges’ 2021-06-04T00:42:31.3845380Z Creating a generic function for ‘chartr’ from package ‘base’ in package ‘IRanges’ 2021-06-04T00:42:31.3846644Z Creating a generic function for ‘toupper’ from package ‘base’ in package ‘IRanges’ 2021-06-04T00:42:31.3848141Z Creating a generic function for ‘tolower’ from package ‘base’ in package ‘IRanges’ 2021-06-04T00:42:31.3849440Z Creating a generic function for ‘sub’ from package ‘base’ in package ‘IRanges’ 2021-06-04T00:42:31.3850704Z Creating a generic function for ‘gsub’ from package ‘base’ in package ‘IRanges’ 2021-06-04T00:42:31.3851977Z Creating a generic function for ‘startsWith’ from package ‘base’ in package ‘IRanges’ 2021-06-04T00:42:31.3853280Z Creating a generic function for ‘endsWith’ from package ‘base’ in package ‘IRanges’ 2021-06-04T00:42:31.3854590Z Creating a generic function for ‘smoothEnds’ from package ‘stats’ in package ‘IRanges’ 2021-06-04T00:42:31.6962238Z *** installing help indices 2021-06-04T00:42:31.8806867Z ** building package indices 2021-06-04T00:42:32.1960237Z ** installing vignettes 2021-06-04T00:42:32.2002119Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:42:33.6300092Z ** checking absolute paths in shared objects and dynamic libraries 2021-06-04T00:42:33.6476738Z ** testing if installed package can be loaded from final location 2021-06-04T00:42:35.4126975Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:42:35.4350805Z * DONE (IRanges) 2021-06-04T00:42:35.6780538Z * installing *source* package ‘XVector’ ... 2021-06-04T00:42:35.6782061Z ** using staged installation 2021-06-04T00:42:35.6915395Z ** libs 2021-06-04T00:42:35.6977630Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c IRanges_stubs.c -o IRanges_stubs.o 2021-06-04T00:42:35.8238403Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c Ocopy_byteblocks.c -o Ocopy_byteblocks.o 2021-06-04T00:42:35.9842277Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c RDS_random_access.c -o RDS_random_access.o 2021-06-04T00:42:36.1968211Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c R_init_XVector.c -o R_init_XVector.o 2021-06-04T00:42:36.2467545Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o 2021-06-04T00:42:36.9758834Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c SharedDouble_class.c -o SharedDouble_class.o 2021-06-04T00:42:36.9762695Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c SharedInteger_class.c -o SharedInteger_class.o 2021-06-04T00:42:36.9765829Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c SharedRaw_class.c -o SharedRaw_class.o 2021-06-04T00:42:36.9768784Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c SharedVector_class.c -o SharedVector_class.o 2021-06-04T00:42:37.0044563Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c XDouble_class.c -o XDouble_class.o 2021-06-04T00:42:37.0480251Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c XInteger_class.c -o XInteger_class.o 2021-06-04T00:42:37.0920967Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c XRawList_comparison.c -o XRawList_comparison.o 2021-06-04T00:42:37.2407984Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c XRaw_class.c -o XRaw_class.o 2021-06-04T00:42:37.2989096Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c XVectorList_class.c -o XVectorList_class.o 2021-06-04T00:42:37.4522593Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c XVector_class.c -o XVector_class.o 2021-06-04T00:42:37.5040247Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c io_utils.c -o io_utils.o 2021-06-04T00:42:37.6343221Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c slice_methods.c -o slice_methods.o 2021-06-04T00:42:37.7121383Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c vector_copy.c -o vector_copy.o 2021-06-04T00:42:37.8080841Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c view_summarization_methods.c -o view_summarization_methods.o 2021-06-04T00:42:37.9784326Z gcc -shared -L/opt/R/4.1.0/lib/R/lib -L/usr/local/lib -o XVector.so IRanges_stubs.o Ocopy_byteblocks.o RDS_random_access.o R_init_XVector.o S4Vectors_stubs.o SharedDouble_class.o SharedInteger_class.o SharedRaw_class.o SharedVector_class.o XDouble_class.o XInteger_class.o XRawList_comparison.o XRaw_class.o XVectorList_class.o XVector_class.o io_utils.o slice_methods.o vector_copy.o view_summarization_methods.o -lz -L/opt/R/4.1.0/lib/R/lib -lR 2021-06-04T00:42:38.0086775Z installing to /home/runner/work/_temp/Library/00LOCK-XVector/00new/XVector/libs 2021-06-04T00:42:38.0108218Z ** R 2021-06-04T00:42:38.0253370Z ** inst 2021-06-04T00:42:38.0264428Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:42:43.0624208Z ** help 2021-06-04T00:42:43.1162260Z *** installing help indices 2021-06-04T00:42:43.1547076Z ** building package indices 2021-06-04T00:42:43.3647803Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:42:44.9850019Z ** checking absolute paths in shared objects and dynamic libraries 2021-06-04T00:42:45.0025992Z ** testing if installed package can be loaded from final location 2021-06-04T00:42:46.7471923Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:42:46.7547971Z * DONE (XVector) 2021-06-04T00:42:47.1889148Z * installing *source* package ‘GenomeInfoDb’ ... 2021-06-04T00:42:47.1890683Z ** using staged installation 2021-06-04T00:42:47.2042185Z ** R 2021-06-04T00:42:47.2270426Z ** inst 2021-06-04T00:42:47.2379079Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:42:52.4024175Z ** help 2021-06-04T00:42:52.4872646Z *** installing help indices 2021-06-04T00:42:52.5370847Z ** building package indices 2021-06-04T00:42:52.7523734Z ** installing vignettes 2021-06-04T00:42:52.7584969Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:42:54.4301324Z ** testing if installed package can be loaded from final location 2021-06-04T00:42:56.1686350Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:42:56.1761561Z * DONE (GenomeInfoDb) 2021-06-04T00:42:56.4924759Z * installing *source* package ‘DelayedArray’ ... 2021-06-04T00:42:56.4926409Z ** using staged installation 2021-06-04T00:42:56.5100484Z ** libs 2021-06-04T00:42:56.5153141Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c R_init_DelayedArray.c -o R_init_DelayedArray.o 2021-06-04T00:42:56.5544964Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o 2021-06-04T00:42:56.9086014Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c abind.c -o abind.o 2021-06-04T00:42:56.9706536Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c array_selection.c -o array_selection.o 2021-06-04T00:42:57.0983802Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c compress_atomic_vector.c -o compress_atomic_vector.o 2021-06-04T00:42:57.1483871Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I/usr/local/include -fpic -g -O2 -c sparseMatrix_utils.c -o sparseMatrix_utils.o 2021-06-04T00:42:57.2870777Z gcc -shared -L/opt/R/4.1.0/lib/R/lib -L/usr/local/lib -o DelayedArray.so R_init_DelayedArray.o S4Vectors_stubs.o abind.o array_selection.o compress_atomic_vector.o sparseMatrix_utils.o -L/opt/R/4.1.0/lib/R/lib -lR 2021-06-04T00:42:57.3121682Z installing to /home/runner/work/_temp/Library/00LOCK-DelayedArray/00new/DelayedArray/libs 2021-06-04T00:42:57.3122927Z ** R 2021-06-04T00:42:57.3503128Z ** inst 2021-06-04T00:42:57.3531249Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:43:12.2788875Z Creating a new generic function for ‘rowsum’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2790498Z Creating a new generic function for ‘aperm’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2791778Z Creating a new generic function for ‘apply’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2793065Z Creating a new generic function for ‘sweep’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2794327Z Creating a new generic function for ‘scale’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2795657Z Creating a generic function for ‘dnorm’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2797062Z Creating a generic function for ‘pnorm’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2798498Z Creating a generic function for ‘qnorm’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2800367Z Creating a generic function for ‘dbinom’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2801634Z Creating a generic function for ‘pbinom’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2802845Z Creating a generic function for ‘qbinom’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2804034Z Creating a generic function for ‘dpois’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2805237Z Creating a generic function for ‘ppois’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2806428Z Creating a generic function for ‘qpois’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2807603Z Creating a generic function for ‘dlogis’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2808808Z Creating a generic function for ‘plogis’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2810211Z Creating a generic function for ‘qlogis’ from package ‘stats’ in package ‘DelayedArray’ 2021-06-04T00:43:12.2813758Z ** help 2021-06-04T00:43:12.4738131Z *** installing help indices 2021-06-04T00:43:12.6093653Z ** building package indices 2021-06-04T00:43:12.8819271Z ** installing vignettes 2021-06-04T00:43:12.8896735Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:43:15.8341907Z ** checking absolute paths in shared objects and dynamic libraries 2021-06-04T00:43:15.8515504Z ** testing if installed package can be loaded from final location 2021-06-04T00:43:19.1777609Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:43:19.1992787Z * DONE (DelayedArray) 2021-06-04T00:43:19.5275179Z * installing *source* package ‘GenomicRanges’ ... 2021-06-04T00:43:19.5276605Z ** using staged installation 2021-06-04T00:43:19.5478644Z ** libs 2021-06-04T00:43:19.5533238Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c IRanges_stubs.c -o IRanges_stubs.o 2021-06-04T00:43:19.6787554Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c R_init_GenomicRanges.c -o R_init_GenomicRanges.o 2021-06-04T00:43:19.7149384Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o 2021-06-04T00:43:20.0658700Z gcc -I"/opt/R/4.1.0/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/S4Vectors/include' -I'/home/runner/work/_temp/Library/IRanges/include' -I/usr/local/include -fpic -g -O2 -c transcript_utils.c -o transcript_utils.o 2021-06-04T00:43:20.1625286Z gcc -shared -L/opt/R/4.1.0/lib/R/lib -L/usr/local/lib -o GenomicRanges.so IRanges_stubs.o R_init_GenomicRanges.o S4Vectors_stubs.o transcript_utils.o -L/opt/R/4.1.0/lib/R/lib -lR 2021-06-04T00:43:20.1881695Z installing to /home/runner/work/_temp/Library/00LOCK-GenomicRanges/00new/GenomicRanges/libs 2021-06-04T00:43:20.1882902Z ** R 2021-06-04T00:43:20.2115104Z ** inst 2021-06-04T00:43:20.2154366Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:43:31.1344029Z ** help 2021-06-04T00:43:31.9902745Z *** installing help indices 2021-06-04T00:43:31.9910981Z ** building package indices 2021-06-04T00:43:31.9911765Z ** installing vignettes 2021-06-04T00:43:31.9912713Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:43:33.7508787Z ** checking absolute paths in shared objects and dynamic libraries 2021-06-04T00:43:33.7685103Z ** testing if installed package can be loaded from final location 2021-06-04T00:43:36.0720958Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:43:36.0806075Z * DONE (GenomicRanges) 2021-06-04T00:43:36.4339706Z * installing *source* package ‘SummarizedExperiment’ ... 2021-06-04T00:43:36.4341331Z ** using staged installation 2021-06-04T00:43:36.4535026Z ** R 2021-06-04T00:43:36.4652986Z ** inst 2021-06-04T00:43:36.4710432Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:43:46.8611988Z ** help 2021-06-04T00:43:46.9390218Z *** installing help indices 2021-06-04T00:43:46.9883646Z ** building package indices 2021-06-04T00:43:47.2041191Z ** installing vignettes 2021-06-04T00:43:47.2107954Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:43:51.5575390Z ** testing if installed package can be loaded from final location 2021-06-04T00:43:56.1601691Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:43:56.1768213Z * DONE (SummarizedExperiment) 2021-06-04T00:43:56.1920870Z 2021-06-04T00:43:56.1922119Z The downloaded source packages are in 2021-06-04T00:43:56.1923816Z ‘/tmp/RtmpSUJ7JR/downloaded_packages’ 2021-06-04T00:43:56.3594244Z 2021-06-04T00:43:56.3601615Z checking for file ‘/tmp/RtmpSUJ7JR/remotes74521c9a5675/neuroconductor-neuroCombatData-a68005c/DESCRIPTION’ ... 2021-06-04T00:43:56.3638333Z 2021-06-04T00:43:56.3640441Z ✔ checking for file ‘/tmp/RtmpSUJ7JR/remotes74521c9a5675/neuroconductor-neuroCombatData-a68005c/DESCRIPTION’ 2021-06-04T00:43:56.3711140Z 2021-06-04T00:43:56.3721128Z 2021-06-04T00:43:56.3734093Z ─ preparing ‘neuroCombatData’: 2021-06-04T00:43:56.3734755Z 2021-06-04T00:43:56.3735181Z 2021-06-04T00:43:56.3798089Z checking DESCRIPTION meta-information ... 2021-06-04T00:43:56.3820138Z 2021-06-04T00:43:56.3823415Z ✔ checking DESCRIPTION meta-information 2021-06-04T00:43:56.4006362Z 2021-06-04T00:43:56.4026974Z 2021-06-04T00:43:56.4029109Z ─ checking for LF line-endings in source and make files and shell scripts 2021-06-04T00:43:56.4036486Z 2021-06-04T00:43:56.4057903Z 2021-06-04T00:43:56.4059862Z ─ checking for empty or unneeded directories 2021-06-04T00:43:56.4067032Z 2021-06-04T00:43:56.4089047Z 2021-06-04T00:43:56.4090969Z ─ building ‘neuroCombatData_0.99.0.tar.gz’ 2021-06-04T00:43:56.4568737Z 2021-06-04T00:43:56.4571373Z 2021-06-04T00:43:56.4572992Z 2021-06-04T00:43:56.4937875Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:43:56.4939202Z (as ‘lib’ is unspecified) 2021-06-04T00:43:56.7126805Z * installing *source* package ‘neuroCombatData’ ... 2021-06-04T00:43:56.7128315Z ** using staged installation 2021-06-04T00:43:56.7264801Z ** R 2021-06-04T00:43:56.7285401Z ** data 2021-06-04T00:43:56.7297397Z *** moving datasets to lazyload DB 2021-06-04T00:43:56.7846569Z ** inst 2021-06-04T00:43:56.7854692Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:44:01.2210970Z ** help 2021-06-04T00:44:01.2297431Z *** installing help indices 2021-06-04T00:44:01.2442526Z ** building package indices 2021-06-04T00:44:01.4250052Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:44:05.7803119Z ** testing if installed package can be loaded from final location 2021-06-04T00:44:10.1191982Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:44:10.1198053Z * DONE (neuroCombatData) 2021-06-04T00:44:10.1270879Z Installing 14 packages: base64enc, tinytex, htmltools, rmarkdown, formatR, futile.options, lambda.r, BiocManager, bookdown, BH, snow, futile.logger, BiocStyle, matrixStats 2021-06-04T00:44:10.1277091Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-06-04T00:44:10.1278011Z (as ‘lib’ is unspecified) 2021-06-04T00:44:24.3863338Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-06-04T00:44:24.9649639Z Content type 'binary/octet-stream' length 38946 bytes (38 KB) 2021-06-04T00:44:24.9670945Z ================================================== 2021-06-04T00:44:24.9671487Z downloaded 38 KB 2021-06-04T00:44:24.9671840Z 2021-06-04T00:44:24.9716441Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.32.tar.gz' 2021-06-04T00:44:26.0319429Z Content type 'binary/octet-stream' length 120275 bytes (117 KB) 2021-06-04T00:44:26.0531972Z ================================================== 2021-06-04T00:44:26.0533607Z downloaded 117 KB 2021-06-04T00:44:26.0534452Z 2021-06-04T00:44:26.0579604Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-06-04T00:44:26.5634013Z Content type 'binary/octet-stream' length 236488 bytes (230 KB) 2021-06-04T00:44:26.5916791Z ================================================== 2021-06-04T00:44:26.5917746Z downloaded 230 KB 2021-06-04T00:44:26.5918293Z 2021-06-04T00:44:26.5958203Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-06-04T00:44:29.5130800Z Content type 'binary/octet-stream' length 3650634 bytes (3.5 MB) 2021-06-04T00:44:29.6316170Z ================================================== 2021-06-04T00:44:29.6316895Z downloaded 3.5 MB 2021-06-04T00:44:29.6317301Z 2021-06-04T00:44:29.6359606Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/formatR_1.11.tar.gz' 2021-06-04T00:44:30.2902780Z Content type 'binary/octet-stream' length 145046 bytes (141 KB) 2021-06-04T00:44:30.3101821Z ================================================== 2021-06-04T00:44:30.3103432Z downloaded 141 KB 2021-06-04T00:44:30.3103763Z 2021-06-04T00:44:30.3147935Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/futile.options_1.0.1.tar.gz' 2021-06-04T00:44:30.8322601Z Content type 'binary/octet-stream' length 17999 bytes (17 KB) 2021-06-04T00:44:30.8331257Z ================================================== 2021-06-04T00:44:30.8331898Z downloaded 17 KB 2021-06-04T00:44:30.8332343Z 2021-06-04T00:44:30.8368618Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lambda.r_1.2.4.tar.gz' 2021-06-04T00:44:31.3855283Z Content type 'binary/octet-stream' length 109661 bytes (107 KB) 2021-06-04T00:44:31.4054402Z ================================================== 2021-06-04T00:44:31.4056289Z downloaded 107 KB 2021-06-04T00:44:31.4057009Z 2021-06-04T00:44:31.4182569Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/BiocManager_1.30.15.tar.gz' 2021-06-04T00:44:33.7765979Z Content type 'binary/octet-stream' length 328892 bytes (321 KB) 2021-06-04T00:44:33.8113359Z ================================================== 2021-06-04T00:44:33.8114230Z downloaded 321 KB 2021-06-04T00:44:33.8114786Z 2021-06-04T00:44:33.8156925Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/bookdown_0.22.tar.gz' 2021-06-04T00:44:34.5416258Z Content type 'binary/octet-stream' length 1083520 bytes (1.0 MB) 2021-06-04T00:44:34.6197994Z ================================================== 2021-06-04T00:44:34.6200625Z downloaded 1.0 MB 2021-06-04T00:44:34.6201088Z 2021-06-04T00:44:34.6255453Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/BH_1.75.0-0.tar.gz' 2021-06-04T00:44:35.1169761Z Content type 'binary/octet-stream' length 11881010 bytes (11.3 MB) 2021-06-04T00:44:35.3921504Z ================================================== 2021-06-04T00:44:35.3922030Z downloaded 11.3 MB 2021-06-04T00:44:35.3922361Z 2021-06-04T00:44:35.4469799Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/snow_0.4-3.tar.gz' 2021-06-04T00:44:35.9951856Z Content type 'binary/octet-stream' length 105861 bytes (103 KB) 2021-06-04T00:44:36.0156136Z ================================================== 2021-06-04T00:44:36.0157159Z downloaded 103 KB 2021-06-04T00:44:36.0157788Z 2021-06-04T00:44:36.0194356Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/futile.logger_1.4.3.tar.gz' 2021-06-04T00:44:36.5712868Z Content type 'binary/octet-stream' length 99347 bytes (97 KB) 2021-06-04T00:44:36.5875354Z ================================================== 2021-06-04T00:44:36.5875866Z downloaded 97 KB 2021-06-04T00:44:36.5876132Z 2021-06-04T00:44:36.5918271Z trying URL 'https://bioconductor.org/packages/3.13/bioc/src/contrib/BiocStyle_2.20.0.tar.gz' 2021-06-04T00:44:36.7280204Z Content type 'application/x-gzip' length 755356 bytes (737 KB) 2021-06-04T00:44:36.7522624Z ================================================== 2021-06-04T00:44:36.7523165Z downloaded 737 KB 2021-06-04T00:44:36.7523453Z 2021-06-04T00:44:36.7556629Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.59.0.tar.gz' 2021-06-04T00:44:36.9478280Z Content type 'binary/octet-stream' length 2549027 bytes (2.4 MB) 2021-06-04T00:44:37.1198225Z ================================================== 2021-06-04T00:44:37.1198753Z downloaded 2.4 MB 2021-06-04T00:44:37.1199019Z 2021-06-04T00:44:37.3165330Z * installing *binary* package ‘base64enc’ ... 2021-06-04T00:44:37.3205040Z * DONE (base64enc) 2021-06-04T00:44:37.5201950Z * installing *binary* package ‘tinytex’ ... 2021-06-04T00:44:37.5241921Z * DONE (tinytex) 2021-06-04T00:44:37.7388236Z * installing *binary* package ‘formatR’ ... 2021-06-04T00:44:37.7454146Z * DONE (formatR) 2021-06-04T00:44:37.9383541Z * installing *binary* package ‘futile.options’ ... 2021-06-04T00:44:37.9442258Z * DONE (futile.options) 2021-06-04T00:44:38.1720054Z * installing *binary* package ‘BiocManager’ ... 2021-06-04T00:44:38.1764222Z * DONE (BiocManager) 2021-06-04T00:44:48.8341273Z * installing *binary* package ‘BH’ ... 2021-06-04T00:44:49.2905122Z * DONE (BH) 2021-06-04T00:44:49.8741489Z * installing *binary* package ‘snow’ ... 2021-06-04T00:44:49.8804008Z * DONE (snow) 2021-06-04T00:44:50.4668366Z * installing *binary* package ‘matrixStats’ ... 2021-06-04T00:44:50.4841329Z * DONE (matrixStats) 2021-06-04T00:44:50.6972592Z * installing *binary* package ‘htmltools’ ... 2021-06-04T00:44:50.7011898Z * DONE (htmltools) 2021-06-04T00:44:50.8973025Z * installing *binary* package ‘lambda.r’ ... 2021-06-04T00:44:50.9032005Z * DONE (lambda.r) 2021-06-04T00:44:51.5236959Z * installing *binary* package ‘rmarkdown’ ... 2021-06-04T00:44:51.5430972Z * DONE (rmarkdown) 2021-06-04T00:44:51.7465122Z * installing *binary* package ‘futile.logger’ ... 2021-06-04T00:44:51.7525707Z * DONE (futile.logger) 2021-06-04T00:44:52.0528417Z * installing *binary* package ‘bookdown’ ... 2021-06-04T00:44:52.0608549Z * DONE (bookdown) 2021-06-04T00:44:52.3483514Z * installing *source* package ‘BiocStyle’ ... 2021-06-04T00:44:52.3484980Z ** using staged installation 2021-06-04T00:44:52.3623434Z ** R 2021-06-04T00:44:52.3696665Z ** inst 2021-06-04T00:44:52.3742815Z ** byte-compile and prepare package for lazy loading 2021-06-04T00:44:53.0361435Z ** help 2021-06-04T00:44:53.0671316Z *** installing help indices 2021-06-04T00:44:53.0918311Z ** building package indices 2021-06-04T00:44:53.2784076Z ** installing vignettes 2021-06-04T00:44:53.2840283Z ** testing if installed package can be loaded from temporary location 2021-06-04T00:44:53.5192280Z ** testing if installed package can be loaded from final location 2021-06-04T00:44:53.7586708Z ** testing if installed package keeps a record of temporary installation path 2021-06-04T00:44:53.7602874Z * DONE (BiocStyle) 2021-06-04T00:44:53.7680506Z 2021-06-04T00:44:53.7682372Z The downloaded source packages are in 2021-06-04T00:44:53.7683865Z ‘/tmp/RtmpSUJ7JR/downloaded_packages’ 2021-06-04T00:44:53.9560129Z Skipping install of 'BiocParallel' from a bioc_git2r remote, the SHA1 (51150a51) has not changed since last install. 2021-06-04T00:44:53.9561251Z Use `force = TRUE` to force installation 2021-06-04T00:44:54.0491850Z Skipping install of 'neuroCombatData' from a github remote, the SHA1 (a68005ce) has not changed since last install. 2021-06-04T00:44:54.0492892Z Use `force = TRUE` to force installation 2021-06-04T00:45:07.7588854Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.3.3) has not changed since last install. 2021-06-04T00:45:07.7590253Z Use `force = TRUE` to force installation 2021-06-04T00:45:07.7600870Z Skipping install of 'markdown' from a cran remote, the SHA1 (1.1) has not changed since last install. 2021-06-04T00:45:07.7602176Z Use `force = TRUE` to force installation 2021-06-04T00:45:07.7758645Z 2021-06-04T00:45:07.7792410Z ##[group]Run options(width = 100) 2021-06-04T00:45:07.7792917Z options(width = 100) 2021-06-04T00:45:07.7793479Z pkgs <- installed.packages()[, "Package"] 2021-06-04T00:45:07.7794164Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-06-04T00:45:07.7801952Z shell: /usr/local/bin/Rscript {0} 2021-06-04T00:45:07.7802352Z env: 2021-06-04T00:45:07.7802798Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:45:07.7803246Z TIC_DEPLOY_KEY: 2021-06-04T00:45:07.7804027Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:45:07.7805760Z GITHUB_PAT: *** 2021-06-04T00:45:07.7806743Z COVERALLS_TOKEN: *** 2021-06-04T00:45:07.7807220Z continue-on-error: false 2021-06-04T00:45:07.7807693Z VDIFFR_RUN_TESTS: 2021-06-04T00:45:07.7808158Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:45:07.7808595Z TZ: UTC 2021-06-04T00:45:07.7808979Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:45:07.7809415Z NOT_CRAN: true 2021-06-04T00:45:07.7809781Z ##[endgroup] 2021-06-04T00:45:08.2198984Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-06-04T00:45:08.2199866Z setting value 2021-06-04T00:45:08.2200666Z version R version 4.1.0 (2021-05-18) 2021-06-04T00:45:08.2201248Z os Ubuntu 20.04.2 LTS 2021-06-04T00:45:08.2201986Z system x86_64, linux-gnu 2021-06-04T00:45:08.2202521Z ui X11 2021-06-04T00:45:08.2203040Z language (EN) 2021-06-04T00:45:08.2203762Z collate C.UTF-8 2021-06-04T00:45:08.2204508Z ctype C.UTF-8 2021-06-04T00:45:08.2205037Z tz UTC 2021-06-04T00:45:08.2205682Z date 2021-06-04 2021-06-04T00:45:08.2205987Z 2021-06-04T00:45:08.2206943Z ─ Packages ─────────────────────────────────────────────────────────────────────────────────────── 2021-06-04T00:45:08.2207781Z package * version date lib source 2021-06-04T00:45:08.2210160Z aghast 0.2.1 2021-06-04 [1] Github (muschellij2/aghast@0c3b853) 2021-06-04T00:45:08.2211243Z askpass 1.1 2019-01-13 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2212212Z base * 4.1.0 2021-05-18 [2] local 2021-06-04T00:45:08.2213185Z base64enc 0.1-3 2015-07-28 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2214163Z BH 1.75.0-0 2021-01-11 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2215156Z Biobase 2.52.0 2021-05-19 [1] Bioconductor 2021-06-04T00:45:08.2216253Z BiocGenerics 0.38.0 2021-05-19 [1] Bioconductor 2021-06-04T00:45:08.2217344Z BiocManager 1.30.15 2021-05-11 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2218384Z BiocParallel 1.26.0 2021-06-04 [1] bioc_git2r (@51150a5) 2021-06-04T00:45:08.2219463Z BiocStyle 2.20.0 2021-05-19 [1] Bioconductor 2021-06-04T00:45:08.2220485Z bitops 1.0-7 2021-04-24 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2221443Z bookdown 0.22 2021-04-22 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2222402Z boot 1.3-28 2021-05-03 [2] CRAN (R 4.1.0) 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2021-06-04T00:45:08.2352325Z waldo 0.2.5 2021-03-08 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2353162Z whisker 0.4 2019-08-28 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2353991Z withr 2.4.2 2021-04-18 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2354797Z xfun 0.23 2021-05-15 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2355612Z xml2 1.3.2 2020-04-23 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2356435Z xopen 1.0.0 2018-09-17 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2357293Z XVector 0.32.0 2021-05-19 [1] Bioconductor 2021-06-04T00:45:08.2358285Z yaml 2.2.1 2020-02-01 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2359102Z zip 2.2.0 2021-05-31 [1] RSPM (R 4.1.0) 2021-06-04T00:45:08.2360235Z zlibbioc 1.38.0 2021-05-19 [1] Bioconductor 2021-06-04T00:45:08.2360610Z 2021-06-04T00:45:08.2361069Z [1] /home/runner/work/_temp/Library 2021-06-04T00:45:08.2361567Z [2] /opt/R/4.1.0/lib/R/library 2021-06-04T00:45:08.2391577Z ##[group]Run Rscript -e 'tic::script()' 2021-06-04T00:45:08.2392153Z Rscript -e 'tic::script()' 2021-06-04T00:45:08.2392562Z ls -l check 2021-06-04T00:45:08.2434982Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-06-04T00:45:08.2435481Z env: 2021-06-04T00:45:08.2435915Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:45:08.2436358Z TIC_DEPLOY_KEY: 2021-06-04T00:45:08.2437130Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:45:08.2438800Z GITHUB_PAT: *** 2021-06-04T00:45:08.2439872Z COVERALLS_TOKEN: *** 2021-06-04T00:45:08.2440345Z continue-on-error: false 2021-06-04T00:45:08.2440807Z VDIFFR_RUN_TESTS: 2021-06-04T00:45:08.2441268Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:45:08.2441701Z TZ: UTC 2021-06-04T00:45:08.2442081Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:45:08.2442469Z NOT_CRAN: true 2021-06-04T00:45:08.2442837Z ##[endgroup] 2021-06-04T00:45:08.4918251Z ✔ Loading tic stage configuration from tic.R 2021-06-04T00:45:08.6071310Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-06-04T00:45:08.6072257Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-06-04T00:45:08.6072924Z timeout = Inf, check_dir = "check") 2021-06-04T00:45:08.6618434Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-06-04T00:45:08.8591662Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-06-04T00:45:08.8713692Z * preparing ‘neuroCombat’: 2021-06-04T00:45:08.8810960Z * checking DESCRIPTION meta-information ... OK 2021-06-04T00:45:08.9609424Z * installing the package to build vignettes 2021-06-04T00:45:21.1518905Z * creating vignettes ... OK 2021-06-04T00:45:21.1791016Z * checking for LF line-endings in source and make files and shell scripts 2021-06-04T00:45:21.1797942Z * checking for empty or unneeded directories 2021-06-04T00:45:21.1874287Z * building ‘neuroCombat_1.0.13.tar.gz’ 2021-06-04T00:45:21.3954728Z 2021-06-04T00:45:21.5722018Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-06-04T00:45:21.7739776Z * using log directory ‘/home/runner/work/neuroCombat/neuroCombat/check/neuroCombat.Rcheck’ 2021-06-04T00:45:21.7741301Z * using R version 4.1.0 (2021-05-18) 2021-06-04T00:45:21.7742286Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-06-04T00:45:21.7743245Z * using session charset: UTF-8 2021-06-04T00:45:21.8871107Z * using option ‘--as-cran’ 2021-06-04T00:45:21.8892807Z * checking for file ‘neuroCombat/DESCRIPTION’ ... OK 2021-06-04T00:45:21.8894210Z * this is package ‘neuroCombat’ version ‘1.0.13’ 2021-06-04T00:45:21.8895289Z * package encoding: UTF-8 2021-06-04T00:45:21.8915006Z * checking package namespace information ... OK 2021-06-04T00:45:35.9638828Z * checking package dependencies ... OK 2021-06-04T00:45:35.9650348Z * checking if this is a source package ... OK 2021-06-04T00:45:35.9651418Z * checking if there is a namespace ... OK 2021-06-04T00:45:36.0783823Z * checking for executable files ... OK 2021-06-04T00:45:36.0785000Z * checking for hidden files and directories ... NOTE 2021-06-04T00:45:36.0785929Z Found the following hidden files and directories: 2021-06-04T00:45:36.0786650Z .travis.yml 2021-06-04T00:45:36.0788088Z These were most likely included in error. See section ‘Package 2021-06-04T00:45:36.0789199Z structure’ in the ‘Writing R Extensions’ manual. 2021-06-04T00:45:36.0792505Z * checking for portable file names ... OK 2021-06-04T00:45:36.0793493Z * checking for sufficient/correct file permissions ... OK 2021-06-04T00:45:37.9163204Z * checking whether package ‘neuroCombat’ can be installed ... OK 2021-06-04T00:45:37.9211257Z * checking installed package size ... OK 2021-06-04T00:45:38.0106968Z * checking package directory ... OK 2021-06-04T00:45:38.0108927Z * checking for future file timestamps ... OK 2021-06-04T00:45:38.0110530Z * checking ‘build’ directory ... OK 2021-06-04T00:45:38.1561388Z * checking DESCRIPTION meta-information ... OK 2021-06-04T00:45:38.1562581Z * checking top-level files ... OK 2021-06-04T00:45:38.1563442Z * checking for left-over files ... OK 2021-06-04T00:45:38.3059987Z * checking index information ... OK 2021-06-04T00:45:38.4588278Z * checking package subdirectories ... OK 2021-06-04T00:45:38.5013540Z * checking R files for non-ASCII characters ... OK 2021-06-04T00:45:38.5470632Z * checking R files for syntax errors ... OK 2021-06-04T00:45:38.7919474Z * checking whether the package can be loaded ... OK 2021-06-04T00:45:39.0488780Z * checking whether the package can be loaded with stated dependencies ... OK 2021-06-04T00:45:39.3053273Z * checking whether the package can be unloaded cleanly ... OK 2021-06-04T00:45:39.5340178Z * checking whether the namespace can be loaded with stated dependencies ... OK 2021-06-04T00:45:39.7840507Z * checking whether the namespace can be unloaded cleanly ... OK 2021-06-04T00:45:40.0380032Z * checking loading without being on the library search path ... OK 2021-06-04T00:45:40.3404158Z * checking dependencies in R code ... OK 2021-06-04T00:45:41.1868816Z * checking S3 generic/method consistency ... OK 2021-06-04T00:45:41.4524371Z * checking replacement functions ... OK 2021-06-04T00:45:41.7672118Z * checking foreign function calls ... OK 2021-06-04T00:45:44.8361713Z * checking R code for possible problems ... OK 2021-06-04T00:45:45.0153237Z * checking Rd files ... OK 2021-06-04T00:45:45.0587747Z * checking Rd metadata ... OK 2021-06-04T00:45:45.1168703Z * checking Rd line widths ... OK 2021-06-04T00:45:45.1925403Z * checking Rd cross-references ... OK 2021-06-04T00:45:45.4561102Z * checking for missing documentation entries ... OK 2021-06-04T00:45:46.2707399Z * checking for code/documentation mismatches ... OK 2021-06-04T00:45:47.2316090Z * checking Rd \usage sections ... OK 2021-06-04T00:45:47.3008214Z * checking Rd contents ... OK 2021-06-04T00:45:47.3503980Z * checking for unstated dependencies in examples ... OK 2021-06-04T00:45:47.3516381Z * checking contents of ‘data’ directory ... OK 2021-06-04T00:45:47.5142473Z * checking data for non-ASCII characters ... OK 2021-06-04T00:45:47.5143613Z * checking LazyData ... OK 2021-06-04T00:45:47.6752432Z * checking data for ASCII and uncompressed saves ... OK 2021-06-04T00:45:47.6796966Z * checking installed files from ‘inst/doc’ ... OK 2021-06-04T00:45:47.6828217Z * checking files in ‘vignettes’ ... OK 2021-06-04T00:45:47.8455656Z * checking examples ... NONE 2021-06-04T00:45:48.0064300Z * checking for unstated dependencies in vignettes ... OK 2021-06-04T00:45:48.0317451Z * checking package vignettes in ‘inst/doc’ ... OK 2021-06-04T00:45:58.5298445Z * checking re-building of vignette outputs ... OK 2021-06-04T00:46:00.1845905Z * checking PDF version of manual ... OK 2021-06-04T00:46:00.1847748Z * checking for non-standard things in the check directory ... OK 2021-06-04T00:46:00.1848731Z * checking for detritus in the temp directory ... OK 2021-06-04T00:46:00.1849409Z * DONE 2021-06-04T00:46:00.1875773Z 2021-06-04T00:46:00.1876365Z Status: 1 NOTE 2021-06-04T00:46:00.1876905Z See 2021-06-04T00:46:00.1878121Z ‘/home/runner/work/neuroCombat/neuroCombat/check/neuroCombat.Rcheck/00check.log’ 2021-06-04T00:46:00.1878997Z for details. 2021-06-04T00:46:00.1879576Z 2021-06-04T00:46:00.1879957Z 2021-06-04T00:46:00.2702441Z ── R CMD check results ───────────────────────────────── neuroCombat 1.0.13 ──── 2021-06-04T00:46:00.2718700Z Duration: 38.9s 2021-06-04T00:46:00.2719747Z 2021-06-04T00:46:00.2741541Z ❯ checking for hidden files and directories ... NOTE 2021-06-04T00:46:00.2742526Z Found the following hidden files and directories: 2021-06-04T00:46:00.2743236Z .travis.yml 2021-06-04T00:46:00.2744265Z These were most likely included in error. See section ‘Package 2021-06-04T00:46:00.2745371Z structure’ in the ‘Writing R Extensions’ manual. 2021-06-04T00:46:00.2745926Z 2021-06-04T00:46:00.2751470Z 0 errors ✔ | 0 warnings ✔ | 1 note ✖ 2021-06-04T00:46:00.2840966Z total 2844 2021-06-04T00:46:00.2842659Z drwxr-xr-x 5 runner docker 4096 Jun 4 00:46 neuroCombat.Rcheck 2021-06-04T00:46:00.2843963Z -rw-r--r-- 1 runner docker 1428694 Jun 4 00:45 neuroCombat_1.0.13.tar.gz 2021-06-04T00:46:00.2845995Z -rw-r--r-- 1 runner docker 1475993 Jun 4 00:45 neuroCombat_1.0.13_R_x86_64-pc-linux-gnu.tar.gz 2021-06-04T00:46:00.2881396Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-06-04T00:46:00.2882130Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-06-04T00:46:00.2924687Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-06-04T00:46:00.2925172Z env: 2021-06-04T00:46:00.2925605Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:46:00.2926068Z TIC_DEPLOY_KEY: 2021-06-04T00:46:00.2926832Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:46:00.2928469Z GITHUB_PAT: *** 2021-06-04T00:46:00.2929230Z COVERALLS_TOKEN: *** 2021-06-04T00:46:00.2929697Z continue-on-error: false 2021-06-04T00:46:00.2930165Z VDIFFR_RUN_TESTS: 2021-06-04T00:46:00.2930633Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:46:00.2931051Z TZ: UTC 2021-06-04T00:46:00.2931434Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:46:00.2931826Z NOT_CRAN: true 2021-06-04T00:46:00.2932188Z ##[endgroup] 2021-06-04T00:46:00.3048418Z ##[group]Run Rscript -e "tic::before_deploy()" 2021-06-04T00:46:00.3048995Z Rscript -e "tic::before_deploy()" 2021-06-04T00:46:00.3086644Z shell: /usr/bin/bash -e {0} 2021-06-04T00:46:00.3087032Z env: 2021-06-04T00:46:00.3087456Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:46:00.3087916Z TIC_DEPLOY_KEY: 2021-06-04T00:46:00.3088690Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:46:00.3089857Z GITHUB_PAT: *** 2021-06-04T00:46:00.3090619Z COVERALLS_TOKEN: *** 2021-06-04T00:46:00.3091097Z continue-on-error: false 2021-06-04T00:46:00.3091543Z VDIFFR_RUN_TESTS: 2021-06-04T00:46:00.3092052Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:46:00.3092491Z TZ: UTC 2021-06-04T00:46:00.3092857Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:46:00.3093269Z NOT_CRAN: true 2021-06-04T00:46:00.3093624Z ##[endgroup] 2021-06-04T00:46:00.5600935Z ✔ Loading tic stage configuration from tic.R 2021-06-04T00:46:00.6811301Z ##[group]Run actions/upload-release-asset@v1.0.1 2021-06-04T00:46:00.6811855Z with: 2021-06-04T00:46:00.6812672Z upload_url: https://uploads.github.com/repos/neuroconductor/neuroCombat/releases/44078169/assets{?name,label} 2021-06-04T00:46:00.6813723Z asset_path: check/neuroCombat_1.0.13_R_x86_64-pc-linux-gnu.tar.gz 2021-06-04T00:46:00.6814435Z asset_name: neuroCombat_1.0.13_R_x86_64-pc-linux-gnu_R4.0.tar.gz 2021-06-04T00:46:00.6815105Z asset_content_type: application/octet-stream 2021-06-04T00:46:00.6815586Z env: 2021-06-04T00:46:00.6815999Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:46:00.6816464Z TIC_DEPLOY_KEY: 2021-06-04T00:46:00.6817226Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:46:00.6818659Z GITHUB_PAT: *** 2021-06-04T00:46:00.6819505Z COVERALLS_TOKEN: *** 2021-06-04T00:46:00.6819984Z continue-on-error: false 2021-06-04T00:46:00.6820432Z VDIFFR_RUN_TESTS: 2021-06-04T00:46:00.6820936Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:46:00.6821380Z TZ: UTC 2021-06-04T00:46:00.6821762Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:46:00.6822153Z NOT_CRAN: true 2021-06-04T00:46:00.6823130Z GITHUB_TOKEN: *** 2021-06-04T00:46:00.6823498Z ##[endgroup] 2021-06-04T00:46:01.2787532Z ##[group]Run Rscript -e "tic::deploy()" 2021-06-04T00:46:01.2788091Z Rscript -e "tic::deploy()" 2021-06-04T00:46:01.2830282Z shell: /usr/bin/bash -e {0} 2021-06-04T00:46:01.2830680Z env: 2021-06-04T00:46:01.2831110Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:46:01.2831579Z TIC_DEPLOY_KEY: 2021-06-04T00:46:01.2832353Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:46:01.2834085Z GITHUB_PAT: *** 2021-06-04T00:46:01.2835052Z COVERALLS_TOKEN: *** 2021-06-04T00:46:01.2835548Z continue-on-error: false 2021-06-04T00:46:01.2836003Z VDIFFR_RUN_TESTS: 2021-06-04T00:46:01.2836472Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:46:01.2836891Z TZ: UTC 2021-06-04T00:46:01.2837271Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:46:01.2837675Z NOT_CRAN: true 2021-06-04T00:46:01.2838032Z ##[endgroup] 2021-06-04T00:46:01.5373746Z ✔ Loading tic stage configuration from tic.R 2021-06-04T00:46:01.6483197Z ##[group]Run Rscript -e "tic::after_deploy()" 2021-06-04T00:46:01.6483770Z Rscript -e "tic::after_deploy()" 2021-06-04T00:46:01.6526362Z shell: /usr/bin/bash -e {0} 2021-06-04T00:46:01.6526739Z env: 2021-06-04T00:46:01.6527182Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:46:01.6527631Z TIC_DEPLOY_KEY: 2021-06-04T00:46:01.6528400Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:46:01.6529850Z GITHUB_PAT: *** 2021-06-04T00:46:01.6530597Z COVERALLS_TOKEN: *** 2021-06-04T00:46:01.6531073Z continue-on-error: false 2021-06-04T00:46:01.6531534Z VDIFFR_RUN_TESTS: 2021-06-04T00:46:01.6531986Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:46:01.6532418Z TZ: UTC 2021-06-04T00:46:01.6532855Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:46:01.6533254Z NOT_CRAN: true 2021-06-04T00:46:01.6533625Z ##[endgroup] 2021-06-04T00:46:01.9011620Z ✔ Loading tic stage configuration from tic.R 2021-06-04T00:46:02.0133083Z ##[group]Run curl -s -H "Accept: application/json" \ 2021-06-04T00:46:02.0133739Z curl -s -H "Accept: application/json" \ 2021-06-04T00:46:02.0134326Z  -H "Content-Type: application/json" \ 2021-06-04T00:46:02.0134945Z  -H "Authorization: token $COVERALLS_TOKEN" \ 2021-06-04T00:46:02.0135589Z  -d '{"repo": {"service": "github","name": "'$GITHUB_REPOSITORY'"}}' \ 2021-06-04T00:46:02.0136295Z  -X POST https://coveralls.io/api/repos 2021-06-04T00:46:02.0192458Z shell: /usr/bin/bash -e {0} 2021-06-04T00:46:02.0192848Z env: 2021-06-04T00:46:02.0193274Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:46:02.0193738Z TIC_DEPLOY_KEY: 2021-06-04T00:46:02.0194523Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:46:02.0195841Z GITHUB_PAT: *** 2021-06-04T00:46:02.0196611Z COVERALLS_TOKEN: *** 2021-06-04T00:46:02.0197099Z continue-on-error: false 2021-06-04T00:46:02.0197603Z VDIFFR_RUN_TESTS: 2021-06-04T00:46:02.0198066Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:46:02.0198501Z TZ: UTC 2021-06-04T00:46:02.0198883Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:46:02.0199404Z NOT_CRAN: true 2021-06-04T00:46:02.0199775Z ##[endgroup] 2021-06-04T00:46:02.3669699Z {"errors":{"name":"has already been taken"}} 2021-06-04T00:46:02.3707720Z ##[group]Run echo "COVERALLS_REPO_TOKEN=$(\ 2021-06-04T00:46:02.3708403Z echo "COVERALLS_REPO_TOKEN=$(\ 2021-06-04T00:46:02.3709022Z  curl -s -H "Accept: application/json" \ 2021-06-04T00:46:02.3709703Z  -H "Content-Type: application/json" \ 2021-06-04T00:46:02.3710416Z  -H "Authorization: token $COVERALLS_TOKEN" \ 2021-06-04T00:46:02.3711263Z  https://coveralls.io/api/repos/github/$GITHUB_REPOSITORY \ 2021-06-04T00:46:02.3712011Z  | jq '.token')" >> $GITHUB_ENV 2021-06-04T00:46:02.3757022Z shell: /usr/bin/bash -e {0} 2021-06-04T00:46:02.3757522Z env: 2021-06-04T00:46:02.3757946Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:46:02.3758418Z TIC_DEPLOY_KEY: 2021-06-04T00:46:02.3759465Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:46:02.3760731Z GITHUB_PAT: *** 2021-06-04T00:46:02.3761641Z COVERALLS_TOKEN: *** 2021-06-04T00:46:02.3762180Z continue-on-error: false 2021-06-04T00:46:02.3762657Z VDIFFR_RUN_TESTS: 2021-06-04T00:46:02.3763115Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:46:02.3763557Z TZ: UTC 2021-06-04T00:46:02.3763942Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:46:02.3764336Z NOT_CRAN: true 2021-06-04T00:46:02.3764707Z ##[endgroup] 2021-06-04T00:46:02.6172674Z ##[group]Run covr::coveralls(service_name='drone', repo_token="PBFYBJzzwD2ZUQFkikFDHIuZEZ6oHwId0") 2021-06-04T00:46:02.6174480Z covr::coveralls(service_name='drone', repo_token="PBFYBJzzwD2ZUQFkikFDHIuZEZ6oHwId0") 2021-06-04T00:46:02.6181791Z shell: /usr/local/bin/Rscript {0} 2021-06-04T00:46:02.6182220Z env: 2021-06-04T00:46:02.6182636Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-06-04T00:46:02.6183093Z TIC_DEPLOY_KEY: 2021-06-04T00:46:02.6183856Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-06-04T00:46:02.6185076Z GITHUB_PAT: *** 2021-06-04T00:46:02.6185835Z COVERALLS_TOKEN: *** 2021-06-04T00:46:02.6186314Z continue-on-error: false 2021-06-04T00:46:02.6186764Z VDIFFR_RUN_TESTS: 2021-06-04T00:46:02.6187232Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-06-04T00:46:02.6187648Z TZ: UTC 2021-06-04T00:46:02.6188023Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-06-04T00:46:02.6188422Z NOT_CRAN: true 2021-06-04T00:46:02.6189164Z COVERALLS_REPO_TOKEN: "PBFYBJzzwD2ZUQFkikFDHIuZEZ6oHwId0" 2021-06-04T00:46:02.6189868Z ##[endgroup] 2021-06-04T00:46:05.7384328Z $message 2021-06-04T00:46:05.7384879Z [1] "Job ##4.1" 2021-06-04T00:46:05.7385158Z 2021-06-04T00:46:05.7385523Z $url 2021-06-04T00:46:05.7386125Z [1] "https://coveralls.io/jobs/81389648" 2021-06-04T00:46:05.7386593Z 2021-06-04T00:46:05.8902152Z Post job cleanup. 2021-06-04T00:46:05.9291046Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-06-04T00:46:05.9371526Z Post job cleanup. 2021-06-04T00:46:06.0278240Z [command]/usr/bin/git version 2021-06-04T00:46:06.0330967Z git version 2.31.1 2021-06-04T00:46:06.0361712Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-06-04T00:46:06.0399983Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-06-04T00:46:06.0623471Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-06-04T00:46:06.0653173Z http.https://github.com/.extraheader 2021-06-04T00:46:06.0662393Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-06-04T00:46:06.0699327Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-06-04T00:46:06.0971663Z Cleaning up orphan processes