2021-05-17T18:01:07.2986532Z ##[section]Starting: Request a runner to run this job 2021-05-17T18:01:07.9505028Z Can't find any online and idle self-hosted runner in current repository that matches the required labels: 'ubuntu-20.04' 2021-05-17T18:01:08.0296609Z Can't find any online and idle self-hosted runner in current repository's organization/enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-17T18:01:08.1149425Z Found online and idle hosted runner in current repository's enterprise account that matches the required labels: 'ubuntu-20.04' 2021-05-17T18:01:08.2534655Z ##[section]Finishing: Request a runner to run this job 2021-05-17T18:01:14.7057129Z Current runner version: '2.278.0' 2021-05-17T18:01:14.7082322Z ##[group]Operating System 2021-05-17T18:01:14.7083223Z Ubuntu 2021-05-17T18:01:14.7083634Z 20.04.2 2021-05-17T18:01:14.7084094Z LTS 2021-05-17T18:01:14.7084620Z ##[endgroup] 2021-05-17T18:01:14.7085139Z ##[group]Virtual Environment 2021-05-17T18:01:14.7085807Z Environment: ubuntu-20.04 2021-05-17T18:01:14.7086324Z Version: 20210510.0 2021-05-17T18:01:14.7087315Z Included Software: https://github.com/actions/virtual-environments/blob/ubuntu20/20210510.0/images/linux/Ubuntu2004-README.md 2021-05-17T18:01:14.7088675Z Image Release: https://github.com/actions/virtual-environments/releases/tag/ubuntu20%2F20210510.0 2021-05-17T18:01:14.7089500Z ##[endgroup] 2021-05-17T18:01:14.7091332Z ##[group]GITHUB_TOKEN Permissions 2021-05-17T18:01:14.7092481Z Actions: write 2021-05-17T18:01:14.7093023Z Checks: write 2021-05-17T18:01:14.7093495Z Contents: write 2021-05-17T18:01:14.7094039Z Deployments: write 2021-05-17T18:01:14.7094656Z Issues: write 2021-05-17T18:01:14.7095201Z Metadata: read 2021-05-17T18:01:14.7095804Z Packages: write 2021-05-17T18:01:14.7096313Z PullRequests: write 2021-05-17T18:01:14.7096944Z RepositoryProjects: write 2021-05-17T18:01:14.7097556Z SecurityEvents: write 2021-05-17T18:01:14.7098119Z Statuses: write 2021-05-17T18:01:14.7098914Z ##[endgroup] 2021-05-17T18:01:14.7101842Z Prepare workflow directory 2021-05-17T18:01:14.8068867Z Prepare all required actions 2021-05-17T18:01:14.8079280Z Getting action download info 2021-05-17T18:01:15.1803954Z Download action repository 'actions/checkout@v2' 2021-05-17T18:01:16.8927975Z Download action repository 'r-lib/actions@master' 2021-05-17T18:01:17.3981900Z Download action repository 'adigherman/actions@master' 2021-05-17T18:01:18.3732297Z Download action repository 'msys2/setup-msys2@v2' 2021-05-17T18:01:18.5681413Z Download action repository 'actions/cache@v1' 2021-05-17T18:01:18.7356935Z Download action repository 'actions/upload-artifact@master' 2021-05-17T18:01:18.9758014Z Download action repository 'actions/upload-release-asset@v1.0.1' 2021-05-17T18:01:19.2943476Z ##[group]Run actions/checkout@v2 2021-05-17T18:01:19.2944064Z with: 2021-05-17T18:01:19.2944539Z repository: neuroconductor/stapler 2021-05-17T18:01:19.2945495Z token: *** 2021-05-17T18:01:19.2945864Z ssh-strict: true 2021-05-17T18:01:19.2946358Z persist-credentials: true 2021-05-17T18:01:19.2946817Z clean: true 2021-05-17T18:01:19.2947201Z fetch-depth: 1 2021-05-17T18:01:19.2947572Z lfs: false 2021-05-17T18:01:19.2947954Z submodules: false 2021-05-17T18:01:19.2948327Z env: 2021-05-17T18:01:19.2948747Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:01:19.2949213Z TIC_DEPLOY_KEY: 2021-05-17T18:01:19.2949987Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:01:19.2951117Z GITHUB_PAT: *** 2021-05-17T18:01:19.2951893Z COVERALLS_TOKEN: *** 2021-05-17T18:01:19.2952377Z continue-on-error: true 2021-05-17T18:01:19.2952839Z VDIFFR_RUN_TESTS: 2021-05-17T18:01:19.2953229Z ##[endgroup] 2021-05-17T18:01:19.5026457Z Syncing repository: neuroconductor/stapler 2021-05-17T18:01:19.5027321Z ##[group]Getting Git version info 2021-05-17T18:01:19.5028464Z Working directory is '/home/runner/work/stapler/stapler' 2021-05-17T18:01:20.8953304Z [command]/usr/bin/git version 2021-05-17T18:01:20.8953831Z git version 2.31.1 2021-05-17T18:01:20.8955292Z ##[endgroup] 2021-05-17T18:01:20.8956136Z Deleting the contents of '/home/runner/work/stapler/stapler' 2021-05-17T18:01:20.8957404Z ##[group]Initializing the repository 2021-05-17T18:01:20.8958140Z [command]/usr/bin/git init /home/runner/work/stapler/stapler 2021-05-17T18:01:20.8959213Z hint: Using 'master' as the name for the initial branch. This default branch name 2021-05-17T18:01:20.8960128Z hint: is subject to change. To configure the initial branch name to use in all 2021-05-17T18:01:20.8961033Z hint: of your new repositories, which will suppress this warning, call: 2021-05-17T18:01:20.8961687Z hint: 2021-05-17T18:01:20.8962454Z hint: git config --global init.defaultBranch 2021-05-17T18:01:20.8963277Z hint: 2021-05-17T18:01:20.8964072Z hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and 2021-05-17T18:01:20.8965158Z hint: 'development'. The just-created branch can be renamed via this command: 2021-05-17T18:01:20.8965839Z hint: 2021-05-17T18:01:20.8966403Z hint: git branch -m 2021-05-17T18:01:20.8967138Z Initialized empty Git repository in /home/runner/work/stapler/stapler/.git/ 2021-05-17T18:01:20.8968198Z [command]/usr/bin/git remote add origin https://github.com/neuroconductor/stapler 2021-05-17T18:01:20.8968995Z ##[endgroup] 2021-05-17T18:01:20.8969591Z ##[group]Disabling automatic garbage collection 2021-05-17T18:01:20.8970461Z [command]/usr/bin/git config --local gc.auto 0 2021-05-17T18:01:20.8970998Z ##[endgroup] 2021-05-17T18:01:20.8972375Z ##[group]Setting up auth 2021-05-17T18:01:20.8973346Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-17T18:01:20.8974964Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-17T18:01:20.8976633Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-17T18:01:20.8978854Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-17T18:01:20.8985437Z [command]/usr/bin/git config --local http.https://github.com/.extraheader AUTHORIZATION: basic *** 2021-05-17T18:01:20.8986460Z ##[endgroup] 2021-05-17T18:01:20.8987015Z ##[group]Fetching the repository 2021-05-17T18:01:20.8988875Z [command]/usr/bin/git -c protocol.version=2 fetch --no-tags --prune --progress --no-recurse-submodules --depth=1 origin +6d4807a37a50dda2e127efbfcc7ae07fa60276d3:refs/tags/0.7.2.s 2021-05-17T18:01:20.8990576Z remote: Enumerating objects: 76, done. 2021-05-17T18:01:20.8991230Z remote: Counting objects: 1% (1/76) 2021-05-17T18:01:20.8991974Z remote: Counting objects: 2% (2/76) 2021-05-17T18:01:20.8992557Z remote: Counting objects: 3% (3/76) 2021-05-17T18:01:20.8993155Z remote: Counting objects: 5% (4/76) 2021-05-17T18:01:20.8993750Z remote: Counting objects: 6% (5/76) 2021-05-17T18:01:20.8994328Z remote: Counting objects: 7% (6/76) 2021-05-17T18:01:20.8994922Z remote: Counting objects: 9% (7/76) 2021-05-17T18:01:20.8995499Z remote: Counting objects: 10% (8/76) 2021-05-17T18:01:20.8996483Z remote: Counting objects: 11% (9/76) 2021-05-17T18:01:20.8997141Z remote: Counting objects: 13% (10/76) 2021-05-17T18:01:20.8997727Z remote: Counting objects: 14% (11/76) 2021-05-17T18:01:20.8998316Z remote: Counting objects: 15% (12/76) 2021-05-17T18:01:20.8998911Z remote: Counting objects: 17% (13/76) 2021-05-17T18:01:20.8999506Z remote: Counting objects: 18% (14/76) 2021-05-17T18:01:20.9000102Z remote: Counting objects: 19% (15/76) 2021-05-17T18:01:20.9000681Z remote: Counting objects: 21% (16/76) 2021-05-17T18:01:20.9001269Z remote: Counting objects: 22% (17/76) 2021-05-17T18:01:20.9001857Z remote: Counting objects: 23% (18/76) 2021-05-17T18:01:20.9002509Z remote: Counting objects: 25% (19/76) 2021-05-17T18:01:20.9003099Z remote: Counting objects: 26% (20/76) 2021-05-17T18:01:20.9003682Z remote: Counting objects: 27% (21/76) 2021-05-17T18:01:20.9004320Z remote: Counting objects: 28% (22/76) 2021-05-17T18:01:20.9005030Z remote: Counting objects: 30% (23/76) 2021-05-17T18:01:20.9005633Z remote: Counting objects: 31% (24/76) 2021-05-17T18:01:20.9006241Z remote: Counting objects: 32% (25/76) 2021-05-17T18:01:20.9006840Z remote: Counting objects: 34% (26/76) 2021-05-17T18:01:20.9007612Z remote: Counting objects: 35% (27/76) 2021-05-17T18:01:20.9008357Z remote: Counting objects: 36% (28/76) 2021-05-17T18:01:20.9008929Z remote: Counting objects: 38% (29/76) 2021-05-17T18:01:20.9009514Z remote: Counting objects: 39% (30/76) 2021-05-17T18:01:20.9010092Z remote: Counting objects: 40% (31/76) 2021-05-17T18:01:20.9010684Z remote: Counting objects: 42% (32/76) 2021-05-17T18:01:20.9011271Z remote: Counting objects: 43% (33/76) 2021-05-17T18:01:20.9011851Z remote: Counting objects: 44% (34/76) 2021-05-17T18:01:20.9012437Z remote: Counting objects: 46% (35/76) 2021-05-17T18:01:20.9013025Z remote: Counting objects: 47% (36/76) 2021-05-17T18:01:20.9013603Z remote: Counting objects: 48% (37/76) 2021-05-17T18:01:20.9014189Z remote: Counting objects: 50% (38/76) 2021-05-17T18:01:20.9014764Z remote: Counting objects: 51% (39/76) 2021-05-17T18:01:20.9015350Z remote: Counting objects: 52% (40/76) 2021-05-17T18:01:20.9015956Z remote: Counting objects: 53% (41/76) 2021-05-17T18:01:20.9016532Z remote: Counting objects: 55% (42/76) 2021-05-17T18:01:20.9017124Z remote: Counting objects: 56% (43/76) 2021-05-17T18:01:20.9017703Z remote: Counting objects: 57% (44/76) 2021-05-17T18:01:20.9018652Z remote: Counting objects: 59% (45/76) 2021-05-17T18:01:20.9019253Z remote: Counting objects: 60% (46/76) 2021-05-17T18:01:20.9019834Z remote: Counting objects: 61% (47/76) 2021-05-17T18:01:20.9020471Z remote: Counting objects: 63% (48/76) 2021-05-17T18:01:20.9021103Z remote: Counting objects: 64% (49/76) 2021-05-17T18:01:20.9021601Z remote: Counting objects: 65% (50/76) 2021-05-17T18:01:20.9022113Z remote: Counting objects: 67% (51/76) 2021-05-17T18:01:20.9022614Z remote: Counting objects: 68% (52/76) 2021-05-17T18:01:20.9023127Z remote: Counting objects: 69% (53/76) 2021-05-17T18:01:20.9023637Z remote: Counting objects: 71% (54/76) 2021-05-17T18:01:20.9024241Z remote: Counting objects: 72% (55/76) 2021-05-17T18:01:20.9024762Z remote: Counting objects: 73% (56/76) 2021-05-17T18:01:20.9025261Z remote: Counting objects: 75% (57/76) 2021-05-17T18:01:20.9025775Z remote: Counting objects: 76% (58/76) 2021-05-17T18:01:20.9026288Z remote: Counting objects: 77% (59/76) 2021-05-17T18:01:20.9026790Z remote: Counting objects: 78% (60/76) 2021-05-17T18:01:20.9027304Z remote: Counting objects: 80% (61/76) 2021-05-17T18:01:20.9027843Z remote: Counting objects: 81% (62/76) 2021-05-17T18:01:20.9028346Z remote: Counting objects: 82% (63/76) 2021-05-17T18:01:20.9028857Z remote: Counting objects: 84% (64/76) 2021-05-17T18:01:20.9029359Z remote: Counting objects: 85% (65/76) 2021-05-17T18:01:20.9029885Z remote: Counting objects: 86% (66/76) 2021-05-17T18:01:20.9030397Z remote: Counting objects: 88% (67/76) 2021-05-17T18:01:20.9030919Z remote: Counting objects: 89% (68/76) 2021-05-17T18:01:20.9031418Z remote: Counting objects: 90% (69/76) 2021-05-17T18:01:20.9031931Z remote: Counting objects: 92% (70/76) 2021-05-17T18:01:20.9032435Z remote: Counting objects: 93% (71/76) 2021-05-17T18:01:20.9032952Z remote: Counting objects: 94% (72/76) 2021-05-17T18:01:20.9033464Z remote: Counting objects: 96% (73/76) 2021-05-17T18:01:20.9033972Z remote: Counting objects: 97% (74/76) 2021-05-17T18:01:20.9034489Z remote: Counting objects: 98% (75/76) 2021-05-17T18:01:20.9034991Z remote: Counting objects: 100% (76/76) 2021-05-17T18:01:20.9035533Z remote: Counting objects: 100% (76/76), done. 2021-05-17T18:01:20.9036100Z remote: Compressing objects: 1% (1/69) 2021-05-17T18:01:20.9036655Z remote: Compressing objects: 2% (2/69) 2021-05-17T18:01:20.9037213Z remote: Compressing objects: 4% (3/69) 2021-05-17T18:01:20.9037857Z remote: Compressing objects: 5% (4/69) 2021-05-17T18:01:20.9038407Z remote: Compressing objects: 7% (5/69) 2021-05-17T18:01:20.9038968Z remote: Compressing objects: 8% (6/69) 2021-05-17T18:01:20.9039522Z remote: Compressing objects: 10% (7/69) 2021-05-17T18:01:20.9040078Z remote: Compressing objects: 11% (8/69) 2021-05-17T18:01:20.9040641Z remote: Compressing objects: 13% (9/69) 2021-05-17T18:01:20.9041192Z remote: Compressing objects: 14% (10/69) 2021-05-17T18:01:20.9041757Z remote: Compressing objects: 15% (11/69) 2021-05-17T18:01:20.9042311Z remote: Compressing objects: 17% (12/69) 2021-05-17T18:01:20.9042869Z remote: Compressing objects: 18% (13/69) 2021-05-17T18:01:20.9043427Z remote: Compressing objects: 20% (14/69) 2021-05-17T18:01:20.9043974Z remote: Compressing objects: 21% (15/69) 2021-05-17T18:01:20.9044545Z remote: Compressing objects: 23% (16/69) 2021-05-17T18:01:20.9045114Z remote: Compressing objects: 24% (17/69) 2021-05-17T18:01:20.9045658Z remote: Compressing objects: 26% (18/69) 2021-05-17T18:01:20.9046209Z remote: Compressing objects: 27% (19/69) 2021-05-17T18:01:20.9046798Z remote: Compressing objects: 28% (20/69) 2021-05-17T18:01:20.9047359Z remote: Compressing objects: 30% (21/69) 2021-05-17T18:01:20.9047926Z remote: Compressing objects: 31% (22/69) 2021-05-17T18:01:20.9048471Z remote: Compressing objects: 33% (23/69) 2021-05-17T18:01:20.9049141Z remote: Compressing objects: 34% (24/69) 2021-05-17T18:01:20.9049694Z remote: Compressing objects: 36% (25/69) 2021-05-17T18:01:20.9050251Z remote: Compressing objects: 37% (26/69) 2021-05-17T18:01:20.9050808Z remote: Compressing objects: 39% (27/69) 2021-05-17T18:01:20.9051354Z remote: Compressing objects: 40% (28/69) 2021-05-17T18:01:20.9051917Z remote: Compressing objects: 42% (29/69) 2021-05-17T18:01:20.9052559Z remote: Compressing objects: 43% (30/69) 2021-05-17T18:01:20.9053109Z remote: Compressing objects: 44% (31/69) 2021-05-17T18:01:20.9053668Z remote: Compressing objects: 46% (32/69) 2021-05-17T18:01:20.9054212Z remote: Compressing objects: 47% (33/69) 2021-05-17T18:01:20.9054837Z remote: Compressing objects: 49% (34/69) 2021-05-17T18:01:20.9055395Z remote: Compressing objects: 50% (35/69) 2021-05-17T18:01:20.9055942Z remote: Compressing objects: 52% (36/69) 2021-05-17T18:01:20.9056500Z remote: Compressing objects: 53% (37/69) 2021-05-17T18:01:20.9057052Z remote: Compressing objects: 55% (38/69) 2021-05-17T18:01:20.9057607Z remote: Compressing objects: 56% (39/69) 2021-05-17T18:01:20.9058171Z remote: Compressing objects: 57% (40/69) 2021-05-17T18:01:20.9058799Z remote: Compressing objects: 59% (41/69) 2021-05-17T18:01:20.9059359Z remote: Compressing objects: 60% (42/69) 2021-05-17T18:01:20.9059925Z remote: Compressing objects: 62% (43/69) 2021-05-17T18:01:20.9060473Z remote: Compressing objects: 63% (44/69) 2021-05-17T18:01:20.9061030Z remote: Compressing objects: 65% (45/69) 2021-05-17T18:01:20.9061574Z remote: Compressing objects: 66% (46/69) 2021-05-17T18:01:20.9062132Z remote: Compressing objects: 68% (47/69) 2021-05-17T18:01:20.9062694Z remote: Compressing objects: 69% (48/69) 2021-05-17T18:01:20.9063241Z remote: Compressing objects: 71% (49/69) 2021-05-17T18:01:20.9063798Z remote: Compressing objects: 72% (50/69) 2021-05-17T18:01:20.9064359Z remote: Compressing objects: 73% (51/69) 2021-05-17T18:01:20.9064905Z remote: Compressing objects: 75% (52/69) 2021-05-17T18:01:20.9065461Z remote: Compressing objects: 76% (53/69) 2021-05-17T18:01:20.9066010Z remote: Compressing objects: 78% (54/69) 2021-05-17T18:01:20.9066570Z remote: Compressing objects: 79% (55/69) 2021-05-17T18:01:20.9067218Z remote: Compressing objects: 81% (56/69) 2021-05-17T18:01:20.9067766Z remote: Compressing objects: 82% (57/69) 2021-05-17T18:01:20.9068326Z remote: Compressing objects: 84% (58/69) 2021-05-17T18:01:20.9068875Z remote: Compressing objects: 85% (59/69) 2021-05-17T18:01:20.9069643Z remote: Compressing objects: 86% (60/69) 2021-05-17T18:01:20.9070209Z remote: Compressing objects: 88% (61/69) 2021-05-17T18:01:20.9070755Z remote: Compressing objects: 89% (62/69) 2021-05-17T18:01:20.9071314Z remote: Compressing objects: 91% (63/69) 2021-05-17T18:01:20.9071876Z remote: Compressing objects: 92% (64/69) 2021-05-17T18:01:20.9072456Z remote: Compressing objects: 94% (65/69) 2021-05-17T18:01:20.9073013Z remote: Compressing objects: 95% (66/69) 2021-05-17T18:01:20.9073558Z remote: Compressing objects: 97% (67/69) 2021-05-17T18:01:20.9074112Z remote: Compressing objects: 98% (68/69) 2021-05-17T18:01:20.9074680Z remote: Compressing objects: 100% (69/69) 2021-05-17T18:01:20.9075252Z remote: Compressing objects: 100% (69/69), done. 2021-05-17T18:01:20.9076310Z remote: Total 76 (delta 12), reused 42 (delta 0), pack-reused 0 2021-05-17T18:01:20.9077048Z From https://github.com/neuroconductor/stapler 2021-05-17T18:01:20.9078068Z * [new ref] 6d4807a37a50dda2e127efbfcc7ae07fa60276d3 -> 0.7.2.s 2021-05-17T18:01:20.9078788Z ##[endgroup] 2021-05-17T18:01:20.9079273Z ##[group]Determining the checkout info 2021-05-17T18:01:20.9079754Z ##[endgroup] 2021-05-17T18:01:20.9080184Z ##[group]Checking out the ref 2021-05-17T18:01:20.9080937Z [command]/usr/bin/git checkout --progress --force refs/tags/0.7.2.s 2021-05-17T18:01:20.9081676Z Note: switching to 'refs/tags/0.7.2.s'. 2021-05-17T18:01:20.9081996Z 2021-05-17T18:01:20.9082693Z You are in 'detached HEAD' state. You can look around, make experimental 2021-05-17T18:01:20.9083644Z changes and commit them, and you can discard any commits you make in this 2021-05-17T18:01:20.9084527Z state without impacting any branches by switching back to a branch. 2021-05-17T18:01:20.9084962Z 2021-05-17T18:01:20.9085479Z If you want to create a new branch to retain commits you create, you may 2021-05-17T18:01:20.9086376Z do so (now or later) by using -c with the switch command. Example: 2021-05-17T18:01:20.9086783Z 2021-05-17T18:01:20.9087311Z git switch -c 2021-05-17T18:01:20.9087648Z 2021-05-17T18:01:20.9088030Z Or undo this operation with: 2021-05-17T18:01:20.9088323Z 2021-05-17T18:01:20.9088756Z git switch - 2021-05-17T18:01:20.9089001Z 2021-05-17T18:01:20.9089592Z Turn off this advice by setting config variable advice.detachedHead to false 2021-05-17T18:01:20.9090105Z 2021-05-17T18:01:20.9090504Z HEAD is now at 6d4807a Version id 83 stable 2021-05-17T18:01:20.9090968Z ##[endgroup] 2021-05-17T18:01:20.9091550Z [command]/usr/bin/git log -1 --format='%H' 2021-05-17T18:01:20.9092348Z '6d4807a37a50dda2e127efbfcc7ae07fa60276d3' 2021-05-17T18:01:20.9171426Z ##[group]Run r-lib/actions/setup-r@master 2021-05-17T18:01:20.9171899Z with: 2021-05-17T18:01:20.9172265Z r-version: devel 2021-05-17T18:01:20.9172628Z Ncpus: 1 2021-05-17T18:01:20.9173034Z crayon.enabled: NULL 2021-05-17T18:01:20.9173550Z remove-openmp-macos: true 2021-05-17T18:01:20.9174097Z http-user-agent: default 2021-05-17T18:01:20.9174554Z install-r: true 2021-05-17T18:01:20.9175102Z windows-path-include-mingw: true 2021-05-17T18:01:20.9175627Z env: 2021-05-17T18:01:20.9176043Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:01:20.9176505Z TIC_DEPLOY_KEY: 2021-05-17T18:01:20.9177286Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:01:20.9178508Z GITHUB_PAT: *** 2021-05-17T18:01:20.9179525Z COVERALLS_TOKEN: *** 2021-05-17T18:01:20.9179997Z continue-on-error: true 2021-05-17T18:01:20.9180446Z VDIFFR_RUN_TESTS: 2021-05-17T18:01:20.9180849Z ##[endgroup] 2021-05-17T18:01:22.0307249Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive add-apt-repository -y ppa:cran/travis 2021-05-17T18:01:23.7540589Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-17T18:01:23.7543480Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] 2021-05-17T18:01:23.7545750Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease [101 kB] 2021-05-17T18:01:23.7739050Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [109 kB] 2021-05-17T18:01:23.8134909Z Hit:5 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-17T18:01:23.8837271Z Get:6 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease [10.5 kB] 2021-05-17T18:01:23.8969520Z Hit:7 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-17T18:01:23.9691596Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [983 kB] 2021-05-17T18:01:23.9916293Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main Translation-en [222 kB] 2021-05-17T18:01:23.9919825Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 c-n-f Metadata [13.3 kB] 2021-05-17T18:01:23.9921503Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [226 kB] 2021-05-17T18:01:23.9945245Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/restricted Translation-en [33.3 kB] 2021-05-17T18:01:23.9956217Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [774 kB] 2021-05-17T18:01:24.0103047Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe Translation-en [166 kB] 2021-05-17T18:01:24.0121766Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 c-n-f Metadata [17.4 kB] 2021-05-17T18:01:24.0548098Z Get:16 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease [18.0 kB] 2021-05-17T18:01:24.2943123Z Get:17 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [655 kB] 2021-05-17T18:01:24.2966764Z Hit:18 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-17T18:01:24.3628198Z Get:19 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [132 kB] 2021-05-17T18:01:24.3642356Z Get:20 http://security.ubuntu.com/ubuntu focal-security/main amd64 c-n-f Metadata [7508 B] 2021-05-17T18:01:24.3649442Z Get:21 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [203 kB] 2021-05-17T18:01:24.3655259Z Get:22 http://security.ubuntu.com/ubuntu focal-security/restricted Translation-en [29.7 kB] 2021-05-17T18:01:24.3662034Z Get:23 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [565 kB] 2021-05-17T18:01:24.3801983Z Get:24 http://security.ubuntu.com/ubuntu focal-security/universe amd64 c-n-f Metadata [11.0 kB] 2021-05-17T18:01:24.4214475Z Get:25 https://packages.microsoft.com/ubuntu/20.04/prod focal/main amd64 Packages [73.2 kB] 2021-05-17T18:01:30.6195756Z Fetched 4463 kB in 1s (4766 kB/s) 2021-05-17T18:01:31.3953436Z Reading package lists... 2021-05-17T18:01:31.4179584Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get update -y -qq 2021-05-17T18:01:33.2015026Z [command]/usr/bin/sudo DEBIAN_FRONTEND=noninteractive apt-get install -y gdebi-core qpdf devscripts 2021-05-17T18:01:33.2660803Z Reading package lists... 2021-05-17T18:01:33.4222171Z Building dependency tree... 2021-05-17T18:01:33.4261491Z Reading state information... 2021-05-17T18:01:33.5679611Z The following additional packages will be installed: 2021-05-17T18:01:33.5681679Z dctrl-tools diffstat dput gettext intltool-debian libapt-pkg-perl 2021-05-17T18:01:33.5683114Z libarchive-zip-perl libarray-intspan-perl libasync-mergepoint-perl 2021-05-17T18:01:33.5684645Z libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl 2021-05-17T18:01:33.5686165Z libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl 2021-05-17T18:01:33.5687645Z libcommon-sense-perl libconst-fast-perl libcontextual-return-perl 2021-05-17T18:01:33.5688954Z libcpanel-json-xs-perl libcroco3 libdata-optlist-perl 2021-05-17T18:01:33.5690649Z libdevel-callchecker-perl libdevel-size-perl libdigest-bubblebabble-perl 2021-05-17T18:01:33.5692210Z libdigest-hmac-perl libdistro-info-perl libdynaloader-functions-perl 2021-05-17T18:01:33.5693547Z libemail-valid-perl libexporter-tiny-perl libfile-chdir-perl 2021-05-17T18:01:33.5694864Z libfile-find-rule-perl libfile-homedir-perl libfile-which-perl 2021-05-17T18:01:33.5696261Z libfont-ttf-perl libfuture-perl libgetopt-long-descriptive-perl 2021-05-17T18:01:33.5697609Z libgit-wrapper-perl libgitlab-api-v4-perl libhash-fieldhash-perl 2021-05-17T18:01:33.5699272Z libhttp-tiny-multipart-perl libimport-into-perl libio-async-loop-epoll-perl 2021-05-17T18:01:33.5700763Z libio-async-perl libio-prompter-perl libio-pty-perl libio-string-perl 2021-05-17T18:01:33.5702061Z libipc-run-perl libjson-maybexs-perl libjson-perl libjson-xs-perl 2021-05-17T18:01:33.5703427Z liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl 2021-05-17T18:01:33.5704670Z liblist-someutils-perl liblist-someutils-xs-perl 2021-05-17T18:01:33.5706129Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-17T18:01:33.5707746Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-17T18:01:33.5709075Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-17T18:01:33.5710331Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-17T18:01:33.5711585Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-17T18:01:33.5712961Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-17T18:01:33.5714500Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-17T18:01:33.5715855Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-17T18:01:33.5717213Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-17T18:01:33.5718705Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-17T18:01:33.5720084Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-17T18:01:33.5721549Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-17T18:01:33.5723027Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-17T18:01:33.5724404Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-17T18:01:33.5725939Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-17T18:01:33.5727418Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-17T18:01:33.5728843Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-17T18:01:33.5730230Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-17T18:01:33.5731598Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-17T18:01:33.5732917Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-17T18:01:33.5734180Z python3-magic python3-unidiff python3-xdg t1utils wdiff 2021-05-17T18:01:33.5734940Z Suggested packages: 2021-05-17T18:01:33.5735830Z debtags adequate autopkgtest bls-standalone bsd-mailx | mailx 2021-05-17T18:01:33.5736959Z check-all-the-things cvs-buildpackage debhelper devscripts-el diffoscope 2021-05-17T18:01:33.5738221Z disorderfs dose-extra duck faketime gnuplot how-can-i-help libdbd-pg-perl 2021-05-17T18:01:33.5739711Z libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts 2021-05-17T18:01:33.5740961Z mutt piuparts quilt ratt reprotest svn-buildpackage w3m debian-keyring 2021-05-17T18:01:33.5742130Z equivs libsoap-lite-perl python3-paramiko mini-dinstall gettext-doc 2021-05-17T18:01:33.5743372Z autopoint libasprintf-dev libgettextpo-dev libossp-uuid-perl 2021-05-17T18:01:33.5744658Z libscalar-number-perl libbareword-filehandles-perl libindirect-perl 2021-05-17T18:01:33.5746196Z libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl 2021-05-17T18:01:33.5747625Z binutils-multiarch libtext-template-perl wdiff-doc 2021-05-17T18:01:34.0349521Z The following NEW packages will be installed: 2021-05-17T18:01:34.0363925Z dctrl-tools devscripts diffstat dput gdebi-core gettext intltool-debian 2021-05-17T18:01:34.0369085Z libapt-pkg-perl libarchive-zip-perl libarray-intspan-perl 2021-05-17T18:01:34.0372502Z libasync-mergepoint-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl 2021-05-17T18:01:34.0377790Z libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl 2021-05-17T18:01:34.0379924Z libclone-perl libcommon-sense-perl libconst-fast-perl 2021-05-17T18:01:34.0381510Z libcontextual-return-perl libcpanel-json-xs-perl libcroco3 2021-05-17T18:01:34.0383300Z libdata-optlist-perl libdevel-callchecker-perl libdevel-size-perl 2021-05-17T18:01:34.0385160Z libdigest-bubblebabble-perl libdigest-hmac-perl libdistro-info-perl 2021-05-17T18:01:34.0387098Z libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl 2021-05-17T18:01:34.0388907Z libfile-chdir-perl libfile-find-rule-perl libfile-homedir-perl 2021-05-17T18:01:34.0390412Z libfile-which-perl libfont-ttf-perl libfuture-perl 2021-05-17T18:01:34.0392116Z libgetopt-long-descriptive-perl libgit-wrapper-perl libgitlab-api-v4-perl 2021-05-17T18:01:34.0394098Z libhash-fieldhash-perl libhttp-tiny-multipart-perl libimport-into-perl 2021-05-17T18:01:34.0395946Z libio-async-loop-epoll-perl libio-async-perl libio-prompter-perl 2021-05-17T18:01:34.0397648Z libio-pty-perl libio-string-perl libipc-run-perl libjson-maybexs-perl 2021-05-17T18:01:34.0401445Z libjson-perl libjson-xs-perl liblinux-epoll-perl liblist-compare-perl 2021-05-17T18:01:34.0403078Z liblist-moreutils-perl liblist-someutils-perl liblist-someutils-xs-perl 2021-05-17T18:01:34.0404929Z liblog-any-adapter-screen-perl liblog-any-perl libmodule-implementation-perl 2021-05-17T18:01:34.0406768Z libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmoox-struct-perl 2021-05-17T18:01:34.0408295Z libnamespace-clean-perl libnet-dns-perl libnet-dns-sec-perl 2021-05-17T18:01:34.0409775Z libnet-domain-tld-perl libnet-ip-perl libnet-libidn-perl 2021-05-17T18:01:34.0411166Z libnumber-compare-perl libnumber-range-perl libobject-id-perl 2021-05-17T18:01:34.0412802Z libpackage-stash-perl libpackage-stash-xs-perl libparams-classify-perl 2021-05-17T18:01:34.0414531Z libparams-util-perl libparams-validate-perl libpath-iterator-rule-perl 2021-05-17T18:01:34.0416096Z libpath-tiny-perl libperl4-corelibs-perl libperlio-gzip-perl 2021-05-17T18:01:34.0417679Z libpod-constants-perl libqpdf26 libre-engine-re2-perl libreadonly-perl 2021-05-17T18:01:34.0419535Z libref-util-perl libref-util-xs-perl libregexp-pattern-license-perl 2021-05-17T18:01:34.0421116Z libregexp-pattern-perl librole-tiny-perl libsereal-decoder-perl 2021-05-17T18:01:34.0422776Z libsereal-encoder-perl libsereal-perl libsort-key-perl libsort-versions-perl 2021-05-17T18:01:34.0424638Z libstrictures-perl libstring-copyright-perl libstring-escape-perl 2021-05-17T18:01:34.0426344Z libstring-shellquote-perl libstruct-dumb-perl libsub-exporter-perl 2021-05-17T18:01:34.0428099Z libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl 2021-05-17T18:01:34.0429800Z libsub-name-perl libsub-quote-perl libterm-readkey-perl libtest-fatal-perl 2021-05-17T18:01:34.0431410Z libtest-refcount-perl libtext-glob-perl libtext-levenshtein-perl 2021-05-17T18:01:34.0433006Z libtype-tiny-perl libtype-tiny-xs-perl libtypes-serialiser-perl 2021-05-17T18:01:34.0434513Z libunicode-utf8-perl libvariable-magic-perl libwant-perl libxml-writer-perl 2021-05-17T18:01:34.0435815Z libyaml-libyaml-perl licensecheck lintian patchutils python3-gpg 2021-05-17T18:01:34.0436864Z python3-magic python3-unidiff python3-xdg qpdf t1utils wdiff 2021-05-17T18:01:34.0572751Z 0 upgraded, 130 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:01:34.0573552Z Need to get 8648 kB of archives. 2021-05-17T18:01:34.0574408Z After this operation, 32.3 MB of additional disk space will be used. 2021-05-17T18:01:34.0575958Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dctrl-tools amd64 2.24-3 [61.5 kB] 2021-05-17T18:01:34.0600544Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-which-perl all 1.23-1 [13.8 kB] 2021-05-17T18:01:34.0605701Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-homedir-perl all 1.004-1 [37.3 kB] 2021-05-17T18:01:34.0617792Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-pty-perl amd64 1:1.12-1 [32.4 kB] 2021-05-17T18:01:34.0627704Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libipc-run-perl all 20180523.0-2 [89.7 kB] 2021-05-17T18:01:34.0647273Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-method-modifiers-perl all 2.13-1 [16.2 kB] 2021-05-17T18:01:34.0655563Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-op-check-perl amd64 0.22-1build2 [10.2 kB] 2021-05-17T18:01:34.0663561Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdynaloader-functions-perl all 0.003-1 [11.9 kB] 2021-05-17T18:01:34.0673362Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-callchecker-perl amd64 0.008-1ubuntu1 [14.5 kB] 2021-05-17T18:01:34.0686107Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-classify-perl amd64 0.015-1build2 [21.1 kB] 2021-05-17T18:01:34.0693126Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-runtime-perl all 0.016-1 [16.2 kB] 2021-05-17T18:01:34.0701077Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimport-into-perl all 1.002005-1 [11.0 kB] 2021-05-17T18:01:34.0707107Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librole-tiny-perl all 2.001004-1 [16.5 kB] 2021-05-17T18:01:34.0715171Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstrictures-perl all 2.000006-1 [16.3 kB] 2021-05-17T18:01:34.0721458Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-quote-perl all 2.006006-1 [19.5 kB] 2021-05-17T18:01:34.0734929Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoo-perl all 2.003006-1 [46.3 kB] 2021-05-17T18:01:34.0743523Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 patchutils amd64 0.3.4-2 [71.1 kB] 2021-05-17T18:01:34.0755189Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 wdiff amd64 1.2.2-2build1 [29.8 kB] 2021-05-17T18:01:34.0763752Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 devscripts amd64 2.20.2ubuntu2 [940 kB] 2021-05-17T18:01:34.0906029Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 diffstat amd64 1.63-1 [27.2 kB] 2021-05-17T18:01:34.0914530Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-gpg amd64 1.13.1-7ubuntu2 [165 kB] 2021-05-17T18:01:34.0942279Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 dput all 1.0.3ubuntu1 [42.3 kB] 2021-05-17T18:01:34.0952840Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdebi-core all 0.9.5.7+nmu3 [116 kB] 2021-05-17T18:01:34.0971333Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] 2021-05-17T18:01:34.0991886Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] 2021-05-17T18:01:34.1184646Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] 2021-05-17T18:01:34.1199705Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libapt-pkg-perl amd64 0.1.36build3 [68.5 kB] 2021-05-17T18:01:34.1223347Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] 2021-05-17T18:01:34.1276032Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarray-intspan-perl all 2.003-1 [23.3 kB] 2021-05-17T18:01:34.1281539Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasync-mergepoint-perl all 0.04-2 [10.2 kB] 2021-05-17T18:01:34.1287236Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmodule-implementation-perl all 0.09-1 [12.2 kB] 2021-05-17T18:01:34.1295236Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [6784 B] 2021-05-17T18:01:34.1300276Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvariable-magic-perl amd64 0.62-1build2 [34.4 kB] 2021-05-17T18:01:34.1314802Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libb-hooks-endofscope-perl all 0.24-1 [16.8 kB] 2021-05-17T18:01:34.1319875Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcapture-tiny-perl all 0.48-1 [20.4 kB] 2021-05-17T18:01:34.1324965Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclass-xsaccessor-perl amd64 1.19-3build3 [33.6 kB] 2021-05-17T18:01:34.1330005Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libclone-perl amd64 0.43-2 [11.0 kB] 2021-05-17T18:01:34.1334646Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcommon-sense-perl amd64 3.74-2build6 [20.1 kB] 2021-05-17T18:01:34.1344415Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-util-perl amd64 1.07-3build5 [19.7 kB] 2021-05-17T18:01:34.1350613Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-install-perl all 0.928-1 [10.5 kB] 2021-05-17T18:01:34.1357437Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdata-optlist-perl all 0.110-1 [9956 B] 2021-05-17T18:01:34.1364073Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-exporter-perl all 0.987-1 [44.9 kB] 2021-05-17T18:01:34.1381761Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libconst-fast-perl all 0.014-1 [7958 B] 2021-05-17T18:01:34.1388209Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwant-perl amd64 0.29-1build4 [24.2 kB] 2021-05-17T18:01:34.1456654Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcontextual-return-perl all 0.004014-2 [53.1 kB] 2021-05-17T18:01:34.1469942Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcpanel-json-xs-perl amd64 4.19-1build1 [109 kB] 2021-05-17T18:01:34.1495743Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-bubblebabble-perl all 0.02-2 [7908 B] 2021-05-17T18:01:34.1504470Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.3 kB] 2021-05-17T18:01:34.1519130Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdistro-info-perl all 0.23ubuntu1 [4668 B] 2021-05-17T18:01:34.1524904Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-ip-perl all 1.26-2 [27.4 kB] 2021-05-17T18:01:34.1533121Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-perl all 1.22-1 [336 kB] 2021-05-17T18:01:34.1611340Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-domain-tld-perl all 1.75-1 [29.1 kB] 2021-05-17T18:01:34.1620453Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libemail-valid-perl all 1.202-1 [16.3 kB] 2021-05-17T18:01:34.1627895Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libexporter-tiny-perl all 1.002001-1 [35.5 kB] 2021-05-17T18:01:34.1635506Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-chdir-perl all 0.1008-1 [11.7 kB] 2021-05-17T18:01:34.1643155Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-compare-perl all 0.03-1 [7318 B] 2021-05-17T18:01:34.1648920Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-glob-perl all 0.10-1 [7554 B] 2021-05-17T18:01:34.1654307Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfile-find-rule-perl all 0.34-1 [28.3 kB] 2021-05-17T18:01:34.1664565Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-string-perl all 1.08-3 [11.1 kB] 2021-05-17T18:01:34.1671433Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfont-ttf-perl all 1.06-1 [313 kB] 2021-05-17T18:01:34.1731507Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfuture-perl all 0.43-1 [77.8 kB] 2021-05-17T18:01:34.1749279Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libparams-validate-perl amd64 1.29-3 [52.7 kB] 2021-05-17T18:01:34.1766500Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgetopt-long-descriptive-perl all 0.104-1 [24.6 kB] 2021-05-17T18:01:34.1777255Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-versions-perl all 1.62-1 [9294 B] 2021-05-17T18:01:34.1807717Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgit-wrapper-perl all 0.048-1 [29.9 kB] 2021-05-17T18:01:34.1836769Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhttp-tiny-multipart-perl all 0.08-1 [8488 B] 2021-05-17T18:01:34.1838476Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-prompter-perl all 0.004015-1 [58.1 kB] 2021-05-17T18:01:34.1840006Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-perl all 4.02000-2 [80.9 kB] 2021-05-17T18:01:34.1841616Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-perl all 1.708-1 [67.8 kB] 2021-05-17T18:01:34.1844719Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblog-any-adapter-screen-perl all 0.140-1 [12.1 kB] 2021-05-17T18:01:34.1852213Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-perl all 0.38-1 [19.1 kB] 2021-05-17T18:01:34.1859899Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-identify-perl amd64 0.14-1build2 [10.7 kB] 2021-05-17T18:01:34.1864790Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsub-name-perl amd64 0.26-1 [11.5 kB] 2021-05-17T18:01:34.1871505Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnamespace-clean-perl all 0.27-1 [13.6 kB] 2021-05-17T18:01:34.1878192Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-tiny-perl all 0.108-1 [42.6 kB] 2021-05-17T18:01:34.1887671Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-perl all 1.008001-2 [304 kB] 2021-05-17T18:01:34.1943837Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgitlab-api-v4-perl all 0.25-1 [83.8 kB] 2021-05-17T18:01:34.1959056Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhash-fieldhash-perl amd64 0.15-1build2 [16.9 kB] 2021-05-17T18:01:34.1966456Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstruct-dumb-perl all 0.09-1 [10.5 kB] 2021-05-17T18:01:34.1976805Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-perl all 0.75-1 [254 kB] 2021-05-17T18:01:34.2022456Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.0 kB] 2021-05-17T18:01:34.2028251Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libio-async-loop-epoll-perl all 0.20-1 [10.4 kB] 2021-05-17T18:01:34.2034918Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtypes-serialiser-perl all 1.0-1 [12.1 kB] 2021-05-17T18:01:34.2041137Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-xs-perl amd64 4.020-1build1 [83.7 kB] 2021-05-17T18:01:34.2063896Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjson-maybexs-perl all 1.004000-1 [11.0 kB] 2021-05-17T18:01:34.2070595Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-compare-perl all 0.53-1 [65.6 kB] 2021-05-17T18:01:34.2090740Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-moreutils-perl amd64 0.416-1build5 [55.5 kB] 2021-05-17T18:01:34.2103639Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-perl all 0.58-1 [29.7 kB] 2021-05-17T18:01:34.2110633Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liblist-someutils-xs-perl amd64 0.58-2 [32.5 kB] 2021-05-17T18:01:34.2120277Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-aliases-perl all 0.001006-1 [7176 B] 2021-05-17T18:01:34.2126775Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libobject-id-perl all 0.1.2-2ubuntu1 [15.9 kB] 2021-05-17T18:01:34.2133353Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmoox-struct-perl all 0.017-1 [23.4 kB] 2021-05-17T18:01:34.2143476Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-dns-sec-perl amd64 1.15-1 [44.6 kB] 2021-05-17T18:01:34.2152699Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnet-libidn-perl amd64 0.12.ds-3build2 [17.3 kB] 2021-05-17T18:01:34.2161771Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnumber-range-perl all 0.12-1 [8556 B] 2021-05-17T18:01:34.2212974Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpackage-stash-xs-perl amd64 0.29-1build1 [18.4 kB] 2021-05-17T18:01:34.2214721Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpath-iterator-rule-perl all 1.014-1 [49.5 kB] 2021-05-17T18:01:34.2216465Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperl4-corelibs-perl all 0.004-2 [37.4 kB] 2021-05-17T18:01:34.2219109Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libperlio-gzip-perl amd64 0.19-1build5 [14.6 kB] 2021-05-17T18:01:34.2220687Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpod-constants-perl all 0.19-1 [16.0 kB] 2021-05-17T18:01:34.2222169Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqpdf26 amd64 9.1.1-1build1 [421 kB] 2021-05-17T18:01:34.2302641Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libre-engine-re2-perl amd64 0.13-5 [16.2 kB] 2021-05-17T18:01:34.2324939Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libreadonly-perl all 2.050-2 [19.9 kB] 2021-05-17T18:01:34.2331118Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-perl all 0.204-1 [15.0 kB] 2021-05-17T18:01:34.2336344Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libref-util-xs-perl amd64 0.117-1build2 [12.0 kB] 2021-05-17T18:01:34.2342201Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-license-perl all 3.2.0-1 [36.2 kB] 2021-05-17T18:01:34.2350067Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libregexp-pattern-perl all 0.2.12-1 [17.1 kB] 2021-05-17T18:01:34.2355301Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-decoder-perl amd64 4.011+ds-1build1 [102 kB] 2021-05-17T18:01:34.2366193Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-encoder-perl amd64 4.011+ds-1build1 [104 kB] 2021-05-17T18:01:34.2377490Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsereal-perl all 4.011-1 [8604 B] 2021-05-17T18:01:34.2382540Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsort-key-perl amd64 1.33-2build2 [35.4 kB] 2021-05-17T18:01:34.2394727Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-copyright-perl all 0.003006-1 [9608 B] 2021-05-17T18:01:34.2402054Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-escape-perl all 2010.002-2 [17.6 kB] 2021-05-17T18:01:34.2414253Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libstring-shellquote-perl all 1.04-1 [12.0 kB] 2021-05-17T18:01:34.2469349Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libterm-readkey-perl amd64 2.38-1build1 [24.6 kB] 2021-05-17T18:01:34.2470934Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-fatal-perl all 0.014-1 [11.1 kB] 2021-05-17T18:01:34.2473324Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtest-refcount-perl all 0.10-1 [11.4 kB] 2021-05-17T18:01:34.2474895Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtext-levenshtein-perl all 0.13-1 [9612 B] 2021-05-17T18:01:34.2476498Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtype-tiny-xs-perl amd64 0.016-1 [22.9 kB] 2021-05-17T18:01:34.2478927Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libunicode-utf8-perl amd64 0.62-1build1 [18.1 kB] 2021-05-17T18:01:34.2480656Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxml-writer-perl all 0.625-1 [24.9 kB] 2021-05-17T18:01:34.2483050Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [28.5 kB] 2021-05-17T18:01:34.2484548Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 licensecheck all 3.0.45-1 [23.9 kB] 2021-05-17T18:01:34.2485991Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdevel-size-perl amd64 0.83-1build1 [20.0 kB] 2021-05-17T18:01:34.2488215Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 t1utils amd64 1.41-3 [56.1 kB] 2021-05-17T18:01:34.2489366Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 lintian all 2.62.0 [980 kB] 2021-05-17T18:01:34.2536608Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-unidiff all 0.5.5-2 [9180 B] 2021-05-17T18:01:34.2538081Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-xdg all 0.26-1ubuntu1 [36.1 kB] 2021-05-17T18:01:34.2545178Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qpdf amd64 9.1.1-1build1 [476 kB] 2021-05-17T18:01:34.2591585Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-magic all 2:0.4.15-3 [9376 B] 2021-05-17T18:01:34.9405934Z Fetched 8648 kB in 0s (40.2 MB/s) 2021-05-17T18:01:34.9722941Z Selecting previously unselected package dctrl-tools. 2021-05-17T18:01:34.9911788Z (Reading database ... 2021-05-17T18:01:34.9912268Z (Reading database ... 5% 2021-05-17T18:01:34.9912775Z (Reading database ... 10% 2021-05-17T18:01:34.9913197Z (Reading database ... 15% 2021-05-17T18:01:34.9913632Z (Reading database ... 20% 2021-05-17T18:01:34.9914062Z (Reading database ... 25% 2021-05-17T18:01:34.9942809Z (Reading database ... 30% 2021-05-17T18:01:34.9943304Z (Reading database ... 35% 2021-05-17T18:01:34.9943746Z (Reading database ... 40% 2021-05-17T18:01:34.9944229Z (Reading database ... 45% 2021-05-17T18:01:34.9944660Z (Reading database ... 50% 2021-05-17T18:01:35.0166773Z (Reading database ... 55% 2021-05-17T18:01:35.0651491Z (Reading database ... 60% 2021-05-17T18:01:35.1029856Z (Reading database ... 65% 2021-05-17T18:01:35.1390075Z (Reading database ... 70% 2021-05-17T18:01:35.2090994Z (Reading database ... 75% 2021-05-17T18:01:35.2899494Z (Reading database ... 80% 2021-05-17T18:01:35.3711842Z (Reading database ... 85% 2021-05-17T18:01:35.4331487Z (Reading database ... 90% 2021-05-17T18:01:35.4861757Z (Reading database ... 95% 2021-05-17T18:01:35.4863006Z (Reading database ... 100% 2021-05-17T18:01:35.4863885Z (Reading database ... 254809 files and directories currently installed.) 2021-05-17T18:01:35.4984034Z Preparing to unpack .../000-dctrl-tools_2.24-3_amd64.deb ... 2021-05-17T18:01:35.5083902Z Unpacking dctrl-tools (2.24-3) ... 2021-05-17T18:01:35.5380846Z Selecting previously unselected package libfile-which-perl. 2021-05-17T18:01:35.5620618Z Preparing to unpack .../001-libfile-which-perl_1.23-1_all.deb ... 2021-05-17T18:01:35.5628066Z Unpacking libfile-which-perl (1.23-1) ... 2021-05-17T18:01:35.5902082Z Selecting previously unselected package libfile-homedir-perl. 2021-05-17T18:01:35.6129077Z Preparing to unpack .../002-libfile-homedir-perl_1.004-1_all.deb ... 2021-05-17T18:01:35.6138911Z Unpacking libfile-homedir-perl (1.004-1) ... 2021-05-17T18:01:35.6460487Z Selecting previously unselected package libio-pty-perl. 2021-05-17T18:01:35.6649575Z Preparing to unpack .../003-libio-pty-perl_1%3a1.12-1_amd64.deb ... 2021-05-17T18:01:35.6662462Z Unpacking libio-pty-perl (1:1.12-1) ... 2021-05-17T18:01:35.6894605Z Selecting previously unselected package libipc-run-perl. 2021-05-17T18:01:35.7167321Z Preparing to unpack .../004-libipc-run-perl_20180523.0-2_all.deb ... 2021-05-17T18:01:35.7172511Z Unpacking libipc-run-perl (20180523.0-2) ... 2021-05-17T18:01:35.7540381Z Selecting previously unselected package libclass-method-modifiers-perl. 2021-05-17T18:01:35.7735949Z Preparing to unpack .../005-libclass-method-modifiers-perl_2.13-1_all.deb ... 2021-05-17T18:01:35.7747477Z Unpacking libclass-method-modifiers-perl (2.13-1) ... 2021-05-17T18:01:35.7985711Z Selecting previously unselected package libb-hooks-op-check-perl. 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2021-05-17T18:02:04.7912387Z [command]sudo apt-get install -y texinfo 2021-05-17T18:02:04.9597165Z Reading package lists... 2021-05-17T18:02:05.1266720Z Building dependency tree... 2021-05-17T18:02:05.1287457Z Reading state information... 2021-05-17T18:02:05.3343639Z texinfo is already the newest version (6.7.0.dfsg.2-5). 2021-05-17T18:02:05.3346295Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:05.6134022Z [command]sh /home/runner/work/_temp/install-unx.sh 2021-05-17T18:02:05.6270324Z --2021-05-17 18:02:05-- https://yihui.org/tinytex/TinyTeX-1.tar.gz 2021-05-17T18:02:05.6302810Z Resolving yihui.org (yihui.org)... 76.223.126.88 2021-05-17T18:02:05.6369512Z Connecting to yihui.org (yihui.org)|76.223.126.88|:443... connected. 2021-05-17T18:02:05.6657314Z HTTP request sent, awaiting response... 301 Moved Permanently 2021-05-17T18:02:05.6659901Z Location: https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu [following] 2021-05-17T18:02:05.6661943Z --2021-05-17 18:02:05-- https://ci.appveyor.com/api/projects/yihui/tinytex/artifacts/TinyTeX-1.tar.gz?job=image%3A%20Ubuntu 2021-05-17T18:02:05.7524336Z Resolving ci.appveyor.com (ci.appveyor.com)... 138.91.141.243 2021-05-17T18:02:05.8119941Z Connecting to ci.appveyor.com (ci.appveyor.com)|138.91.141.243|:443... connected. 2021-05-17T18:02:06.0156591Z HTTP request sent, awaiting response... 302 Found 2021-05-17T18:02:06.0161134Z Location: https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1550/guvetqs88lxl2mv0/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=mdcBUHizqf0jcBczAhd2nr9HskzvjrV41Dm7MoMxNnE%3D&st=2021-05-17T18%3A01%3A05Z&se=2021-05-17T18%3A07%3A05Z&sp=r [following] 2021-05-17T18:02:06.0165795Z --2021-05-17 18:02:06-- https://appveyorcidata.blob.core.windows.net/yihui-27038/tinytex/1-0-1550/guvetqs88lxl2mv0/TinyTeX-1.tar.gz?sv=2015-12-11&sr=c&sig=mdcBUHizqf0jcBczAhd2nr9HskzvjrV41Dm7MoMxNnE%3D&st=2021-05-17T18%3A01%3A05Z&se=2021-05-17T18%3A07%3A05Z&sp=r 2021-05-17T18:02:06.0430359Z Resolving appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)... 52.239.228.196 2021-05-17T18:02:06.1021357Z Connecting to appveyorcidata.blob.core.windows.net (appveyorcidata.blob.core.windows.net)|52.239.228.196|:443... connected. 2021-05-17T18:02:06.3411368Z HTTP request sent, awaiting response... 200 OK 2021-05-17T18:02:06.3412770Z Length: 67306919 (64M) [application/octet-stream] 2021-05-17T18:02:06.3414502Z Saving to: ‘TinyTeX.tar.gz’ 2021-05-17T18:02:06.9355328Z 2021-05-17T18:02:08.4108046Z 0K ........ ........ ........ ........ 49% 16.1M 2s 2021-05-17T18:02:09.5160028Z 32768K ........ ........ ........ ........ 99% 28.5M 0s 2021-05-17T18:02:09.5161300Z 65536K 100% 3.08M=3.2s 2021-05-17T18:02:09.5162122Z 2021-05-17T18:02:09.5164065Z 2021-05-17 18:02:09 (20.2 MB/s) - ‘TinyTeX.tar.gz’ saved [67306919/67306919] 2021-05-17T18:02:09.5164567Z 2021-05-17T18:02:11.2530368Z tlmgr: setting option sys_bin to /home/runner/bin. 2021-05-17T18:02:11.2532058Z tlmgr: updating /home/runner/.TinyTeX/tlpkg/texlive.tlpdb 2021-05-17T18:02:11.5251088Z ##[group]Run tlmgr update --self 2021-05-17T18:02:11.5251662Z tlmgr update --self 2021-05-17T18:02:11.5252540Z tlmgr install filecontents upquote courier courier-scaled biber biblatex collection-luatex ae thumbpdf grfext 2021-05-17T18:02:11.5253394Z tlmgr update --all 2021-05-17T18:02:11.5297411Z shell: /usr/bin/bash -e {0} 2021-05-17T18:02:11.5297811Z env: 2021-05-17T18:02:11.5298242Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:02:11.5300335Z TIC_DEPLOY_KEY: 2021-05-17T18:02:11.5301136Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:02:11.5302836Z GITHUB_PAT: *** 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https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:02:22.1097006Z GITHUB_PAT: *** 2021-05-17T18:02:22.1097902Z COVERALLS_TOKEN: *** 2021-05-17T18:02:22.1098452Z continue-on-error: true 2021-05-17T18:02:22.1099110Z VDIFFR_RUN_TESTS: 2021-05-17T18:02:22.1099661Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:02:22.1100167Z TZ: UTC 2021-05-17T18:02:22.1100615Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:02:22.1101097Z NOT_CRAN: true 2021-05-17T18:02:22.1101506Z ##[endgroup] 2021-05-17T18:02:22.5519730Z [command]sudo apt-get install -y gdebi-core 2021-05-17T18:02:22.6165579Z Reading package lists... 2021-05-17T18:02:22.7866170Z Building dependency tree... 2021-05-17T18:02:22.7884770Z Reading state information... 2021-05-17T18:02:23.0193483Z gdebi-core is already the newest version (0.9.5.7+nmu3). 2021-05-17T18:02:23.0194384Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:23.0220575Z [command]sudo gdebi --non-interactive /home/runner/work/_temp/pandoc-2.7.3-1-amd64.deb 2021-05-17T18:02:23.1346864Z 2021-05-17T18:02:23.1503048Z Reading package lists... 0% 2021-05-17T18:02:23.1503992Z 2021-05-17T18:02:23.1546535Z Reading package lists... 100% 2021-05-17T18:02:23.1547252Z 2021-05-17T18:02:23.1547652Z 2021-05-17T18:02:23.1548295Z Reading package lists... 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2021-05-17T18:02:23.6572706Z 2021-05-17T18:02:23.6573221Z Reading state information... 87% 2021-05-17T18:02:23.6610625Z 2021-05-17T18:02:23.6611167Z Reading state information... 89% 2021-05-17T18:02:23.6647327Z 2021-05-17T18:02:23.6647865Z Reading state information... 91% 2021-05-17T18:02:23.6686854Z 2021-05-17T18:02:23.6687396Z Reading state information... 93% 2021-05-17T18:02:23.6725551Z 2021-05-17T18:02:23.6726067Z Reading state information... 95% 2021-05-17T18:02:23.6766654Z 2021-05-17T18:02:23.6767190Z Reading state information... 97% 2021-05-17T18:02:23.6804408Z 2021-05-17T18:02:23.6804967Z Reading state information... 99% 2021-05-17T18:02:23.9464542Z Selecting previously unselected package pandoc. 2021-05-17T18:02:24.0719678Z (Reading database ... 261973 files and directories currently installed.) 2021-05-17T18:02:24.0845462Z Preparing to unpack .../_temp/pandoc-2.7.3-1-amd64.deb ... 2021-05-17T18:02:24.0855647Z Unpacking pandoc (2.7.3-1) ... 2021-05-17T18:02:26.0321572Z Setting up pandoc (2.7.3-1) ... 2021-05-17T18:02:26.0374906Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:02:26.7659673Z 2021-05-17T18:02:26.7660637Z 2021-05-17T18:02:26.7661351Z Reading state information... Done 2021-05-17T18:02:26.7947011Z ##[group]Run git config user.name adigherman 2021-05-17T18:02:26.7947715Z git config user.name adigherman 2021-05-17T18:02:26.7948303Z git config user.email adig@jhu.edu 2021-05-17T18:02:26.7989728Z shell: /usr/bin/bash -e {0} 2021-05-17T18:02:26.7990129Z env: 2021-05-17T18:02:26.7990597Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:02:26.7991078Z TIC_DEPLOY_KEY: 2021-05-17T18:02:26.7991887Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:02:26.7993768Z GITHUB_PAT: *** 2021-05-17T18:02:26.7994663Z COVERALLS_TOKEN: *** 2021-05-17T18:02:26.7995170Z continue-on-error: true 2021-05-17T18:02:26.7995669Z VDIFFR_RUN_TESTS: 2021-05-17T18:02:26.7996150Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:02:26.7996610Z TZ: UTC 2021-05-17T18:02:26.7996997Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:02:26.7997422Z NOT_CRAN: true 2021-05-17T18:02:26.7997821Z ##[endgroup] 2021-05-17T18:02:26.8197676Z ##[group]Run adigherman/actions/install-sysdeps-linux@master 2021-05-17T18:02:26.8198301Z env: 2021-05-17T18:02:26.8198762Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:02:26.8199230Z TIC_DEPLOY_KEY: 2021-05-17T18:02:26.8200012Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:02:26.8201675Z GITHUB_PAT: *** 2021-05-17T18:02:26.8202456Z COVERALLS_TOKEN: *** 2021-05-17T18:02:26.8202925Z continue-on-error: true 2021-05-17T18:02:26.8203389Z VDIFFR_RUN_TESTS: 2021-05-17T18:02:26.8203853Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:02:26.8204293Z TZ: UTC 2021-05-17T18:02:26.8204681Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:02:26.8205083Z NOT_CRAN: true 2021-05-17T18:02:26.8205450Z ##[endgroup] 2021-05-17T18:02:27.0021715Z Reading package lists... 2021-05-17T18:02:27.1610821Z Building dependency tree... 2021-05-17T18:02:27.1626903Z Reading state information... 2021-05-17T18:02:27.2911357Z The following additional packages will be installed: 2021-05-17T18:02:27.2914276Z cmake-data libjsoncpp1 librhash0 2021-05-17T18:02:27.2919680Z Suggested packages: 2021-05-17T18:02:27.2920487Z cmake-doc ninja-build 2021-05-17T18:02:27.3354489Z The following NEW packages will be installed: 2021-05-17T18:02:27.3361149Z cmake cmake-data libjsoncpp1 librhash0 2021-05-17T18:02:27.3543498Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:27.3544526Z Need to get 5470 kB of archives. 2021-05-17T18:02:27.3545638Z After this operation, 28.3 MB of additional disk space will be used. 2021-05-17T18:02:27.3547439Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] 2021-05-17T18:02:27.3736915Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] 2021-05-17T18:02:27.3743850Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] 2021-05-17T18:02:27.3752650Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] 2021-05-17T18:02:27.7904062Z Fetched 5470 kB in 0s (89.0 MB/s) 2021-05-17T18:02:27.8281339Z Selecting previously unselected package cmake-data. 2021-05-17T18:02:27.8352282Z (Reading database ... 2021-05-17T18:02:27.8353092Z (Reading database ... 5% 2021-05-17T18:02:27.8353752Z (Reading database ... 10% 2021-05-17T18:02:27.8354471Z (Reading database ... 15% 2021-05-17T18:02:27.8355131Z (Reading database ... 20% 2021-05-17T18:02:27.8355766Z (Reading database ... 25% 2021-05-17T18:02:27.8356420Z (Reading database ... 30% 2021-05-17T18:02:27.8357074Z (Reading database ... 35% 2021-05-17T18:02:27.8357707Z (Reading database ... 40% 2021-05-17T18:02:27.8358352Z (Reading database ... 45% 2021-05-17T18:02:27.8359004Z (Reading database ... 50% 2021-05-17T18:02:27.8389966Z (Reading database ... 55% 2021-05-17T18:02:27.8424259Z (Reading database ... 60% 2021-05-17T18:02:27.8461065Z (Reading database ... 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librhash0:amd64. 2021-05-17T18:02:28.5624268Z Preparing to unpack .../librhash0_1.3.9-1_amd64.deb ... 2021-05-17T18:02:28.5644210Z Unpacking librhash0:amd64 (1.3.9-1) ... 2021-05-17T18:02:28.5980993Z Selecting previously unselected package cmake. 2021-05-17T18:02:28.6260261Z Preparing to unpack .../cmake_3.16.3-1ubuntu1_amd64.deb ... 2021-05-17T18:02:28.6283406Z Unpacking cmake (3.16.3-1ubuntu1) ... 2021-05-17T18:02:29.0221101Z Setting up librhash0:amd64 (1.3.9-1) ... 2021-05-17T18:02:29.0248356Z Setting up cmake-data (3.16.3-1ubuntu1) ... 2021-05-17T18:02:29.0617905Z Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... 2021-05-17T18:02:29.0644855Z Setting up cmake (3.16.3-1ubuntu1) ... 2021-05-17T18:02:29.0677486Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:02:30.1381093Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:02:32.1353032Z Reading package lists... 2021-05-17T18:02:32.3010954Z Building dependency tree... 2021-05-17T18:02:32.3027277Z Reading state information... 2021-05-17T18:02:32.4517026Z Suggested packages: 2021-05-17T18:02:32.4518779Z libssh-doc 2021-05-17T18:02:32.4986126Z The following NEW packages will be installed: 2021-05-17T18:02:32.4989335Z libssh-dev 2021-05-17T18:02:32.5155992Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:32.5156872Z Need to get 219 kB of archives. 2021-05-17T18:02:32.5157734Z After this operation, 1127 kB of additional disk space will be used. 2021-05-17T18:02:32.5160156Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-dev amd64 0.9.3-2ubuntu2.1 [219 kB] 2021-05-17T18:02:32.9064209Z Fetched 219 kB in 0s (12.1 MB/s) 2021-05-17T18:02:32.9347811Z Selecting previously unselected package libssh-dev:amd64. 2021-05-17T18:02:32.9417360Z (Reading database ... 2021-05-17T18:02:32.9418133Z (Reading database ... 5% 2021-05-17T18:02:32.9418939Z (Reading database ... 10% 2021-05-17T18:02:32.9419534Z (Reading database ... 15% 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and directories currently installed.) 2021-05-17T18:02:33.0725454Z Preparing to unpack .../libssh-dev_0.9.3-2ubuntu2.1_amd64.deb ... 2021-05-17T18:02:33.0733356Z Unpacking libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-17T18:02:33.1562676Z Setting up libssh-dev:amd64 (0.9.3-2ubuntu2.1) ... 2021-05-17T18:02:35.1581188Z Reading package lists... 2021-05-17T18:02:35.3370797Z Building dependency tree... 2021-05-17T18:02:35.3388205Z Reading state information... 2021-05-17T18:02:35.5357333Z The following NEW packages will be installed: 2021-05-17T18:02:35.5365508Z jags 2021-05-17T18:02:35.5543807Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:35.5544924Z Need to get 1562 kB of archives. 2021-05-17T18:02:35.5546103Z After this operation, 3615 kB of additional disk space will be used. 2021-05-17T18:02:35.5548545Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 jags amd64 4.3.0-3build1 [1562 kB] 2021-05-17T18:02:35.9636782Z Fetched 1562 kB in 0s (40.0 MB/s) 2021-05-17T18:02:35.9972654Z Selecting previously unselected package jags. 2021-05-17T18:02:36.0043332Z (Reading database ... 2021-05-17T18:02:36.0044368Z (Reading database ... 5% 2021-05-17T18:02:36.0045097Z (Reading database ... 10% 2021-05-17T18:02:36.0045782Z (Reading database ... 15% 2021-05-17T18:02:36.0046431Z (Reading database ... 20% 2021-05-17T18:02:36.0047096Z (Reading database ... 25% 2021-05-17T18:02:36.0047759Z (Reading database ... 30% 2021-05-17T18:02:36.0048401Z (Reading database ... 35% 2021-05-17T18:02:36.0049055Z (Reading database ... 40% 2021-05-17T18:02:36.0049717Z (Reading database ... 45% 2021-05-17T18:02:36.0050355Z (Reading database ... 50% 2021-05-17T18:02:36.0071397Z (Reading database ... 55% 2021-05-17T18:02:36.0109742Z (Reading database ... 60% 2021-05-17T18:02:36.0148717Z (Reading database ... 65% 2021-05-17T18:02:36.0276078Z (Reading database ... 70% 2021-05-17T18:02:36.0298059Z (Reading database ... 75% 2021-05-17T18:02:36.0657335Z (Reading database ... 80% 2021-05-17T18:02:36.0975690Z (Reading database ... 85% 2021-05-17T18:02:36.1122478Z (Reading database ... 90% 2021-05-17T18:02:36.1203700Z (Reading database ... 95% 2021-05-17T18:02:36.1204356Z (Reading database ... 100% 2021-05-17T18:02:36.1205211Z (Reading database ... 264783 files and directories currently installed.) 2021-05-17T18:02:36.1326841Z Preparing to unpack .../jags_4.3.0-3build1_amd64.deb ... 2021-05-17T18:02:36.1378106Z Unpacking jags (4.3.0-3build1) ... 2021-05-17T18:02:36.2911835Z Setting up jags (4.3.0-3build1) ... 2021-05-17T18:02:36.3124497Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:02:37.0193665Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:02:39.0686081Z Reading package lists... 2021-05-17T18:02:39.2405851Z Building dependency tree... 2021-05-17T18:02:39.2422964Z Reading state information... 2021-05-17T18:02:39.3896100Z The following additional packages will be installed: 2021-05-17T18:02:39.3898313Z libnode64 libuv1-dev 2021-05-17T18:02:39.4365840Z The following NEW packages will be installed: 2021-05-17T18:02:39.4369710Z libnode-dev libnode64 libuv1-dev 2021-05-17T18:02:39.4550107Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:39.4551177Z Need to get 6239 kB of archives. 2021-05-17T18:02:39.4552329Z After this operation, 24.9 MB of additional disk space will be used. 2021-05-17T18:02:39.4554509Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1-dev amd64 1.34.2-1ubuntu1.1 [103 kB] 2021-05-17T18:02:39.4613469Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode64 amd64 10.19.0~dfsg-3ubuntu1 [5765 kB] 2021-05-17T18:02:39.5142389Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnode-dev amd64 10.19.0~dfsg-3ubuntu1 [370 kB] 2021-05-17T18:02:39.8983592Z Fetched 6239 kB in 0s (82.3 MB/s) 2021-05-17T18:02:39.9297039Z Selecting previously unselected package libuv1-dev:amd64. 2021-05-17T18:02:39.9367853Z (Reading database ... 2021-05-17T18:02:39.9368687Z (Reading database ... 5% 2021-05-17T18:02:39.9369370Z (Reading database ... 10% 2021-05-17T18:02:39.9370045Z (Reading database ... 15% 2021-05-17T18:02:39.9370728Z (Reading database ... 20% 2021-05-17T18:02:39.9371386Z (Reading database ... 25% 2021-05-17T18:02:39.9372056Z (Reading database ... 30% 2021-05-17T18:02:39.9372696Z (Reading database ... 35% 2021-05-17T18:02:39.9373347Z (Reading database ... 40% 2021-05-17T18:02:39.9373995Z (Reading database ... 45% 2021-05-17T18:02:39.9374636Z (Reading database ... 50% 2021-05-17T18:02:39.9406378Z (Reading database ... 55% 2021-05-17T18:02:39.9443268Z (Reading database ... 60% 2021-05-17T18:02:39.9482600Z (Reading database ... 65% 2021-05-17T18:02:39.9611708Z (Reading database ... 70% 2021-05-17T18:02:39.9634568Z (Reading database ... 75% 2021-05-17T18:02:40.0008272Z (Reading database ... 80% 2021-05-17T18:02:40.0332399Z (Reading database ... 85% 2021-05-17T18:02:40.0480399Z (Reading database ... 90% 2021-05-17T18:02:40.0562868Z (Reading database ... 95% 2021-05-17T18:02:40.0563437Z (Reading database ... 100% 2021-05-17T18:02:40.0564191Z (Reading database ... 264923 files and directories currently installed.) 2021-05-17T18:02:40.0690203Z Preparing to unpack .../libuv1-dev_1.34.2-1ubuntu1.1_amd64.deb ... 2021-05-17T18:02:40.0721144Z Unpacking libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-17T18:02:40.1168349Z Selecting previously unselected package libnode64:amd64. 2021-05-17T18:02:40.1448811Z Preparing to unpack .../libnode64_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-17T18:02:40.1496007Z Unpacking libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-17T18:02:40.7221864Z Selecting previously unselected package libnode-dev:amd64. 2021-05-17T18:02:40.7488125Z Preparing to unpack .../libnode-dev_10.19.0~dfsg-3ubuntu1_amd64.deb ... 2021-05-17T18:02:40.7506105Z Unpacking libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-17T18:02:40.8480690Z Setting up libuv1-dev:amd64 (1.34.2-1ubuntu1.1) ... 2021-05-17T18:02:40.8557912Z Setting up libnode64:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-17T18:02:40.8653543Z Setting up libnode-dev:amd64 (10.19.0~dfsg-3ubuntu1) ... 2021-05-17T18:02:40.8760721Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:02:42.9287253Z Reading package lists... 2021-05-17T18:02:43.1028719Z Building dependency tree... 2021-05-17T18:02:43.1047577Z Reading state information... 2021-05-17T18:02:43.2617534Z The following additional packages will be installed: 2021-05-17T18:02:43.2621979Z libfftw3-bin libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-17T18:02:43.2629402Z Suggested packages: 2021-05-17T18:02:43.2630044Z libfftw3-doc 2021-05-17T18:02:43.3813603Z The following NEW packages will be installed: 2021-05-17T18:02:43.3823919Z libfftw3-bin libfftw3-dev libfftw3-long3 libfftw3-quad3 libfftw3-single3 2021-05-17T18:02:43.4023744Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:43.4024486Z Need to get 3986 kB of archives. 2021-05-17T18:02:43.4025213Z After this operation, 22.4 MB of additional disk space will be used. 2021-05-17T18:02:43.4027493Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] 2021-05-17T18:02:43.4097252Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] 2021-05-17T18:02:43.4162336Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] 2021-05-17T18:02:43.4230605Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] 2021-05-17T18:02:43.4234360Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] 2021-05-17T18:02:43.8303186Z Fetched 3986 kB in 0s (73.5 MB/s) 2021-05-17T18:02:43.8644315Z Selecting previously unselected package libfftw3-long3:amd64. 2021-05-17T18:02:43.8717866Z (Reading database ... 2021-05-17T18:02:43.8718786Z (Reading database ... 5% 2021-05-17T18:02:43.8719737Z (Reading database ... 10% 2021-05-17T18:02:43.8720274Z (Reading database ... 15% 2021-05-17T18:02:43.8720750Z (Reading database ... 20% 2021-05-17T18:02:43.8721288Z (Reading database ... 25% 2021-05-17T18:02:43.8721784Z (Reading database ... 30% 2021-05-17T18:02:43.8722271Z (Reading database ... 35% 2021-05-17T18:02:43.8722768Z (Reading database ... 40% 2021-05-17T18:02:43.8723232Z (Reading database ... 45% 2021-05-17T18:02:43.8723719Z (Reading database ... 50% 2021-05-17T18:02:43.8765109Z (Reading database ... 55% 2021-05-17T18:02:43.8805199Z (Reading database ... 60% 2021-05-17T18:02:43.8844214Z (Reading database ... 65% 2021-05-17T18:02:43.8970746Z (Reading database ... 70% 2021-05-17T18:02:43.8994111Z (Reading database ... 75% 2021-05-17T18:02:43.9368783Z (Reading database ... 80% 2021-05-17T18:02:43.9700536Z (Reading database ... 85% 2021-05-17T18:02:43.9857730Z (Reading database ... 90% 2021-05-17T18:02:43.9940747Z (Reading database ... 95% 2021-05-17T18:02:43.9941750Z (Reading database ... 100% 2021-05-17T18:02:43.9942765Z (Reading database ... 265059 files and directories currently installed.) 2021-05-17T18:02:44.0069720Z Preparing to unpack .../libfftw3-long3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-17T18:02:44.0133933Z Unpacking libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T18:02:44.0741201Z Selecting previously unselected package libfftw3-quad3:amd64. 2021-05-17T18:02:44.0984593Z Preparing to unpack .../libfftw3-quad3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-17T18:02:44.0996088Z Unpacking libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T18:02:44.1901628Z Selecting previously unselected package libfftw3-single3:amd64. 2021-05-17T18:02:44.2168184Z Preparing to unpack .../libfftw3-single3_3.3.8-2ubuntu1_amd64.deb ... 2021-05-17T18:02:44.2187624Z Unpacking libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T18:02:44.3230797Z Selecting previously unselected package libfftw3-bin. 2021-05-17T18:02:44.3505113Z Preparing to unpack .../libfftw3-bin_3.3.8-2ubuntu1_amd64.deb ... 2021-05-17T18:02:44.3517269Z Unpacking libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-17T18:02:44.3875990Z Selecting previously unselected package libfftw3-dev:amd64. 2021-05-17T18:02:44.4153803Z Preparing to unpack .../libfftw3-dev_3.3.8-2ubuntu1_amd64.deb ... 2021-05-17T18:02:44.4177425Z Unpacking libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T18:02:44.6902849Z Setting up libfftw3-single3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T18:02:44.6944609Z Setting up libfftw3-long3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T18:02:44.6984254Z Setting up libfftw3-quad3:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T18:02:44.7023867Z Setting up libfftw3-bin (3.3.8-2ubuntu1) ... 2021-05-17T18:02:44.7054082Z Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... 2021-05-17T18:02:44.7114629Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:02:45.4652292Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:02:47.4854682Z Reading package lists... 2021-05-17T18:02:47.6595417Z Building dependency tree... 2021-05-17T18:02:47.6613453Z Reading state information... 2021-05-17T18:02:47.8131006Z The following additional packages will be installed: 2021-05-17T18:02:47.8134607Z libdcmtk14 2021-05-17T18:02:47.8583173Z The following NEW packages will be installed: 2021-05-17T18:02:47.8591629Z dcmtk libdcmtk14 2021-05-17T18:02:47.8811806Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:47.8813198Z Need to get 5546 kB of archives. 2021-05-17T18:02:47.8814361Z After this operation, 26.5 MB of additional disk space will be used. 2021-05-17T18:02:47.8816212Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] 2021-05-17T18:02:48.0219227Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 dcmtk amd64 3.6.4-2.1build2 [864 kB] 2021-05-17T18:02:48.4339007Z Fetched 5546 kB in 0s (30.2 MB/s) 2021-05-17T18:02:48.4677909Z Selecting previously unselected package libdcmtk14. 2021-05-17T18:02:48.4747764Z (Reading database ... 2021-05-17T18:02:48.4748713Z (Reading database ... 5% 2021-05-17T18:02:48.4749403Z (Reading database ... 10% 2021-05-17T18:02:48.4750083Z (Reading database ... 15% 2021-05-17T18:02:48.4750746Z (Reading database ... 20% 2021-05-17T18:02:48.4751407Z (Reading database ... 25% 2021-05-17T18:02:48.4752109Z (Reading database ... 30% 2021-05-17T18:02:48.4752775Z (Reading database ... 35% 2021-05-17T18:02:48.4753416Z (Reading database ... 40% 2021-05-17T18:02:48.4754070Z (Reading database ... 45% 2021-05-17T18:02:48.4754719Z (Reading database ... 50% 2021-05-17T18:02:48.4786412Z (Reading database ... 55% 2021-05-17T18:02:49.4141679Z (Reading database ... 60% 2021-05-17T18:02:49.4143191Z (Reading database ... 65% 2021-05-17T18:02:49.4145866Z (Reading database ... 70% 2021-05-17T18:02:49.4146619Z (Reading database ... 75% 2021-05-17T18:02:49.4147146Z (Reading database ... 80% 2021-05-17T18:02:49.4147638Z (Reading database ... 85% 2021-05-17T18:02:49.4148128Z (Reading database ... 90% 2021-05-17T18:02:49.4148600Z (Reading database ... 95% 2021-05-17T18:02:49.4149089Z (Reading database ... 100% 2021-05-17T18:02:49.4149829Z (Reading database ... 265150 files and directories currently installed.) 2021-05-17T18:02:49.4151755Z Preparing to unpack .../libdcmtk14_3.6.4-2.1build2_amd64.deb ... 2021-05-17T18:02:49.4152639Z Unpacking libdcmtk14 (3.6.4-2.1build2) ... 2021-05-17T18:02:49.4153348Z Selecting previously unselected package dcmtk. 2021-05-17T18:02:49.4154271Z Preparing to unpack .../dcmtk_3.6.4-2.1build2_amd64.deb ... 2021-05-17T18:02:49.4155077Z Unpacking dcmtk (3.6.4-2.1build2) ... 2021-05-17T18:02:49.4155792Z Setting up libdcmtk14 (3.6.4-2.1build2) ... 2021-05-17T18:02:49.4156500Z Setting up dcmtk (3.6.4-2.1build2) ... 2021-05-17T18:02:49.4157320Z Adding `dcmtk' group to system ... 2021-05-17T18:02:49.4157985Z Adding `dcmtk' user to system ... 2021-05-17T18:02:49.4406271Z adduser: Warning: The home directory `/var/lib/dcmtk/db' does not belong to the user you are currently creating. 2021-05-17T18:02:49.6876564Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:02:51.2208490Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:02:53.3380005Z Reading package lists... 2021-05-17T18:02:53.5076936Z Building dependency tree... 2021-05-17T18:02:53.5093979Z Reading state information... 2021-05-17T18:02:53.7311161Z libsecret-1-dev is already the newest version (0.20.3-0ubuntu1). 2021-05-17T18:02:53.7312580Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:53.7919137Z Reading package lists... 2021-05-17T18:02:53.9584990Z Building dependency tree... 2021-05-17T18:02:53.9602241Z Reading state information... 2021-05-17T18:02:54.1958712Z libpng-dev is already the newest version (1.6.37-2). 2021-05-17T18:02:54.1960476Z libpng-dev set to manually installed. 2021-05-17T18:02:54.1961401Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:54.2564644Z Reading package lists... 2021-05-17T18:02:54.4180097Z Building dependency tree... 2021-05-17T18:02:54.4197871Z Reading state information... 2021-05-17T18:02:54.5674373Z The following additional packages will be installed: 2021-05-17T18:02:54.5676800Z libopenjp2-7 libpoppler-cpp0v5 libpoppler-dev libpoppler97 poppler-data 2021-05-17T18:02:54.5680203Z Suggested packages: 2021-05-17T18:02:54.5681657Z poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho 2021-05-17T18:02:54.5683606Z fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai 2021-05-17T18:02:54.5684890Z fonts-arphic-uming fonts-nanum 2021-05-17T18:02:54.6139225Z The following NEW packages will be installed: 2021-05-17T18:02:54.6141321Z libopenjp2-7 libpoppler-cpp-dev libpoppler-cpp0v5 libpoppler-dev 2021-05-17T18:02:54.6145733Z libpoppler97 poppler-data 2021-05-17T18:02:54.6327926Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:54.6328641Z Need to get 2582 kB of archives. 2021-05-17T18:02:54.6329608Z After this operation, 16.7 MB of additional disk space will be used. 2021-05-17T18:02:54.6333299Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1475 kB] 2021-05-17T18:02:54.6595243Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB] 2021-05-17T18:02:54.6617685Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB] 2021-05-17T18:02:54.6738112Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp0v5 amd64 0.86.1-0ubuntu1 [35.6 kB] 2021-05-17T18:02:54.6744109Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5336 B] 2021-05-17T18:02:54.6748296Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-cpp-dev amd64 0.86.1-0ubuntu1 [10.4 kB] 2021-05-17T18:02:55.0626878Z Fetched 2582 kB in 0s (46.0 MB/s) 2021-05-17T18:02:55.0941414Z Selecting previously unselected package poppler-data. 2021-05-17T18:02:55.1011336Z (Reading database ... 2021-05-17T18:02:55.1012074Z (Reading database ... 5% 2021-05-17T18:02:55.1012738Z (Reading database ... 10% 2021-05-17T18:02:55.1013433Z (Reading database ... 15% 2021-05-17T18:02:55.1014076Z (Reading database ... 20% 2021-05-17T18:02:55.1014904Z (Reading database ... 25% 2021-05-17T18:02:55.1015577Z (Reading database ... 30% 2021-05-17T18:02:55.1016231Z (Reading database ... 35% 2021-05-17T18:02:55.1016881Z (Reading database ... 40% 2021-05-17T18:02:55.1017531Z (Reading database ... 45% 2021-05-17T18:02:55.1018174Z (Reading database ... 50% 2021-05-17T18:02:55.1048875Z (Reading database ... 55% 2021-05-17T18:02:55.1083364Z (Reading database ... 60% 2021-05-17T18:02:55.1119583Z (Reading database ... 65% 2021-05-17T18:02:55.1241842Z (Reading database ... 70% 2021-05-17T18:02:55.1264344Z (Reading database ... 75% 2021-05-17T18:02:55.1622926Z (Reading database ... 80% 2021-05-17T18:02:55.1940097Z (Reading database ... 85% 2021-05-17T18:02:55.2094276Z (Reading database ... 90% 2021-05-17T18:02:55.2173092Z (Reading database ... 95% 2021-05-17T18:02:55.2176195Z (Reading database ... 100% 2021-05-17T18:02:55.2177062Z (Reading database ... 265385 files and directories currently installed.) 2021-05-17T18:02:55.2300361Z Preparing to unpack .../0-poppler-data_0.4.9-2_all.deb ... 2021-05-17T18:02:55.2327647Z Unpacking poppler-data (0.4.9-2) ... 2021-05-17T18:02:55.4660950Z Selecting previously unselected package libopenjp2-7:amd64. 2021-05-17T18:02:55.4892182Z Preparing to unpack .../1-libopenjp2-7_2.3.1-1ubuntu4.20.04.1_amd64.deb ... 2021-05-17T18:02:55.4930908Z Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-17T18:02:55.5381721Z Selecting previously unselected package libpoppler97:amd64. 2021-05-17T18:02:55.5620319Z Preparing to unpack .../2-libpoppler97_0.86.1-0ubuntu1_amd64.deb ... 2021-05-17T18:02:55.5628748Z Unpacking libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T18:02:55.6821541Z Selecting previously unselected package libpoppler-cpp0v5:amd64. 2021-05-17T18:02:55.7047956Z Preparing to unpack .../3-libpoppler-cpp0v5_0.86.1-0ubuntu1_amd64.deb ... 2021-05-17T18:02:55.7071091Z Unpacking libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T18:02:55.7422213Z Selecting previously unselected package libpoppler-dev:amd64. 2021-05-17T18:02:55.7662354Z Preparing to unpack .../4-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-17T18:02:55.7671301Z Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T18:02:55.7980710Z Selecting previously unselected package libpoppler-cpp-dev:amd64. 2021-05-17T18:02:55.8202308Z Preparing to unpack .../5-libpoppler-cpp-dev_0.86.1-0ubuntu1_amd64.deb ... 2021-05-17T18:02:55.8215184Z Unpacking libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T18:02:55.8805952Z Setting up poppler-data (0.4.9-2) ... 2021-05-17T18:02:55.8966995Z Setting up libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ... 2021-05-17T18:02:55.8997504Z Setting up libpoppler97:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T18:02:55.9027890Z Setting up libpoppler-cpp0v5:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T18:02:55.9079612Z Setting up libpoppler-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T18:02:55.9126931Z Setting up libpoppler-cpp-dev:amd64 (0.86.1-0ubuntu1) ... 2021-05-17T18:02:55.9190205Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-17T18:02:56.0063446Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:02:57.9988920Z Reading package lists... 2021-05-17T18:02:58.1621461Z Building dependency tree... 2021-05-17T18:02:58.1639112Z Reading state information... 2021-05-17T18:02:58.3103470Z The following additional packages will be installed: 2021-05-17T18:02:58.3105761Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libsz2 2021-05-17T18:02:58.3110344Z Suggested packages: 2021-05-17T18:02:58.3111263Z libhdf5-doc 2021-05-17T18:02:58.3565976Z The following NEW packages will be installed: 2021-05-17T18:02:58.3569353Z hdf5-helpers libaec-dev libaec0 libhdf5-103 libhdf5-cpp-103 libhdf5-dev 2021-05-17T18:02:58.3571657Z libsz2 2021-05-17T18:02:58.3738953Z 0 upgraded, 7 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:02:58.3739706Z Need to get 4074 kB of archives. 2021-05-17T18:02:58.3740432Z After this operation, 17.6 MB of additional disk space will be used. 2021-05-17T18:02:58.3742576Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB] 2021-05-17T18:02:58.3756662Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB] 2021-05-17T18:02:58.3764001Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5188 B] 2021-05-17T18:02:58.3768728Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1311 kB] 2021-05-17T18:02:58.3925011Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB] 2021-05-17T18:02:58.3935496Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB] 2021-05-17T18:02:58.3940245Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2589 kB] 2021-05-17T18:02:58.8092627Z Fetched 4074 kB in 0s (79.0 MB/s) 2021-05-17T18:02:58.8420931Z Selecting previously unselected package hdf5-helpers. 2021-05-17T18:02:58.8449590Z (Reading database ... 2021-05-17T18:02:58.8450458Z (Reading database ... 5% 2021-05-17T18:02:58.8451096Z (Reading database ... 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2021-05-17T18:02:58.9626599Z (Reading database ... 265945 files and directories currently installed.) 2021-05-17T18:02:58.9749801Z Preparing to unpack .../0-hdf5-helpers_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-17T18:02:58.9759711Z Unpacking hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-17T18:02:58.9982983Z Selecting previously unselected package libaec0:amd64. 2021-05-17T18:02:59.0269899Z Preparing to unpack .../1-libaec0_1.0.4-1_amd64.deb ... 2021-05-17T18:02:59.0295295Z Unpacking libaec0:amd64 (1.0.4-1) ... 2021-05-17T18:02:59.0579809Z Selecting previously unselected package libsz2:amd64. 2021-05-17T18:02:59.0805625Z Preparing to unpack .../2-libsz2_1.0.4-1_amd64.deb ... 2021-05-17T18:02:59.0813910Z Unpacking libsz2:amd64 (1.0.4-1) ... 2021-05-17T18:02:59.1062183Z Selecting previously unselected package libhdf5-103:amd64. 2021-05-17T18:02:59.1339084Z Preparing to unpack .../3-libhdf5-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-17T18:02:59.1348485Z Unpacking libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-17T18:02:59.2741987Z Selecting previously unselected package libhdf5-cpp-103:amd64. 2021-05-17T18:02:59.2990924Z Preparing to unpack .../4-libhdf5-cpp-103_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-17T18:02:59.3004939Z Unpacking libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-17T18:02:59.3380813Z Selecting previously unselected package libaec-dev:amd64. 2021-05-17T18:02:59.3595678Z Preparing to unpack .../5-libaec-dev_1.0.4-1_amd64.deb ... 2021-05-17T18:02:59.3603000Z Unpacking libaec-dev:amd64 (1.0.4-1) ... 2021-05-17T18:02:59.3860811Z Selecting previously unselected package libhdf5-dev. 2021-05-17T18:02:59.4102540Z Preparing to unpack .../6-libhdf5-dev_1.10.4+repack-11ubuntu1_amd64.deb ... 2021-05-17T18:02:59.4109936Z Unpacking libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-17T18:02:59.7024396Z Setting up hdf5-helpers (1.10.4+repack-11ubuntu1) ... 2021-05-17T18:02:59.7048726Z Setting up libaec0:amd64 (1.0.4-1) ... 2021-05-17T18:02:59.7070398Z Setting up libsz2:amd64 (1.0.4-1) ... 2021-05-17T18:02:59.7092496Z Setting up libaec-dev:amd64 (1.0.4-1) ... 2021-05-17T18:02:59.7110814Z Setting up libhdf5-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-17T18:02:59.7129879Z Setting up libhdf5-cpp-103:amd64 (1.10.4+repack-11ubuntu1) ... 2021-05-17T18:02:59.7150127Z Setting up libhdf5-dev (1.10.4+repack-11ubuntu1) ... 2021-05-17T18:02:59.7217597Z update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 2021-05-17T18:02:59.7245064Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:03:00.4388663Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:03:02.4686974Z Reading package lists... 2021-05-17T18:03:02.6381685Z Building dependency tree... 2021-05-17T18:03:02.6398891Z Reading state information... 2021-05-17T18:03:02.7953444Z The following additional packages will be installed: 2021-05-17T18:03:02.7957047Z libdrm-dev libgl-dev libglu1-mesa libglx-dev 2021-05-17T18:03:02.8427369Z The following NEW packages will be installed: 2021-05-17T18:03:02.8434583Z libdrm-dev libgl-dev libglu1-mesa libglu1-mesa-dev libglx-dev 2021-05-17T18:03:02.8439678Z mesa-common-dev 2021-05-17T18:03:02.8640470Z 0 upgraded, 6 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:02.8641245Z Need to get 1761 kB of archives. 2021-05-17T18:03:02.8641962Z After this operation, 5442 kB of additional disk space will be used. 2021-05-17T18:03:02.8643805Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libdrm-dev amd64 2.4.102-1ubuntu1~20.04.1 [126 kB] 2021-05-17T18:03:02.8701683Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libglx-dev amd64 1.3.2-1~ubuntu0.20.04.1 [14.0 kB] 2021-05-17T18:03:02.8755429Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgl-dev amd64 1.3.2-1~ubuntu0.20.04.1 [97.8 kB] 2021-05-17T18:03:02.8774538Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa amd64 9.0.1-1build1 [168 kB] 2021-05-17T18:03:02.8820747Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libglu1-mesa-dev amd64 9.0.1-1build1 [207 kB] 2021-05-17T18:03:02.8884236Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-common-dev amd64 20.2.6-0ubuntu0.20.04.1 [1148 kB] 2021-05-17T18:03:03.2881819Z Fetched 1761 kB in 0s (33.5 MB/s) 2021-05-17T18:03:03.3182008Z Selecting previously unselected package libdrm-dev:amd64. 2021-05-17T18:03:03.3234347Z (Reading database ... 2021-05-17T18:03:03.3235366Z (Reading database ... 5% 2021-05-17T18:03:03.3236058Z (Reading database ... 10% 2021-05-17T18:03:03.3236735Z (Reading database ... 15% 2021-05-17T18:03:03.3237406Z (Reading database ... 20% 2021-05-17T18:03:03.3238068Z (Reading database ... 25% 2021-05-17T18:03:03.3238761Z (Reading database ... 30% 2021-05-17T18:03:03.3239439Z (Reading 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(2.4.102-1ubuntu1~20.04.1) ... 2021-05-17T18:03:03.5061333Z Selecting previously unselected package libglx-dev:amd64. 2021-05-17T18:03:03.5251533Z Preparing to unpack .../1-libglx-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-17T18:03:03.5267726Z Unpacking libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-17T18:03:03.5701192Z Selecting previously unselected package libgl-dev:amd64. 2021-05-17T18:03:03.5911185Z Preparing to unpack .../2-libgl-dev_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-17T18:03:03.5927308Z Unpacking libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-17T18:03:03.6382157Z Selecting previously unselected package libglu1-mesa:amd64. 2021-05-17T18:03:03.6617318Z Preparing to unpack .../3-libglu1-mesa_9.0.1-1build1_amd64.deb ... 2021-05-17T18:03:03.6647128Z Unpacking libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-17T18:03:03.7061240Z Selecting previously unselected package libglu1-mesa-dev:amd64. 2021-05-17T18:03:03.7317302Z Preparing to unpack .../4-libglu1-mesa-dev_9.0.1-1build1_amd64.deb ... 2021-05-17T18:03:03.7347245Z Unpacking libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-17T18:03:03.7820563Z Selecting previously unselected package mesa-common-dev:amd64. 2021-05-17T18:03:03.8057542Z Preparing to unpack .../5-mesa-common-dev_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-17T18:03:03.8069731Z Unpacking mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-17T18:03:03.9678485Z Setting up libdrm-dev:amd64 (2.4.102-1ubuntu1~20.04.1) ... 2021-05-17T18:03:03.9761771Z Setting up libglx-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-17T18:03:03.9808516Z Setting up libglu1-mesa:amd64 (9.0.1-1build1) ... 2021-05-17T18:03:03.9867551Z Setting up libgl-dev:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-17T18:03:03.9932643Z Setting up libglu1-mesa-dev:amd64 (9.0.1-1build1) ... 2021-05-17T18:03:04.0019871Z Setting up mesa-common-dev:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-17T18:03:04.0072718Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:03:05.3658505Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:03:07.3726373Z Reading package lists... 2021-05-17T18:03:07.9194353Z Building dependency tree... 2021-05-17T18:03:07.9195858Z Reading state information... 2021-05-17T18:03:07.9196913Z The following additional packages will be installed: 2021-05-17T18:03:07.9198548Z libprotobuf-lite17 libprotoc17 2021-05-17T18:03:07.9199589Z The following NEW packages will be installed: 2021-05-17T18:03:07.9201033Z libprotobuf-dev libprotobuf-lite17 libprotoc-dev libprotoc17 2021-05-17T18:03:07.9202283Z protobuf-compiler 2021-05-17T18:03:07.9203321Z 0 upgraded, 5 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:07.9204258Z Need to get 2754 kB of archives. 2021-05-17T18:03:07.9205285Z After this operation, 19.9 MB of additional disk space will be used. 2021-05-17T18:03:07.9207175Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-lite17 amd64 3.6.1.3-2ubuntu5 [132 kB] 2021-05-17T18:03:07.9210165Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc17 amd64 3.6.1.3-2ubuntu5 [646 kB] 2021-05-17T18:03:07.9212316Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotobuf-dev amd64 3.6.1.3-2ubuntu5 [1155 kB] 2021-05-17T18:03:07.9214376Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libprotoc-dev amd64 3.6.1.3-2ubuntu5 [793 kB] 2021-05-17T18:03:07.9216512Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 protobuf-compiler amd64 3.6.1.3-2ubuntu5 [27.6 kB] 2021-05-17T18:03:08.1958310Z Fetched 2754 kB in 0s (41.3 MB/s) 2021-05-17T18:03:08.2264713Z Selecting previously unselected package libprotobuf-lite17:amd64. 2021-05-17T18:03:08.2337421Z (Reading database ... 2021-05-17T18:03:08.2338159Z (Reading database ... 5% 2021-05-17T18:03:08.2340790Z (Reading database ... 10% 2021-05-17T18:03:08.2341422Z (Reading database ... 15% 2021-05-17T18:03:08.2341988Z (Reading 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2021-05-17T18:03:08.3645293Z Preparing to unpack .../libprotobuf-lite17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-17T18:03:08.3673335Z Unpacking libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T18:03:08.4140673Z Selecting previously unselected package libprotoc17:amd64. 2021-05-17T18:03:08.4348646Z Preparing to unpack .../libprotoc17_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-17T18:03:08.4369024Z Unpacking libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T18:03:08.5212066Z Selecting previously unselected package libprotobuf-dev:amd64. 2021-05-17T18:03:08.5487707Z Preparing to unpack .../libprotobuf-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-17T18:03:08.5506798Z Unpacking libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T18:03:08.7101083Z Selecting previously unselected package libprotoc-dev:amd64. 2021-05-17T18:03:08.7308970Z Preparing to unpack .../libprotoc-dev_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-17T18:03:08.7320381Z Unpacking libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T18:03:08.8460779Z Selecting previously unselected package protobuf-compiler. 2021-05-17T18:03:08.8691738Z Preparing to unpack .../protobuf-compiler_3.6.1.3-2ubuntu5_amd64.deb ... 2021-05-17T18:03:08.8708304Z Unpacking protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-17T18:03:08.9300837Z Setting up libprotoc17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T18:03:08.9341262Z Setting up protobuf-compiler (3.6.1.3-2ubuntu5) ... 2021-05-17T18:03:08.9369928Z Setting up libprotobuf-lite17:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T18:03:08.9407926Z Setting up libprotobuf-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T18:03:08.9436601Z Setting up libprotoc-dev:amd64 (3.6.1.3-2ubuntu5) ... 2021-05-17T18:03:08.9473481Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:03:09.6404000Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:03:11.6972655Z Reading package lists... 2021-05-17T18:03:11.8733514Z Building dependency tree... 2021-05-17T18:03:11.8754070Z Reading state information... 2021-05-17T18:03:12.0371244Z The following additional packages will be installed: 2021-05-17T18:03:12.0373807Z i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 libasyncns0 2021-05-17T18:03:12.0375571Z libavc1394-0 libavcodec58 libavdevice58 libavfilter7 libavformat58 2021-05-17T18:03:12.0377025Z libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 libcaca0 2021-05-17T18:03:12.0383921Z libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 libcodec2-0.9 2021-05-17T18:03:12.0385449Z libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 libigdgmm11 2021-05-17T18:03:12.0386754Z libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-17T18:03:12.0388130Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-17T18:03:12.0389543Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-17T18:03:12.0390872Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-17T18:03:12.0392231Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-17T18:03:12.0394008Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-17T18:03:12.0395325Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-17T18:03:12.0396601Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-17T18:03:12.0397833Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-17T18:03:12.0398623Z Suggested packages: 2021-05-17T18:03:12.0399753Z ffmpeg-doc i965-va-driver-shaders libbluray-bdj jackd2 libportaudio2 2021-05-17T18:03:12.0401110Z opus-tools pulseaudio libraw1394-doc serdi sndiod sordi speex opencl-icd 2021-05-17T18:03:12.0402624Z libvdpau-va-gl1 nvidia-vdpau-driver nvidia-legacy-340xx-vdpau-driver 2021-05-17T18:03:12.0403985Z nvidia-legacy-304xx-vdpau-driver 2021-05-17T18:03:12.1104913Z The following NEW packages will be installed: 2021-05-17T18:03:12.1108327Z ffmpeg i965-va-driver intel-media-va-driver libaacs0 libaom0 libass9 2021-05-17T18:03:12.1110024Z libasyncns0 libavc1394-0 libavcodec58 libavdevice58 libavfilter7 2021-05-17T18:03:12.1111493Z libavformat58 libavresample4 libavutil56 libbdplus0 libbluray2 libbs2b0 2021-05-17T18:03:12.1113146Z libcaca0 libcdio-cdda2 libcdio-paranoia2 libcdio18 libchromaprint1 2021-05-17T18:03:12.1114838Z libcodec2-0.9 libdc1394-22 libflac8 libflite1 libgme0 libgsm1 libiec61883-0 2021-05-17T18:03:12.1117320Z libigdgmm11 libjack-jackd2-0 liblilv-0-0 libmp3lame0 libmpg123-0 libmysofa1 2021-05-17T18:03:12.1119398Z libopenal-data libopenal1 libopenmpt0 libopus0 libpostproc55 libpulse0 2021-05-17T18:03:12.1121399Z libraw1394-11 librubberband2 libsamplerate0 libsdl2-2.0-0 libserd-0-0 2021-05-17T18:03:12.1123069Z libshine3 libsnappy1v5 libsndfile1 libsndio7.0 libsord-0-0 libsoxr0 2021-05-17T18:03:12.1124445Z libspeex1 libsratom-0-0 libssh-gcrypt-4 libswresample3 libswscale5 2021-05-17T18:03:12.1126138Z libtheora0 libtwolame0 libva-drm2 libva-x11-2 libva2 libvdpau1 libvidstab1.1 2021-05-17T18:03:12.1127445Z libvorbisenc2 libwavpack1 libx264-155 libx265-179 libxvidcore4 2021-05-17T18:03:12.1128823Z libzvbi-common libzvbi0 mesa-va-drivers mesa-vdpau-drivers 2021-05-17T18:03:12.1130755Z ocl-icd-libopencl1 va-driver-all vdpau-driver-all 2021-05-17T18:03:12.1335560Z 0 upgraded, 76 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:12.1336825Z Need to get 47.1 MB of archives. 2021-05-17T18:03:12.1338846Z After this operation, 195 MB of additional disk space will be used. 2021-05-17T18:03:12.1340828Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaom0 amd64 1.0.0.errata1-3build1 [1160 kB] 2021-05-17T18:03:12.1580515Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva2 amd64 2.7.0-2 [53.5 kB] 2021-05-17T18:03:12.1593490Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-drm2 amd64 2.7.0-2 [7044 B] 2021-05-17T18:03:12.1601286Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libva-x11-2 amd64 2.7.0-2 [11.9 kB] 2021-05-17T18:03:12.1608497Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvdpau1 amd64 1.3-1ubuntu2 [25.6 kB] 2021-05-17T18:03:12.1617027Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 ocl-icd-libopencl1 amd64 2.2.11-1ubuntu1 [30.3 kB] 2021-05-17T18:03:12.1626994Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavutil56 amd64 7:4.2.4-1ubuntu0.1 [241 kB] 2021-05-17T18:03:12.1674879Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcodec2-0.9 amd64 0.9.2-2 [7886 kB] 2021-05-17T18:03:12.3448328Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgsm1 amd64 1.0.18-2 [24.4 kB] 2021-05-17T18:03:12.3462260Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmp3lame0 amd64 3.100-3 [133 kB] 2021-05-17T18:03:12.3479171Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libopus0 amd64 1.3.1-0ubuntu1 [191 kB] 2021-05-17T18:03:12.3500237Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libshine3 amd64 3.1.1-2 [23.2 kB] 2021-05-17T18:03:12.3507462Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsnappy1v5 amd64 1.1.8-1build1 [16.7 kB] 2021-05-17T18:03:12.3515962Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libspeex1 amd64 1.2~rc1.2-1.1ubuntu1 [53.2 kB] 2021-05-17T18:03:12.3524960Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsoxr0 amd64 0.1.3-2build1 [78.0 kB] 2021-05-17T18:03:12.3537229Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswresample3 amd64 7:4.2.4-1ubuntu0.1 [57.1 kB] 2021-05-17T18:03:12.3549388Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtheora0 amd64 1.1.1+dfsg.1-15ubuntu2 [162 kB] 2021-05-17T18:03:12.3568456Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libtwolame0 amd64 0.4.0-2 [47.6 kB] 2021-05-17T18:03:12.3578806Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvorbisenc2 amd64 1.3.6-2ubuntu1 [70.7 kB] 2021-05-17T18:03:12.3591287Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwavpack1 amd64 5.2.0-1ubuntu0.1 [77.3 kB] 2021-05-17T18:03:12.3602306Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx264-155 amd64 2:0.155.2917+git0a84d98-2 [521 kB] 2021-05-17T18:03:12.3647277Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libx265-179 amd64 3.2.1-1build1 [1060 kB] 2021-05-17T18:03:12.3737347Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxvidcore4 amd64 2:1.3.7-1 [201 kB] 2021-05-17T18:03:12.3754289Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi-common all 0.2.35-17 [32.5 kB] 2021-05-17T18:03:12.3761220Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzvbi0 amd64 0.2.35-17 [237 kB] 2021-05-17T18:03:12.3781035Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavcodec58 amd64 7:4.2.4-1ubuntu0.1 [4876 kB] 2021-05-17T18:03:12.5139127Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libraw1394-11 amd64 2.1.2-1 [30.7 kB] 2021-05-17T18:03:12.5145178Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavc1394-0 amd64 0.5.4-5 [16.2 kB] 2021-05-17T18:03:12.5161715Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libass9 amd64 1:0.14.0-2 [88.0 kB] 2021-05-17T18:03:12.5185865Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbluray2 amd64 1:1.2.0-1 [138 kB] 2021-05-17T18:03:12.5224097Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libchromaprint1 amd64 1.4.3-3build1 [37.6 kB] 2021-05-17T18:03:12.5236720Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgme0 amd64 0.6.2-1build1 [123 kB] 2021-05-17T18:03:12.5293475Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmpg123-0 amd64 1.25.13-1 [124 kB] 2021-05-17T18:03:12.5319444Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenmpt0 amd64 0.4.11-1build1 [599 kB] 2021-05-17T18:03:12.5480976Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libssh-gcrypt-4 amd64 0.9.3-2ubuntu2.1 [201 kB] 2021-05-17T18:03:12.5533158Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavformat58 amd64 7:4.2.4-1ubuntu0.1 [981 kB] 2021-05-17T18:03:12.5779159Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbs2b0 amd64 3.1.0+dfsg-2.2build1 [10.2 kB] 2021-05-17T18:03:12.5790750Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libflite1 amd64 2.1-release-3 [12.8 MB] 2021-05-17T18:03:12.6875602Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libserd-0-0 amd64 0.30.2-1 [46.6 kB] 2021-05-17T18:03:12.6885762Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsord-0-0 amd64 0.16.4-1 [19.5 kB] 2021-05-17T18:03:12.6891219Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsratom-0-0 amd64 0.6.4-1 [16.9 kB] 2021-05-17T18:03:12.6897218Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 liblilv-0-0 amd64 0.24.6-1ubuntu0.1 [40.6 kB] 2021-05-17T18:03:12.6908282Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmysofa1 amd64 1.0~dfsg0-1 [39.2 kB] 2021-05-17T18:03:12.6916378Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libpostproc55 amd64 7:4.2.4-1ubuntu0.1 [55.3 kB] 2021-05-17T18:03:12.6923053Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsamplerate0 amd64 0.1.9-2 [939 kB] 2021-05-17T18:03:12.7015328Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 librubberband2 amd64 1.8.2-1build1 [89.4 kB] 2021-05-17T18:03:12.7025966Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libswscale5 amd64 7:4.2.4-1ubuntu0.1 [156 kB] 2021-05-17T18:03:12.7045049Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libvidstab1.1 amd64 1.1.0-2 [35.0 kB] 2021-05-17T18:03:12.7052725Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavfilter7 amd64 7:4.2.4-1ubuntu0.1 [1084 kB] 2021-05-17T18:03:12.7159971Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcaca0 amd64 0.99.beta19-2.1ubuntu1.20.04.1 [202 kB] 2021-05-17T18:03:12.7182414Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio18 amd64 2.0.0-2 [58.6 kB] 2021-05-17T18:03:12.7191390Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-cdda2 amd64 10.2+2.0.0-1 [17.6 kB] 2021-05-17T18:03:12.7197651Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdio-paranoia2 amd64 10.2+2.0.0-1 [16.2 kB] 2021-05-17T18:03:12.7203351Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdc1394-22 amd64 2.2.5-2.1 [79.6 kB] 2021-05-17T18:03:12.7212431Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libiec61883-0 amd64 1.2.0-3 [24.3 kB] 2021-05-17T18:03:12.7218777Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjack-jackd2-0 amd64 1.9.12~dfsg-2ubuntu2 [267 kB] 2021-05-17T18:03:12.7243077Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal-data all 1:1.19.1-1 [162 kB] 2021-05-17T18:03:12.7260038Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsndio7.0 amd64 1.5.0-3 [24.5 kB] 2021-05-17T18:03:12.7266315Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libopenal1 amd64 1:1.19.1-1 [492 kB] 2021-05-17T18:03:12.7309146Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libasyncns0 amd64 0.8-6 [12.1 kB] 2021-05-17T18:03:12.7315426Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libflac8 amd64 1.3.3-1build1 [103 kB] 2021-05-17T18:03:12.7326506Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsndfile1 amd64 1.0.28-7 [170 kB] 2021-05-17T18:03:12.7344450Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libpulse0 amd64 1:13.99.1-1ubuntu3.10 [262 kB] 2021-05-17T18:03:12.7374843Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsdl2-2.0-0 amd64 2.0.10+dfsg1-3 [407 kB] 2021-05-17T18:03:12.7410889Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavdevice58 amd64 7:4.2.4-1ubuntu0.1 [74.3 kB] 2021-05-17T18:03:12.7421969Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libavresample4 amd64 7:4.2.4-1ubuntu0.1 [54.2 kB] 2021-05-17T18:03:12.7428473Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 ffmpeg amd64 7:4.2.4-1ubuntu0.1 [1453 kB] 2021-05-17T18:03:12.7579684Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libigdgmm11 amd64 20.1.1+ds1-1 [111 kB] 2021-05-17T18:03:12.7589509Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 intel-media-va-driver amd64 20.1.1+dfsg1-1 [1764 kB] 2021-05-17T18:03:12.7738196Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libaacs0 amd64 0.9.0-2 [50.1 kB] 2021-05-17T18:03:12.7740444Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbdplus0 amd64 0.1.2-3 [47.3 kB] 2021-05-17T18:03:12.7745999Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 mesa-va-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2618 kB] 2021-05-17T18:03:12.8014687Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 mesa-vdpau-drivers amd64 20.2.6-0ubuntu0.20.04.1 [2744 kB] 2021-05-17T18:03:12.8290100Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 i965-va-driver amd64 2.4.0-0ubuntu1 [924 kB] 2021-05-17T18:03:12.8360958Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 va-driver-all amd64 2.7.0-2 [4020 B] 2021-05-17T18:03:12.8379513Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 vdpau-driver-all amd64 1.3-1ubuntu2 [4596 B] 2021-05-17T18:03:13.3904736Z Fetched 47.1 MB in 1s (65.7 MB/s) 2021-05-17T18:03:13.4231805Z Selecting previously unselected package libaom0:amd64. 2021-05-17T18:03:13.4307697Z (Reading database ... 2021-05-17T18:03:13.4308691Z (Reading database ... 5% 2021-05-17T18:03:13.4309303Z (Reading database ... 10% 2021-05-17T18:03:13.4309804Z (Reading database ... 15% 2021-05-17T18:03:13.4310320Z (Reading database ... 20% 2021-05-17T18:03:13.4310812Z (Reading database ... 25% 2021-05-17T18:03:13.4311300Z (Reading database ... 30% 2021-05-17T18:03:13.4311798Z (Reading database ... 35% 2021-05-17T18:03:13.4312285Z (Reading database ... 40% 2021-05-17T18:03:13.4312759Z (Reading database ... 45% 2021-05-17T18:03:13.4313245Z (Reading database ... 50% 2021-05-17T18:03:13.4356827Z (Reading database ... 55% 2021-05-17T18:03:13.4393762Z (Reading database ... 60% 2021-05-17T18:03:13.4434671Z (Reading database ... 65% 2021-05-17T18:03:13.4572641Z (Reading database ... 70% 2021-05-17T18:03:13.4697772Z (Reading database ... 75% 2021-05-17T18:03:13.4987268Z (Reading database ... 80% 2021-05-17T18:03:13.5333991Z (Reading database ... 85% 2021-05-17T18:03:13.5496077Z (Reading database ... 90% 2021-05-17T18:03:13.5583587Z (Reading database ... 95% 2021-05-17T18:03:13.5584183Z (Reading database ... 100% 2021-05-17T18:03:13.5584939Z (Reading database ... 266807 files and directories currently installed.) 2021-05-17T18:03:13.5716896Z Preparing to unpack .../00-libaom0_1.0.0.errata1-3build1_amd64.deb ... 2021-05-17T18:03:13.5758801Z Unpacking libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-17T18:03:13.7100281Z Selecting previously unselected package libva2:amd64. 2021-05-17T18:03:13.7332516Z Preparing to unpack .../01-libva2_2.7.0-2_amd64.deb ... 2021-05-17T18:03:13.7372911Z Unpacking libva2:amd64 (2.7.0-2) ... 2021-05-17T18:03:13.7820898Z Selecting previously unselected package libva-drm2:amd64. 2021-05-17T18:03:13.8029944Z Preparing to unpack .../02-libva-drm2_2.7.0-2_amd64.deb ... 2021-05-17T18:03:13.8062590Z Unpacking libva-drm2:amd64 (2.7.0-2) ... 2021-05-17T18:03:13.8383130Z Selecting previously unselected package libva-x11-2:amd64. 2021-05-17T18:03:13.8703434Z Preparing to unpack .../03-libva-x11-2_2.7.0-2_amd64.deb ... 2021-05-17T18:03:13.8716227Z Unpacking libva-x11-2:amd64 (2.7.0-2) ... 2021-05-17T18:03:13.9140505Z Selecting previously unselected package libvdpau1:amd64. 2021-05-17T18:03:13.9352771Z Preparing to unpack .../04-libvdpau1_1.3-1ubuntu2_amd64.deb ... 2021-05-17T18:03:13.9379599Z Unpacking libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-17T18:03:13.9742595Z Selecting previously unselected package ocl-icd-libopencl1:amd64. 2021-05-17T18:03:13.9989038Z Preparing to unpack .../05-ocl-icd-libopencl1_2.2.11-1ubuntu1_amd64.deb ... 2021-05-17T18:03:14.0003613Z Unpacking ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-17T18:03:14.0285901Z Selecting previously unselected package libavutil56:amd64. 2021-05-17T18:03:14.0570451Z Preparing to unpack .../06-libavutil56_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-17T18:03:14.0579054Z Unpacking libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:14.1028707Z Selecting previously unselected package libcodec2-0.9:amd64. 2021-05-17T18:03:14.1306906Z Preparing to unpack .../07-libcodec2-0.9_0.9.2-2_amd64.deb ... 2021-05-17T18:03:14.1331852Z Unpacking libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-17T18:03:14.8340898Z Selecting previously unselected package libgsm1:amd64. 2021-05-17T18:03:14.8567660Z Preparing to unpack .../08-libgsm1_1.0.18-2_amd64.deb ... 2021-05-17T18:03:14.8577217Z Unpacking libgsm1:amd64 (1.0.18-2) ... 2021-05-17T18:03:14.8894584Z Selecting previously unselected package libmp3lame0:amd64. 2021-05-17T18:03:14.9176307Z Preparing to unpack .../09-libmp3lame0_3.100-3_amd64.deb ... 2021-05-17T18:03:14.9187277Z Unpacking libmp3lame0:amd64 (3.100-3) ... 2021-05-17T18:03:14.9571084Z Selecting previously unselected package libopus0:amd64. 2021-05-17T18:03:14.9803667Z Preparing to unpack .../10-libopus0_1.3.1-0ubuntu1_amd64.deb ... 2021-05-17T18:03:14.9821338Z Unpacking libopus0:amd64 (1.3.1-0ubuntu1) ... 2021-05-17T18:03:15.0220432Z Selecting previously unselected package libshine3:amd64. 2021-05-17T18:03:15.0497034Z Preparing to unpack .../11-libshine3_3.1.1-2_amd64.deb ... 2021-05-17T18:03:15.0506892Z Unpacking libshine3:amd64 (3.1.1-2) ... 2021-05-17T18:03:15.0819936Z Selecting previously unselected package libsnappy1v5:amd64. 2021-05-17T18:03:15.1045985Z Preparing to unpack .../12-libsnappy1v5_1.1.8-1build1_amd64.deb ... 2021-05-17T18:03:15.1054105Z Unpacking libsnappy1v5:amd64 (1.1.8-1build1) ... 2021-05-17T18:03:15.1378832Z Selecting previously unselected package libspeex1:amd64. 2021-05-17T18:03:15.1578312Z Preparing to unpack .../13-libspeex1_1.2~rc1.2-1.1ubuntu1_amd64.deb ... 2021-05-17T18:03:15.1589433Z Unpacking libspeex1:amd64 (1.2~rc1.2-1.1ubuntu1) ... 2021-05-17T18:03:15.1894768Z Selecting previously unselected package libsoxr0:amd64. 2021-05-17T18:03:15.2176572Z Preparing to unpack .../14-libsoxr0_0.1.3-2build1_amd64.deb ... 2021-05-17T18:03:15.2186044Z Unpacking libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-17T18:03:15.2540340Z Selecting previously unselected package libswresample3:amd64. 2021-05-17T18:03:15.2767699Z Preparing to unpack .../15-libswresample3_7%3a4.2.4-1ubuntu0.1_amd64.deb ... 2021-05-17T18:03:15.2783900Z Unpacking libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:15.3125311Z Selecting previously unselected package libtheora0:amd64. 2021-05-17T18:03:15.3341152Z Preparing to unpack .../16-libtheora0_1.1.1+dfsg.1-15ubuntu2_amd64.deb ... 2021-05-17T18:03:15.3359955Z Unpacking libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-17T18:03:15.3860320Z Selecting previously unselected package libtwolame0:amd64. 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2021-05-17T18:03:22.0328676Z Setting up libshine3:amd64 (3.1.1-2) ... 2021-05-17T18:03:22.0374078Z Setting up libcaca0:amd64 (0.99.beta19-2.1ubuntu1.20.04.1) ... 2021-05-17T18:03:22.0403386Z Setting up libtwolame0:amd64 (0.4.0-2) ... 2021-05-17T18:03:22.0428621Z Setting up libgsm1:amd64 (1.0.18-2) ... 2021-05-17T18:03:22.0456180Z Setting up libx264-155:amd64 (2:0.155.2917+git0a84d98-2) ... 2021-05-17T18:03:22.0476167Z Setting up libx265-179:amd64 (3.2.1-1build1) ... 2021-05-17T18:03:22.0500523Z Setting up libsoxr0:amd64 (0.1.3-2build1) ... 2021-05-17T18:03:22.0529879Z Setting up libaom0:amd64 (1.0.0.errata1-3build1) ... 2021-05-17T18:03:22.0559875Z Setting up libmysofa1:amd64 (1.0~dfsg0-1) ... 2021-05-17T18:03:22.0597756Z Setting up libdc1394-22:amd64 (2.2.5-2.1) ... 2021-05-17T18:03:22.0632313Z Setting up libcdio18:amd64 (2.0.0-2) ... 2021-05-17T18:03:22.0673032Z Setting up libxvidcore4:amd64 (2:1.3.7-1) ... 2021-05-17T18:03:22.0720601Z Setting up libsnappy1v5:amd64 (1.1.8-1build1) ... 2021-05-17T18:03:22.0752389Z Setting up libflac8:amd64 (1.3.3-1build1) ... 2021-05-17T18:03:22.0817847Z Setting up libass9:amd64 (1:0.14.0-2) ... 2021-05-17T18:03:22.0844144Z Setting up libva2:amd64 (2.7.0-2) ... 2021-05-17T18:03:22.0890273Z Setting up libigdgmm11:amd64 (20.1.1+ds1-1) ... 2021-05-17T18:03:22.0936029Z Setting up libcodec2-0.9:amd64 (0.9.2-2) ... 2021-05-17T18:03:22.0959167Z Setting up libopus0:amd64 (1.3.1-0ubuntu1) ... 2021-05-17T18:03:22.1000342Z Setting up intel-media-va-driver:amd64 (20.1.1+dfsg1-1) ... 2021-05-17T18:03:22.1045673Z Setting up libaacs0:amd64 (0.9.0-2) ... 2021-05-17T18:03:22.1070958Z Setting up libsndio7.0:amd64 (1.5.0-3) ... 2021-05-17T18:03:22.1112162Z Setting up libbdplus0:amd64 (0.1.2-3) ... 2021-05-17T18:03:22.1135835Z Setting up libvidstab1.1:amd64 (1.1.0-2) ... 2021-05-17T18:03:22.1155831Z Setting up libflite1:amd64 (2.1-release-3) ... 2021-05-17T18:03:22.1194866Z Setting up libva-drm2:amd64 (2.7.0-2) ... 2021-05-17T18:03:22.1229950Z Setting up ocl-icd-libopencl1:amd64 (2.2.11-1ubuntu1) ... 2021-05-17T18:03:22.1261920Z Setting up libasyncns0:amd64 (0.8-6) ... 2021-05-17T18:03:22.1299763Z Setting up libvdpau1:amd64 (1.3-1ubuntu2) ... 2021-05-17T18:03:22.1369104Z Setting up libwavpack1:amd64 (5.2.0-1ubuntu0.1) ... 2021-05-17T18:03:22.1409865Z Setting up libbs2b0:amd64 (3.1.0+dfsg-2.2build1) ... 2021-05-17T18:03:22.1469586Z Setting up libtheora0:amd64 (1.1.1+dfsg.1-15ubuntu2) ... 2021-05-17T18:03:22.1514244Z Setting up libopenal-data (1:1.19.1-1) ... 2021-05-17T18:03:22.1558524Z Setting up mesa-va-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-17T18:03:22.1596402Z Setting up libbluray2:amd64 (1:1.2.0-1) ... 2021-05-17T18:03:22.1624686Z Setting up libsamplerate0:amd64 (0.1.9-2) ... 2021-05-17T18:03:22.1663947Z Setting up libva-x11-2:amd64 (2.7.0-2) ... 2021-05-17T18:03:22.1703156Z Setting up libopenmpt0:amd64 (0.4.11-1build1) ... 2021-05-17T18:03:22.1723904Z Setting up libzvbi-common (0.2.35-17) ... 2021-05-17T18:03:22.1753321Z Setting up libmp3lame0:amd64 (3.100-3) ... 2021-05-17T18:03:22.1838381Z Setting up i965-va-driver:amd64 (2.4.0-0ubuntu1) ... 2021-05-17T18:03:22.1911925Z Setting up libvorbisenc2:amd64 (1.3.6-2ubuntu1) ... 2021-05-17T18:03:22.1958578Z Setting up libiec61883-0:amd64 (1.2.0-3) ... 2021-05-17T18:03:22.2005812Z Setting up libserd-0-0:amd64 (0.30.2-1) ... 2021-05-17T18:03:22.2045744Z Setting up libavc1394-0:amd64 (0.5.4-5) ... 2021-05-17T18:03:22.2073171Z Setting up mesa-vdpau-drivers:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-17T18:03:22.2113289Z Setting up libzvbi0:amd64 (0.2.35-17) ... 2021-05-17T18:03:22.2169453Z Setting up libcdio-cdda2:amd64 (10.2+2.0.0-1) ... 2021-05-17T18:03:22.2223043Z Setting up libcdio-paranoia2:amd64 (10.2+2.0.0-1) ... 2021-05-17T18:03:22.2256109Z Setting up libopenal1:amd64 (1:1.19.1-1) ... 2021-05-17T18:03:22.2279816Z Setting up libavutil56:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:22.2308520Z Setting up va-driver-all:amd64 (2.7.0-2) ... 2021-05-17T18:03:22.2351688Z Setting up libpostproc55:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:22.2453026Z Setting up librubberband2:amd64 (1.8.2-1build1) ... 2021-05-17T18:03:22.2492800Z Setting up libjack-jackd2-0:amd64 (1.9.12~dfsg-2ubuntu2) ... 2021-05-17T18:03:22.2528715Z Setting up vdpau-driver-all:amd64 (1.3-1ubuntu2) ... 2021-05-17T18:03:22.2561373Z Setting up libsord-0-0:amd64 (0.16.4-1) ... 2021-05-17T18:03:22.2585937Z Setting up libsratom-0-0:amd64 (0.6.4-1) ... 2021-05-17T18:03:22.2628340Z Setting up libswscale5:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:22.2670892Z Setting up libsndfile1:amd64 (1.0.28-7) ... 2021-05-17T18:03:22.2710100Z Setting up liblilv-0-0:amd64 (0.24.6-1ubuntu0.1) ... 2021-05-17T18:03:22.2748842Z Setting up libpulse0:amd64 (1:13.99.1-1ubuntu3.10) ... 2021-05-17T18:03:22.2845785Z Setting up libswresample3:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:22.2863698Z Setting up libavresample4:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:22.2890231Z Setting up libavcodec58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:22.2917625Z Setting up libsdl2-2.0-0:amd64 (2.0.10+dfsg1-3) ... 2021-05-17T18:03:22.2942111Z Setting up libchromaprint1:amd64 (1.4.3-3build1) ... 2021-05-17T18:03:22.2979174Z Setting up libavformat58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:22.3029960Z Setting up libavfilter7:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:22.3075367Z Setting up libavdevice58:amd64 (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:22.3113092Z Setting up ffmpeg (7:4.2.4-1ubuntu0.1) ... 2021-05-17T18:03:22.3206281Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:03:23.3438568Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:03:25.3407374Z Reading package lists... 2021-05-17T18:03:25.5056543Z Building dependency tree... 2021-05-17T18:03:25.5076068Z Reading state information... 2021-05-17T18:03:25.6632006Z The following additional packages will be installed: 2021-05-17T18:03:25.6635521Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-17T18:03:25.7117855Z The following NEW packages will be installed: 2021-05-17T18:03:25.7119469Z libmagick++-6-headers libmagick++-6.q16-8 libmagick++-6.q16-dev 2021-05-17T18:03:25.7127826Z libmagick++-dev 2021-05-17T18:03:25.7317225Z 0 upgraded, 4 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:25.7317967Z Need to get 309 kB of archives. 2021-05-17T18:03:25.7318978Z After this operation, 2202 kB of additional disk space will be used. 2021-05-17T18:03:25.7321060Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6-headers all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [47.5 kB] 2021-05-17T18:03:25.7344669Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-8 amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [133 kB] 2021-05-17T18:03:25.7362188Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-6.q16-dev amd64 8:6.9.10.23+dfsg-2.1ubuntu11.2 [127 kB] 2021-05-17T18:03:25.7375472Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libmagick++-dev all 8:6.9.10.23+dfsg-2.1ubuntu11.2 [1404 B] 2021-05-17T18:03:26.1319115Z Fetched 309 kB in 0s (15.1 MB/s) 2021-05-17T18:03:26.1720594Z Selecting previously unselected package libmagick++-6-headers. 2021-05-17T18:03:26.1797319Z (Reading database ... 2021-05-17T18:03:26.1798275Z (Reading database ... 5% 2021-05-17T18:03:26.1798996Z (Reading database ... 10% 2021-05-17T18:03:26.1799656Z (Reading database ... 15% 2021-05-17T18:03:26.1800323Z (Reading database ... 20% 2021-05-17T18:03:26.1800977Z (Reading database ... 25% 2021-05-17T18:03:26.1801632Z (Reading database ... 30% 2021-05-17T18:03:26.1802274Z (Reading database ... 35% 2021-05-17T18:03:26.1802924Z (Reading database ... 40% 2021-05-17T18:03:26.1803570Z (Reading database ... 45% 2021-05-17T18:03:26.1804204Z (Reading database ... 50% 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Preparing to unpack .../libmagick++-6.q16-8_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-17T18:03:26.3961599Z Unpacking libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T18:03:26.4461540Z Selecting previously unselected package libmagick++-6.q16-dev:amd64. 2021-05-17T18:03:26.4650778Z Preparing to unpack .../libmagick++-6.q16-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_amd64.deb ... 2021-05-17T18:03:26.4664756Z Unpacking libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T18:03:26.5261490Z Selecting previously unselected package libmagick++-dev. 2021-05-17T18:03:26.5485243Z Preparing to unpack .../libmagick++-dev_8%3a6.9.10.23+dfsg-2.1ubuntu11.2_all.deb ... 2021-05-17T18:03:26.5580347Z Unpacking libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T18:03:26.6175706Z Setting up libmagick++-6-headers (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T18:03:26.6284115Z Setting up libmagick++-6.q16-8:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T18:03:26.6348929Z Setting up libmagick++-6.q16-dev:amd64 (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T18:03:26.6390717Z Setting up libmagick++-dev (8:6.9.10.23+dfsg-2.1ubuntu11.2) ... 2021-05-17T18:03:26.6488929Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:03:28.6646648Z Reading package lists... 2021-05-17T18:03:28.8372439Z Building dependency tree... 2021-05-17T18:03:28.8393411Z Reading state information... 2021-05-17T18:03:28.9848721Z imagemagick is already the newest version (8:6.9.10.23+dfsg-2.1ubuntu11.2). 2021-05-17T18:03:28.9850834Z The following additional packages will be installed: 2021-05-17T18:03:28.9852680Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 libgs9 libgs9-common 2021-05-17T18:03:28.9854065Z libijs-0.35 libjbig2dec0 2021-05-17T18:03:28.9857469Z Suggested packages: 2021-05-17T18:03:28.9860406Z fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre 2021-05-17T18:03:28.9862746Z ghostscript-x 2021-05-17T18:03:29.0331482Z The following NEW packages will be installed: 2021-05-17T18:03:29.0336263Z fonts-droid-fallback fonts-noto-mono fonts-urw-base35 ghostscript libgs9 2021-05-17T18:03:29.0343838Z libgs9-common libijs-0.35 libjbig2dec0 2021-05-17T18:03:29.0527664Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:29.0528341Z Need to get 11.2 MB of archives. 2021-05-17T18:03:29.0529099Z After this operation, 39.1 MB of additional disk space will be used. 2021-05-17T18:03:29.0530847Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-droid-fallback all 1:6.0.1r16-1.1 [1805 kB] 2021-05-17T18:03:29.0901790Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 fonts-noto-mono all 20200323-1build1~ubuntu20.04.1 [80.6 kB] 2021-05-17T18:03:29.0913445Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 fonts-urw-base35 all 20170801.1-3 [6333 kB] 2021-05-17T18:03:29.2190277Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9-common all 9.50~dfsg-5ubuntu4.2 [681 kB] 2021-05-17T18:03:29.2357706Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libijs-0.35 amd64 0.35-15 [15.7 kB] 2021-05-17T18:03:29.2363803Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libjbig2dec0 amd64 0.18-1ubuntu1 [60.0 kB] 2021-05-17T18:03:29.2382352Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgs9 amd64 9.50~dfsg-5ubuntu4.2 [2172 kB] 2021-05-17T18:03:29.2838932Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 ghostscript amd64 9.50~dfsg-5ubuntu4.2 [51.6 kB] 2021-05-17T18:03:29.6821372Z Fetched 11.2 MB in 0s (45.6 MB/s) 2021-05-17T18:03:29.7245570Z Selecting previously unselected package fonts-droid-fallback. 2021-05-17T18:03:29.7321134Z (Reading database ... 2021-05-17T18:03:29.7321967Z (Reading database ... 5% 2021-05-17T18:03:29.7322658Z (Reading 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... 100% 2021-05-17T18:03:29.8511563Z (Reading database ... 267393 files and directories currently installed.) 2021-05-17T18:03:29.8634521Z Preparing to unpack .../0-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... 2021-05-17T18:03:29.8869150Z Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-17T18:03:30.0861419Z Selecting previously unselected package fonts-noto-mono. 2021-05-17T18:03:30.1107362Z Preparing to unpack .../1-fonts-noto-mono_20200323-1build1~ubuntu20.04.1_all.deb ... 2021-05-17T18:03:30.1129916Z Unpacking fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-17T18:03:30.1541133Z Selecting previously unselected package fonts-urw-base35. 2021-05-17T18:03:30.1769878Z Preparing to unpack .../2-fonts-urw-base35_20170801.1-3_all.deb ... 2021-05-17T18:03:30.2361757Z Unpacking fonts-urw-base35 (20170801.1-3) ... 2021-05-17T18:03:30.6101349Z Selecting previously unselected package libgs9-common. 2021-05-17T18:03:30.6330251Z Preparing to unpack .../3-libgs9-common_9.50~dfsg-5ubuntu4.2_all.deb ... 2021-05-17T18:03:30.6349392Z Unpacking libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T18:03:30.7323945Z Selecting previously unselected package libijs-0.35:amd64. 2021-05-17T18:03:30.7603687Z Preparing to unpack .../4-libijs-0.35_0.35-15_amd64.deb ... 2021-05-17T18:03:30.7646852Z Unpacking libijs-0.35:amd64 (0.35-15) ... 2021-05-17T18:03:30.7983678Z Selecting previously unselected package libjbig2dec0:amd64. 2021-05-17T18:03:30.8264817Z Preparing to unpack .../5-libjbig2dec0_0.18-1ubuntu1_amd64.deb ... 2021-05-17T18:03:30.8275483Z Unpacking libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-17T18:03:30.8779778Z Selecting previously unselected package libgs9:amd64. 2021-05-17T18:03:30.8993261Z Preparing to unpack .../6-libgs9_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-17T18:03:30.9017094Z Unpacking libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T18:03:31.1772485Z Selecting previously unselected package ghostscript. 2021-05-17T18:03:31.2051322Z Preparing to unpack .../7-ghostscript_9.50~dfsg-5ubuntu4.2_amd64.deb ... 2021-05-17T18:03:31.2065636Z Unpacking ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T18:03:31.2746228Z Setting up fonts-noto-mono (20200323-1build1~ubuntu20.04.1) ... 2021-05-17T18:03:31.2847391Z Setting up libijs-0.35:amd64 (0.35-15) ... 2021-05-17T18:03:31.2890455Z Setting up fonts-urw-base35 (20170801.1-3) ... 2021-05-17T18:03:31.3480143Z Setting up libjbig2dec0:amd64 (0.18-1ubuntu1) ... 2021-05-17T18:03:31.3512827Z Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... 2021-05-17T18:03:31.3801345Z Setting up libgs9-common (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T18:03:31.3861574Z Setting up libgs9:amd64 (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T18:03:31.3900505Z Setting up ghostscript (9.50~dfsg-5ubuntu4.2) ... 2021-05-17T18:03:31.4032487Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-17T18:03:31.5021786Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:03:31.5238414Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:03:34.4718424Z Reading package lists... 2021-05-17T18:03:34.6352263Z Building dependency tree... 2021-05-17T18:03:34.6371189Z Reading state information... 2021-05-17T18:03:34.7810306Z The following additional packages will be installed: 2021-05-17T18:03:34.7827069Z libudunits2-0 libudunits2-data 2021-05-17T18:03:34.8257832Z The following NEW packages will be installed: 2021-05-17T18:03:34.8260315Z libudunits2-0 libudunits2-data libudunits2-dev 2021-05-17T18:03:34.8702969Z 0 upgraded, 3 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:34.8703832Z Need to get 429 kB of archives. 2021-05-17T18:03:34.8704788Z After this operation, 1026 kB of additional disk space will be used. 2021-05-17T18:03:34.8707036Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-data all 2.2.26-5 [18.8 kB] 2021-05-17T18:03:34.8721271Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-0 amd64 2.2.26-5 [48.9 kB] 2021-05-17T18:03:34.8730391Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libudunits2-dev amd64 2.2.26-5 [362 kB] 2021-05-17T18:03:35.2679791Z Fetched 429 kB in 0s (8615 kB/s) 2021-05-17T18:03:35.2976485Z Selecting previously unselected package libudunits2-data. 2021-05-17T18:03:35.3048691Z (Reading database ... 2021-05-17T18:03:35.3049499Z (Reading database ... 5% 2021-05-17T18:03:35.3050190Z (Reading database ... 10% 2021-05-17T18:03:35.3050864Z (Reading database ... 15% 2021-05-17T18:03:35.3051517Z (Reading database ... 20% 2021-05-17T18:03:35.3052185Z (Reading database ... 25% 2021-05-17T18:03:35.3052847Z (Reading database ... 30% 2021-05-17T18:03:35.3053491Z (Reading database ... 35% 2021-05-17T18:03:35.3054148Z (Reading database ... 40% 2021-05-17T18:03:35.3054995Z (Reading database ... 45% 2021-05-17T18:03:35.3055665Z (Reading database ... 50% 2021-05-17T18:03:35.3093026Z (Reading database ... 55% 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(2.2.26-5) ... 2021-05-17T18:03:35.5367211Z Selecting previously unselected package libudunits2-dev:amd64. 2021-05-17T18:03:35.5625117Z Preparing to unpack .../libudunits2-dev_2.2.26-5_amd64.deb ... 2021-05-17T18:03:35.5646365Z Unpacking libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-17T18:03:35.6390758Z Setting up libudunits2-data (2.2.26-5) ... 2021-05-17T18:03:35.6430376Z Setting up libudunits2-0:amd64 (2.2.26-5) ... 2021-05-17T18:03:35.6483445Z Setting up libudunits2-dev:amd64 (2.2.26-5) ... 2021-05-17T18:03:35.6534688Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-17T18:03:35.7565234Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:03:37.7541411Z Reading package lists... 2021-05-17T18:03:37.9220411Z Building dependency tree... 2021-05-17T18:03:37.9240007Z Reading state information... 2021-05-17T18:03:38.1177894Z The following NEW packages will be installed: 2021-05-17T18:03:38.1181003Z libjq-dev 2021-05-17T18:03:38.1356839Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:38.1357746Z Need to get 11.2 kB of archives. 2021-05-17T18:03:38.1358454Z After this operation, 47.1 kB of additional disk space will be used. 2021-05-17T18:03:38.1360345Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libjq-dev amd64 1.6-1ubuntu0.20.04.1 [11.2 kB] 2021-05-17T18:03:38.5246426Z Fetched 11.2 kB in 0s (782 kB/s) 2021-05-17T18:03:38.5538223Z Selecting previously unselected package libjq-dev:amd64. 2021-05-17T18:03:38.5611773Z (Reading database ... 2021-05-17T18:03:38.5612594Z (Reading database ... 5% 2021-05-17T18:03:38.5613229Z (Reading database ... 10% 2021-05-17T18:03:38.5613838Z (Reading database ... 15% 2021-05-17T18:03:38.5614438Z (Reading database ... 20% 2021-05-17T18:03:38.5615024Z (Reading database ... 25% 2021-05-17T18:03:38.5615623Z (Reading database ... 30% 2021-05-17T18:03:38.5616216Z (Reading database ... 35% 2021-05-17T18:03:38.5616812Z (Reading database ... 40% 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(1.6-1ubuntu0.20.04.1) ... 2021-05-17T18:03:40.7221214Z Reading package lists... 2021-05-17T18:03:40.8824786Z Building dependency tree... 2021-05-17T18:03:40.8843025Z Reading state information... 2021-05-17T18:03:41.0759104Z The following NEW packages will be installed: 2021-05-17T18:03:41.0763922Z libmng2 2021-05-17T18:03:41.0948732Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:41.0949987Z Need to get 168 kB of archives. 2021-05-17T18:03:41.0951155Z After this operation, 571 kB of additional disk space will be used. 2021-05-17T18:03:41.0952995Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmng2 amd64 2.0.3+dfsg-3 [168 kB] 2021-05-17T18:03:41.4985866Z Fetched 168 kB in 0s (7615 kB/s) 2021-05-17T18:03:41.5322786Z Selecting previously unselected package libmng2:amd64. 2021-05-17T18:03:41.5397301Z (Reading database ... 2021-05-17T18:03:41.5398025Z (Reading database ... 5% 2021-05-17T18:03:41.5398707Z (Reading database ... 10% 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2021-05-17T18:03:41.6579086Z (Reading database ... 267992 files and directories currently installed.) 2021-05-17T18:03:41.6700777Z Preparing to unpack .../libmng2_2.0.3+dfsg-3_amd64.deb ... 2021-05-17T18:03:41.6746269Z Unpacking libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-17T18:03:41.7545138Z Setting up libmng2:amd64 (2.0.3+dfsg-3) ... 2021-05-17T18:03:41.7603417Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:03:43.7329895Z Reading package lists... 2021-05-17T18:03:43.9013515Z Building dependency tree... 2021-05-17T18:03:43.9031951Z Reading state information... 2021-05-17T18:03:44.0202422Z E: Unable to locate package libmng1 2021-05-17T18:03:44.0815321Z Reading package lists... 2021-05-17T18:03:44.2431287Z Building dependency tree... 2021-05-17T18:03:44.2449986Z Reading state information... 2021-05-17T18:03:44.3633973Z E: Unable to locate package libapparmor-devel 2021-05-17T18:03:44.4238358Z Reading package lists... 2021-05-17T18:03:44.5868459Z Building dependency tree... 2021-05-17T18:03:44.5887201Z Reading state information... 2021-05-17T18:03:44.7365712Z The following additional packages will be installed: 2021-05-17T18:03:44.7367039Z libij-java 2021-05-17T18:03:44.7812675Z The following NEW packages will be installed: 2021-05-17T18:03:44.7816760Z imagej libij-java 2021-05-17T18:03:44.8805422Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:44.8806395Z Need to get 2328 kB of archives. 2021-05-17T18:03:44.8807229Z After this operation, 2498 kB of additional disk space will be used. 2021-05-17T18:03:44.8809364Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libij-java all 1.52r-1 [2284 kB] 2021-05-17T18:03:44.9504920Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 imagej all 1.52r-1 [43.7 kB] 2021-05-17T18:03:45.3490706Z Fetched 2328 kB in 0s (13.8 MB/s) 2021-05-17T18:03:45.3810712Z Selecting previously unselected package libij-java. 2021-05-17T18:03:45.3882141Z (Reading 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lists... 2021-05-17T18:03:49.3553803Z Building dependency tree... 2021-05-17T18:03:49.3574549Z Reading state information... 2021-05-17T18:03:49.5045132Z Suggested packages: 2021-05-17T18:03:49.5047792Z bowtie2-examples 2021-05-17T18:03:49.5494814Z The following NEW packages will be installed: 2021-05-17T18:03:49.5504646Z bowtie2 2021-05-17T18:03:49.5696400Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:49.5697164Z Need to get 1324 kB of archives. 2021-05-17T18:03:49.5697891Z After this operation, 5630 kB of additional disk space will be used. 2021-05-17T18:03:49.5699878Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 bowtie2 amd64 2.3.5.1-6build1 [1324 kB] 2021-05-17T18:03:49.9971075Z Fetched 1324 kB in 0s (27.1 MB/s) 2021-05-17T18:03:50.0274701Z Selecting previously unselected package bowtie2. 2021-05-17T18:03:50.0351617Z (Reading database ... 2021-05-17T18:03:50.0352470Z (Reading database ... 5% 2021-05-17T18:03:50.0353162Z 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package. 2021-05-17T18:03:53.6923583Z This may mean that the package is missing, has been obsoleted, or 2021-05-17T18:03:53.6924639Z is only available from another source 2021-05-17T18:03:53.6925258Z 2021-05-17T18:03:53.7871607Z E: Package 'insighttoolkit4-python' has no installation candidate 2021-05-17T18:03:53.8476728Z Reading package lists... 2021-05-17T18:03:54.0058731Z Building dependency tree... 2021-05-17T18:03:54.0078196Z Reading state information... 2021-05-17T18:03:54.0304132Z Package libav-tools is not available, but is referred to by another package. 2021-05-17T18:03:54.0305677Z This may mean that the package is missing, has been obsoleted, or 2021-05-17T18:03:54.0307587Z is only available from another source 2021-05-17T18:03:54.0308338Z However the following packages replace it: 2021-05-17T18:03:54.0308925Z ffmpeg 2021-05-17T18:03:54.0309209Z 2021-05-17T18:03:54.1242130Z E: Package 'libav-tools' has no installation candidate 2021-05-17T18:03:54.1846875Z Reading package lists... 2021-05-17T18:03:54.3446652Z Building dependency tree... 2021-05-17T18:03:54.3464603Z Reading state information... 2021-05-17T18:03:54.4914380Z The following additional packages will be installed: 2021-05-17T18:03:54.4916950Z libgcrypt20-dev libgit2-28 libgpg-error-dev libhttp-parser-dev 2021-05-17T18:03:54.4918926Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-17T18:03:54.4920604Z libssh2-1-dev 2021-05-17T18:03:54.4921447Z Suggested packages: 2021-05-17T18:03:54.4922521Z libgcrypt20-doc libmbedtls-doc 2021-05-17T18:03:54.5402132Z The following NEW packages will be installed: 2021-05-17T18:03:54.5405427Z libgcrypt20-dev libgit2-28 libgit2-dev libgpg-error-dev libhttp-parser-dev 2021-05-17T18:03:54.5410446Z libhttp-parser2.9 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 2021-05-17T18:03:54.5416297Z libssh2-1-dev 2021-05-17T18:03:54.5601232Z 0 upgraded, 11 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:03:54.5601935Z Need to get 2667 kB of archives. 2021-05-17T18:03:54.5602677Z After this operation, 11.2 MB of additional disk space will be used. 2021-05-17T18:03:54.5604365Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB] 2021-05-17T18:03:54.5664081Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1 [470 kB] 2021-05-17T18:03:54.5767613Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB] 2021-05-17T18:03:54.5772974Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB] 2021-05-17T18:03:54.5787270Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB] 2021-05-17T18:03:54.5795962Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB] 2021-05-17T18:03:54.5806175Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB] 2021-05-17T18:03:54.5904438Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB] 2021-05-17T18:03:54.5990666Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB] 2021-05-17T18:03:54.6037840Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB] 2021-05-17T18:03:54.6049285Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB] 2021-05-17T18:03:55.0157361Z Fetched 2667 kB in 0s (35.0 MB/s) 2021-05-17T18:03:55.0474815Z Selecting previously unselected package libgpg-error-dev. 2021-05-17T18:03:55.0546801Z (Reading database ... 2021-05-17T18:03:55.0547604Z (Reading database ... 5% 2021-05-17T18:03:55.0548290Z (Reading database 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2021-05-17T18:03:55.1686949Z (Reading database ... 268047 files and directories currently installed.) 2021-05-17T18:03:55.1808596Z Preparing to unpack .../00-libgpg-error-dev_1.37-1_amd64.deb ... 2021-05-17T18:03:55.1829517Z Unpacking libgpg-error-dev (1.37-1) ... 2021-05-17T18:03:55.2260607Z Selecting previously unselected package libgcrypt20-dev. 2021-05-17T18:03:55.2490343Z Preparing to unpack .../01-libgcrypt20-dev_1.8.5-5ubuntu1_amd64.deb ... 2021-05-17T18:03:55.2501548Z Unpacking libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-17T18:03:55.3300564Z Selecting previously unselected package libhttp-parser2.9:amd64. 2021-05-17T18:03:55.3521238Z Preparing to unpack .../02-libhttp-parser2.9_2.9.2-2_amd64.deb ... 2021-05-17T18:03:55.3549011Z Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-17T18:03:55.3860515Z Selecting previously unselected package libmbedcrypto3:amd64. 2021-05-17T18:03:55.4105233Z Preparing to unpack .../03-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ... 2021-05-17T18:03:55.4121012Z Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T18:03:55.4564569Z Selecting previously unselected package libmbedx509-0:amd64. 2021-05-17T18:03:55.4847263Z Preparing to unpack .../04-libmbedx509-0_2.16.4-1ubuntu2_amd64.deb ... 2021-05-17T18:03:55.4858948Z Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T18:03:55.5214228Z Selecting previously unselected package libmbedtls12:amd64. 2021-05-17T18:03:55.5501172Z Preparing to unpack .../05-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ... 2021-05-17T18:03:55.5515218Z Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T18:03:55.5980815Z Selecting previously unselected package libgit2-28:amd64. 2021-05-17T18:03:55.6217387Z Preparing to unpack .../06-libgit2-28_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-17T18:03:55.6235397Z Unpacking libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-17T18:03:55.6869635Z Selecting previously unselected package libmbedtls-dev:amd64. 2021-05-17T18:03:55.7157331Z Preparing to unpack .../07-libmbedtls-dev_2.16.4-1ubuntu2_amd64.deb ... 2021-05-17T18:03:55.7173230Z Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T18:03:55.7861440Z Selecting previously unselected package libssh2-1-dev:amd64. 2021-05-17T18:03:55.8132282Z Preparing to unpack .../08-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ... 2021-05-17T18:03:55.8159009Z Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-17T18:03:55.8780633Z Selecting previously unselected package libhttp-parser-dev. 2021-05-17T18:03:55.8978424Z Preparing to unpack .../09-libhttp-parser-dev_2.9.2-2_amd64.deb ... 2021-05-17T18:03:55.8989901Z Unpacking libhttp-parser-dev (2.9.2-2) ... 2021-05-17T18:03:55.9380421Z Selecting previously unselected package libgit2-dev:amd64. 2021-05-17T18:03:55.9575764Z Preparing to unpack .../10-libgit2-dev_0.28.4+dfsg.1-2_amd64.deb ... 2021-05-17T18:03:55.9603896Z Unpacking libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-17T18:03:56.0857160Z Setting up libgpg-error-dev (1.37-1) ... 2021-05-17T18:03:56.0940550Z Setting up libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T18:03:56.1025236Z Setting up libhttp-parser2.9:amd64 (2.9.2-2) ... 2021-05-17T18:03:56.1077361Z Setting up libhttp-parser-dev (2.9.2-2) ... 2021-05-17T18:03:56.1153450Z Setting up libmbedx509-0:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T18:03:56.1242530Z Setting up libmbedtls12:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T18:03:56.1323429Z Setting up libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ... 2021-05-17T18:03:56.1417399Z Setting up libgcrypt20-dev (1.8.5-5ubuntu1) ... 2021-05-17T18:03:56.1540573Z Setting up libssh2-1-dev:amd64 (1.8.0-2.1build1) ... 2021-05-17T18:03:56.1648303Z Setting up libgit2-28:amd64 (0.28.4+dfsg.1-2) ... 2021-05-17T18:03:56.1695594Z Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ... 2021-05-17T18:03:56.1766013Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:04:00.7970086Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-17T18:04:00.9010342Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:04:02.8770849Z Reading package lists... 2021-05-17T18:04:03.0475833Z Building dependency tree... 2021-05-17T18:04:03.0494516Z Reading state information... 2021-05-17T18:04:03.2910746Z libtiff-dev is already the newest version (4.1.0+git191117-2ubuntu0.20.04.1). 2021-05-17T18:04:03.2912224Z libtiff-dev set to manually installed. 2021-05-17T18:04:03.2913241Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:04:03.3515822Z Reading package lists... 2021-05-17T18:04:03.5141163Z Building dependency tree... 2021-05-17T18:04:03.5159917Z Reading state information... 2021-05-17T18:04:03.7327211Z unixodbc-dev is already the newest version (2.3.7). 2021-05-17T18:04:03.7329343Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:04:03.7926128Z Reading package lists... 2021-05-17T18:04:03.9537121Z Building dependency tree... 2021-05-17T18:04:03.9555743Z Reading state information... 2021-05-17T18:04:04.1456911Z The following NEW packages will be installed: 2021-05-17T18:04:04.1459196Z libsodium-dev 2021-05-17T18:04:04.1648633Z 0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:04:04.1649446Z Need to get 169 kB of archives. 2021-05-17T18:04:04.1650162Z After this operation, 826 kB of additional disk space will be used. 2021-05-17T18:04:04.1651964Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libsodium-dev amd64 1.0.18-1 [169 kB] 2021-05-17T18:04:04.5561473Z Fetched 169 kB in 0s (8670 kB/s) 2021-05-17T18:04:04.5874072Z Selecting previously unselected package libsodium-dev:amd64. 2021-05-17T18:04:04.5949889Z (Reading database ... 2021-05-17T18:04:04.5950399Z (Reading database ... 5% 2021-05-17T18:04:04.5951058Z (Reading database ... 10% 2021-05-17T18:04:04.5951989Z (Reading database ... 15% 2021-05-17T18:04:04.5952481Z (Reading database ... 20% 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2021-05-17T18:04:04.7231218Z Preparing to unpack .../libsodium-dev_1.0.18-1_amd64.deb ... 2021-05-17T18:04:04.7248020Z Unpacking libsodium-dev:amd64 (1.0.18-1) ... 2021-05-17T18:04:04.7981273Z Setting up libsodium-dev:amd64 (1.0.18-1) ... 2021-05-17T18:04:06.7373984Z Reading package lists... 2021-05-17T18:04:06.8867269Z Building dependency tree... 2021-05-17T18:04:06.8886946Z Reading state information... 2021-05-17T18:04:07.0300698Z The following additional packages will be installed: 2021-05-17T18:04:07.0304853Z libarchive-dev liblept5 libtesseract4 tesseract-ocr tesseract-ocr-osd 2021-05-17T18:04:07.0757063Z The following NEW packages will be installed: 2021-05-17T18:04:07.0763493Z libarchive-dev liblept5 libleptonica-dev libtesseract-dev libtesseract4 2021-05-17T18:04:07.0765035Z tesseract-ocr tesseract-ocr-eng tesseract-ocr-osd 2021-05-17T18:04:07.1254671Z 0 upgraded, 8 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:04:07.1255348Z Need to get 10.4 MB of archives. 2021-05-17T18:04:07.1256114Z After this operation, 38.0 MB of additional disk space will be used. 2021-05-17T18:04:07.1257998Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libarchive-dev amd64 3.4.0-2ubuntu1 [490 kB] 2021-05-17T18:04:07.1497447Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblept5 amd64 1.79.0-1 [999 kB] 2021-05-17T18:04:07.1930916Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libleptonica-dev amd64 1.79.0-1 [1389 kB] 2021-05-17T18:04:07.2410394Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract4 amd64 4.1.1-2build2 [1237 kB] 2021-05-17T18:04:07.2840982Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libtesseract-dev amd64 4.1.1-2build2 [1463 kB] 2021-05-17T18:04:07.3394356Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-eng all 1:4.00~git30-7274cfa-1 [1598 kB] 2021-05-17T18:04:07.3851416Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr-osd all 1:4.00~git30-7274cfa-1 [2990 kB] 2021-05-17T18:04:07.4685638Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 tesseract-ocr amd64 4.1.1-2build2 [262 kB] 2021-05-17T18:04:07.8772734Z Fetched 10.4 MB in 0s (26.0 MB/s) 2021-05-17T18:04:07.9111223Z Selecting previously unselected package libarchive-dev:amd64. 2021-05-17T18:04:07.9187542Z (Reading database ... 2021-05-17T18:04:07.9188225Z (Reading database ... 5% 2021-05-17T18:04:07.9188850Z (Reading database ... 10% 2021-05-17T18:04:07.9189471Z (Reading database ... 15% 2021-05-17T18:04:07.9190095Z (Reading database ... 20% 2021-05-17T18:04:07.9190722Z (Reading database ... 25% 2021-05-17T18:04:07.9191317Z (Reading database ... 30% 2021-05-17T18:04:07.9191926Z (Reading database ... 35% 2021-05-17T18:04:07.9192501Z (Reading database ... 40% 2021-05-17T18:04:07.9193083Z (Reading database ... 45% 2021-05-17T18:04:07.9193675Z (Reading database 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.../1-liblept5_1.79.0-1_amd64.deb ... 2021-05-17T18:04:08.1552671Z Unpacking liblept5:amd64 (1.79.0-1) ... 2021-05-17T18:04:08.2741613Z Selecting previously unselected package libleptonica-dev:amd64. 2021-05-17T18:04:08.2963660Z Preparing to unpack .../2-libleptonica-dev_1.79.0-1_amd64.deb ... 2021-05-17T18:04:08.2980175Z Unpacking libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-17T18:04:08.4460893Z Selecting previously unselected package libtesseract4:amd64. 2021-05-17T18:04:08.4689781Z Preparing to unpack .../3-libtesseract4_4.1.1-2build2_amd64.deb ... 2021-05-17T18:04:08.4723400Z Unpacking libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-17T18:04:08.6061552Z Selecting previously unselected package libtesseract-dev:amd64. 2021-05-17T18:04:08.6323210Z Preparing to unpack .../4-libtesseract-dev_4.1.1-2build2_amd64.deb ... 2021-05-17T18:04:08.6368645Z Unpacking libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-17T18:04:08.8100939Z Selecting previously unselected package tesseract-ocr-eng. 2021-05-17T18:04:08.8327126Z Preparing to unpack .../5-tesseract-ocr-eng_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-17T18:04:08.8344063Z Unpacking tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-17T18:04:08.9981405Z Selecting previously unselected package tesseract-ocr-osd. 2021-05-17T18:04:09.0210782Z Preparing to unpack .../6-tesseract-ocr-osd_1%3a4.00~git30-7274cfa-1_all.deb ... 2021-05-17T18:04:09.0249413Z Unpacking tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-17T18:04:09.3861712Z Selecting previously unselected package tesseract-ocr. 2021-05-17T18:04:09.4116499Z Preparing to unpack .../7-tesseract-ocr_4.1.1-2build2_amd64.deb ... 2021-05-17T18:04:09.4152592Z Unpacking tesseract-ocr (4.1.1-2build2) ... 2021-05-17T18:04:09.5018267Z Setting up tesseract-ocr-eng (1:4.00~git30-7274cfa-1) ... 2021-05-17T18:04:09.5083749Z Setting up liblept5:amd64 (1.79.0-1) ... 2021-05-17T18:04:09.5145541Z Setting up libleptonica-dev:amd64 (1.79.0-1) ... 2021-05-17T18:04:09.5207545Z Setting up libtesseract4:amd64 (4.1.1-2build2) ... 2021-05-17T18:04:09.5254553Z Setting up libarchive-dev:amd64 (3.4.0-2ubuntu1) ... 2021-05-17T18:04:09.5317338Z Setting up tesseract-ocr-osd (1:4.00~git30-7274cfa-1) ... 2021-05-17T18:04:09.5407580Z Setting up libtesseract-dev:amd64 (4.1.1-2build2) ... 2021-05-17T18:04:09.5467807Z Setting up tesseract-ocr (4.1.1-2build2) ... 2021-05-17T18:04:09.5519136Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:04:12.3420497Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:04:14.3302543Z Reading package lists... 2021-05-17T18:04:14.5028071Z Building dependency tree... 2021-05-17T18:04:14.5046608Z Reading state information... 2021-05-17T18:04:14.7315670Z wget is already the newest version (1.20.3-1ubuntu1). 2021-05-17T18:04:14.7317234Z 0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:04:14.7924268Z Reading package lists... 2021-05-17T18:04:14.9610862Z Building dependency tree... 2021-05-17T18:04:14.9631406Z Reading state information... 2021-05-17T18:04:15.1257895Z The following additional packages will be installed: 2021-05-17T18:04:15.1260751Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-17T18:04:15.1262450Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev 2021-05-17T18:04:15.1268295Z Suggested packages: 2021-05-17T18:04:15.1269263Z doc-base krb5-doc krb5-user libnorm-doc 2021-05-17T18:04:15.1758653Z The following NEW packages will be installed: 2021-05-17T18:04:15.1761731Z comerr-dev krb5-multidev libgssrpc4 libkadm5clnt-mit11 libkadm5srv-mit11 2021-05-17T18:04:15.1768026Z libkdb5-9 libkrb5-dev libnorm-dev libpgm-dev libzmq3-dev 2021-05-17T18:04:15.1953964Z 0 upgraded, 10 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:04:15.1954967Z Need to get 1459 kB of archives. 2021-05-17T18:04:15.1955704Z After this operation, 7754 kB of additional disk space will be used. 2021-05-17T18:04:15.1957559Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libgssrpc4 amd64 1.17-6ubuntu4.1 [55.4 kB] 2021-05-17T18:04:15.2002336Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkdb5-9 amd64 1.17-6ubuntu4.1 [37.3 kB] 2021-05-17T18:04:15.2014793Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5srv-mit11 amd64 1.17-6ubuntu4.1 [49.5 kB] 2021-05-17T18:04:15.2042367Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkadm5clnt-mit11 amd64 1.17-6ubuntu4.1 [37.6 kB] 2021-05-17T18:04:15.2054026Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 comerr-dev amd64 2.1-1.45.5-2ubuntu1 [39.9 kB] 2021-05-17T18:04:15.2070031Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 krb5-multidev amd64 1.17-6ubuntu4.1 [120 kB] 2021-05-17T18:04:15.2108133Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnorm-dev amd64 1.5.8+dfsg2-2build1 [463 kB] 2021-05-17T18:04:15.2252486Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpgm-dev amd64 5.2.122~dfsg-3ubuntu1 [189 kB] 2021-05-17T18:04:15.2306259Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libkrb5-dev amd64 1.17-6ubuntu4.1 [11.7 kB] 2021-05-17T18:04:15.2314664Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzmq3-dev amd64 4.3.2-2ubuntu1 [455 kB] 2021-05-17T18:04:15.6447409Z Fetched 1459 kB in 0s (23.3 MB/s) 2021-05-17T18:04:15.6811182Z Selecting previously unselected package libgssrpc4:amd64. 2021-05-17T18:04:15.6891655Z (Reading database ... 2021-05-17T18:04:15.6892496Z (Reading database ... 5% 2021-05-17T18:04:15.6893408Z (Reading database ... 10% 2021-05-17T18:04:15.6893931Z (Reading database ... 15% 2021-05-17T18:04:15.6894422Z (Reading database ... 20% 2021-05-17T18:04:15.6894955Z (Reading database ... 25% 2021-05-17T18:04:15.6895460Z (Reading database ... 30% 2021-05-17T18:04:15.6895948Z (Reading database ... 35% 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2021-05-17T18:04:15.8627146Z Selecting previously unselected package libkdb5-9:amd64. 2021-05-17T18:04:15.8905669Z Preparing to unpack .../1-libkdb5-9_1.17-6ubuntu4.1_amd64.deb ... 2021-05-17T18:04:15.8941275Z Unpacking libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:15.9300584Z Selecting previously unselected package libkadm5srv-mit11:amd64. 2021-05-17T18:04:15.9546878Z Preparing to unpack .../2-libkadm5srv-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-17T18:04:15.9571854Z Unpacking libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:15.9922838Z Selecting previously unselected package libkadm5clnt-mit11:amd64. 2021-05-17T18:04:16.0204705Z Preparing to unpack .../3-libkadm5clnt-mit11_1.17-6ubuntu4.1_amd64.deb ... 2021-05-17T18:04:16.0219697Z Unpacking libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:16.0701106Z Selecting previously unselected package comerr-dev:amd64. 2021-05-17T18:04:16.0895442Z Preparing to unpack .../4-comerr-dev_2.1-1.45.5-2ubuntu1_amd64.deb ... 2021-05-17T18:04:16.0939095Z Unpacking comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-17T18:04:16.1341226Z Selecting previously unselected package krb5-multidev:amd64. 2021-05-17T18:04:16.1541709Z Preparing to unpack .../5-krb5-multidev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-17T18:04:16.1567778Z Unpacking krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:16.1981726Z Selecting previously unselected package libnorm-dev:amd64. 2021-05-17T18:04:16.2223720Z Preparing to unpack .../6-libnorm-dev_1.5.8+dfsg2-2build1_amd64.deb ... 2021-05-17T18:04:16.2239989Z Unpacking libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-17T18:04:16.3021764Z Selecting previously unselected package libpgm-dev:amd64. 2021-05-17T18:04:16.3240921Z Preparing to unpack .../7-libpgm-dev_5.2.122~dfsg-3ubuntu1_amd64.deb ... 2021-05-17T18:04:16.3253411Z Unpacking libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-17T18:04:16.3741273Z Selecting previously unselected package libkrb5-dev:amd64. 2021-05-17T18:04:16.3996858Z Preparing to unpack .../8-libkrb5-dev_1.17-6ubuntu4.1_amd64.deb ... 2021-05-17T18:04:16.4023653Z Unpacking libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:16.4333678Z Selecting previously unselected package libzmq3-dev:amd64. 2021-05-17T18:04:16.4576767Z Preparing to unpack .../9-libzmq3-dev_4.3.2-2ubuntu1_amd64.deb ... 2021-05-17T18:04:16.4596801Z Unpacking libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-17T18:04:16.5640409Z Setting up libnorm-dev:amd64 (1.5.8+dfsg2-2build1) ... 2021-05-17T18:04:16.5708582Z Setting up libgssrpc4:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:16.5762739Z Setting up libpgm-dev:amd64 (5.2.122~dfsg-3ubuntu1) ... 2021-05-17T18:04:16.5809537Z Setting up comerr-dev:amd64 (2.1-1.45.5-2ubuntu1) ... 2021-05-17T18:04:16.5855130Z Setting up libkdb5-9:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:16.5887065Z Setting up libkadm5srv-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:16.5926539Z Setting up libkadm5clnt-mit11:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:16.5992570Z Setting up krb5-multidev:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:16.6060016Z Setting up libkrb5-dev:amd64 (1.17-6ubuntu4.1) ... 2021-05-17T18:04:16.6122203Z Setting up libzmq3-dev:amd64 (4.3.2-2ubuntu1) ... 2021-05-17T18:04:16.6160805Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:04:16.6400216Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:04:19.6765809Z Processing triggers for install-info (6.7.0.dfsg.2-5) ... 2021-05-17T18:04:21.7533001Z Reading package lists... 2021-05-17T18:04:21.9282088Z Building dependency tree... 2021-05-17T18:04:21.9303105Z Reading state information... 2021-05-17T18:04:22.0502906Z E: Unable to locate package udunits 2021-05-17T18:04:22.1115852Z Reading package lists... 2021-05-17T18:04:22.2757466Z Building dependency tree... 2021-05-17T18:04:22.2778400Z Reading state information... 2021-05-17T18:04:22.4292913Z The following additional packages will be installed: 2021-05-17T18:04:22.4294136Z libwebpdemux2 2021-05-17T18:04:22.4737367Z The following NEW packages will be installed: 2021-05-17T18:04:22.4743696Z libwebp-dev libwebpdemux2 2021-05-17T18:04:22.4922227Z 0 upgraded, 2 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:04:22.4922996Z Need to get 277 kB of archives. 2021-05-17T18:04:22.4923717Z After this operation, 965 kB of additional disk space will be used. 2021-05-17T18:04:22.4925445Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebpdemux2 amd64 0.6.1-2 [9472 B] 2021-05-17T18:04:22.4934509Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwebp-dev amd64 0.6.1-2 [267 kB] 2021-05-17T18:04:22.8912181Z Fetched 277 kB in 0s (15.2 MB/s) 2021-05-17T18:04:22.9228042Z Selecting previously unselected package libwebpdemux2:amd64. 2021-05-17T18:04:22.9305618Z (Reading database ... 2021-05-17T18:04:22.9306373Z (Reading database ... 5% 2021-05-17T18:04:22.9307016Z (Reading 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... 100% 2021-05-17T18:04:23.0460167Z (Reading database ... 269145 files and directories currently installed.) 2021-05-17T18:04:23.0589632Z Preparing to unpack .../libwebpdemux2_0.6.1-2_amd64.deb ... 2021-05-17T18:04:23.0616605Z Unpacking libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-17T18:04:23.0840368Z Selecting previously unselected package libwebp-dev:amd64. 2021-05-17T18:04:23.1127166Z Preparing to unpack .../libwebp-dev_0.6.1-2_amd64.deb ... 2021-05-17T18:04:23.1136218Z Unpacking libwebp-dev:amd64 (0.6.1-2) ... 2021-05-17T18:04:23.2010085Z Setting up libwebpdemux2:amd64 (0.6.1-2) ... 2021-05-17T18:04:23.2035377Z Setting up libwebp-dev:amd64 (0.6.1-2) ... 2021-05-17T18:04:23.2057694Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:04:25.1896241Z Reading package lists... 2021-05-17T18:04:25.3584408Z Building dependency tree... 2021-05-17T18:04:25.3605999Z Reading state information... 2021-05-17T18:04:25.5111768Z The following additional packages will be installed: 2021-05-17T18:04:25.5114161Z gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-17T18:04:25.5115994Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-17T18:04:25.5117559Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-17T18:04:25.5120483Z Suggested packages: 2021-05-17T18:04:25.5121585Z cargo-doc gdb-doc gdbserver rust-doc rust-src 2021-05-17T18:04:25.5122444Z Recommended packages: 2021-05-17T18:04:25.5123060Z cargo 2021-05-17T18:04:25.5629419Z The following NEW packages will be installed: 2021-05-17T18:04:25.5638928Z cargo gdb libbabeltrace1 libboost-regex1.71.0 libc6-dbg libipt2 2021-05-17T18:04:25.5640321Z libsource-highlight-common libsource-highlight4v5 libstd-rust-1.47 2021-05-17T18:04:25.5646971Z libstd-rust-dev libxxhash0 rust-gdb rustc 2021-05-17T18:04:25.5982075Z 0 upgraded, 13 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:04:25.5983091Z Need to get 108 MB of archives. 2021-05-17T18:04:25.5983808Z After this operation, 501 MB of additional disk space will be used. 2021-05-17T18:04:25.5985594Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libbabeltrace1 amd64 1.5.8-1build1 [156 kB] 2021-05-17T18:04:25.6033417Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libipt2 amd64 2.0.1-1 [42.8 kB] 2021-05-17T18:04:25.6044548Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight-common all 3.1.8-1.2build5 [50.7 kB] 2021-05-17T18:04:25.6058153Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libboost-regex1.71.0 amd64 1.71.0-6ubuntu6 [471 kB] 2021-05-17T18:04:25.6151958Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsource-highlight4v5 amd64 3.1.8-1.2build5 [232 kB] 2021-05-17T18:04:25.6195838Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxxhash0 amd64 0.7.3-1 [15.3 kB] 2021-05-17T18:04:25.6210101Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-1.47 amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [59.6 MB] 2021-05-17T18:04:25.7421868Z Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal/main amd64 gdb amd64 10.2-0ubuntu1~20.04~1 [3282 kB] 2021-05-17T18:04:26.7433783Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 libstd-rust-dev amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [28.5 MB] 2021-05-17T18:04:27.3044368Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rustc amd64 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [1921 kB] 2021-05-17T18:04:27.3320978Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 cargo amd64 0.47.0-1~exp1ubuntu1~20.04.1 [3147 kB] 2021-05-17T18:04:27.3843456Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.2 [10.5 MB] 2021-05-17T18:04:27.6329567Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal-updates/universe amd64 rust-gdb all 1.47.0+dfsg1+llvm-1ubuntu1~20.04.1 [27.5 kB] 2021-05-17T18:04:28.0363486Z Fetched 108 MB in 2s (52.3 MB/s) 2021-05-17T18:04:28.0662065Z Selecting previously unselected package libbabeltrace1:amd64. 2021-05-17T18:04:28.0743513Z (Reading database ... 2021-05-17T18:04:28.0744094Z (Reading database ... 5% 2021-05-17T18:04:28.0745437Z (Reading database ... 10% 2021-05-17T18:04:28.0745946Z (Reading database ... 15% 2021-05-17T18:04:28.0746685Z (Reading database ... 20% 2021-05-17T18:04:28.0747180Z (Reading database ... 25% 2021-05-17T18:04:28.0747666Z (Reading database ... 30% 2021-05-17T18:04:28.0748146Z (Reading database ... 35% 2021-05-17T18:04:28.0748616Z (Reading database ... 40% 2021-05-17T18:04:28.0749088Z (Reading database ... 45% 2021-05-17T18:04:28.0749551Z (Reading database ... 50% 2021-05-17T18:04:28.0788149Z (Reading database ... 55% 2021-05-17T18:04:28.0831133Z (Reading database ... 60% 2021-05-17T18:04:28.0862084Z (Reading database ... 65% 2021-05-17T18:04:28.0987409Z (Reading database ... 70% 2021-05-17T18:04:28.1108028Z (Reading database ... 75% 2021-05-17T18:04:28.1134419Z (Reading database ... 80% 2021-05-17T18:04:28.1519591Z (Reading database ... 85% 2021-05-17T18:04:28.1833930Z (Reading database ... 90% 2021-05-17T18:04:28.1914250Z (Reading database ... 95% 2021-05-17T18:04:28.1914901Z (Reading database ... 100% 2021-05-17T18:04:28.1915757Z (Reading database ... 269173 files and directories currently installed.) 2021-05-17T18:04:28.2041234Z Preparing to unpack .../00-libbabeltrace1_1.5.8-1build1_amd64.deb ... 2021-05-17T18:04:28.2068012Z Unpacking libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-17T18:04:28.2540674Z Selecting previously unselected package libipt2. 2021-05-17T18:04:28.2777939Z Preparing to unpack .../01-libipt2_2.0.1-1_amd64.deb ... 2021-05-17T18:04:28.2804504Z Unpacking libipt2 (2.0.1-1) ... 2021-05-17T18:04:28.3141054Z Selecting previously unselected package libsource-highlight-common. 2021-05-17T18:04:28.3403389Z Preparing to unpack .../02-libsource-highlight-common_3.1.8-1.2build5_all.deb ... 2021-05-17T18:04:28.3435604Z Unpacking libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-17T18:04:28.3902518Z Selecting previously unselected package libboost-regex1.71.0:amd64. 2021-05-17T18:04:28.4142108Z Preparing to unpack .../03-libboost-regex1.71.0_1.71.0-6ubuntu6_amd64.deb ... 2021-05-17T18:04:28.4158682Z Unpacking libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-17T18:04:28.4901142Z Selecting previously unselected package libsource-highlight4v5. 2021-05-17T18:04:28.5151016Z Preparing to unpack .../04-libsource-highlight4v5_3.1.8-1.2build5_amd64.deb ... 2021-05-17T18:04:28.5170835Z Unpacking libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-17T18:04:28.5739883Z Selecting previously unselected package libxxhash0:amd64. 2021-05-17T18:04:28.5951858Z Preparing to unpack .../05-libxxhash0_0.7.3-1_amd64.deb ... 2021-05-17T18:04:28.5965701Z Unpacking libxxhash0:amd64 (0.7.3-1) ... 2021-05-17T18:04:28.6339872Z Selecting previously unselected package gdb. 2021-05-17T18:04:28.6564133Z Preparing to unpack .../06-gdb_10.2-0ubuntu1~20.04~1_amd64.deb ... 2021-05-17T18:04:28.6575271Z Unpacking gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-17T18:04:28.9613957Z Selecting previously unselected package libstd-rust-1.47:amd64. 2021-05-17T18:04:28.9892449Z Preparing to unpack .../07-libstd-rust-1.47_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-17T18:04:28.9921668Z Unpacking libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T18:04:34.5774659Z Selecting previously unselected package libstd-rust-dev:amd64. 2021-05-17T18:04:34.6056363Z Preparing to unpack .../08-libstd-rust-dev_1.47.0+dfsg1+llvm-1ubuntu1~20.04.1_amd64.deb ... 2021-05-17T18:04:34.6076542Z Unpacking libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T18:04:37.3861646Z Selecting previously unselected package rustc. 2021-05-17T18:04:37.4121551Z Preparing to unpack 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libstd-rust-1.47:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T18:04:39.1244777Z Setting up libsource-highlight-common (3.1.8-1.2build5) ... 2021-05-17T18:04:39.1276565Z Setting up libc6-dbg:amd64 (2.31-0ubuntu9.2) ... 2021-05-17T18:04:39.1301293Z Setting up libstd-rust-dev:amd64 (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T18:04:39.1339284Z Setting up libipt2 (2.0.1-1) ... 2021-05-17T18:04:39.1429767Z Setting up libboost-regex1.71.0:amd64 (1.71.0-6ubuntu6) ... 2021-05-17T18:04:39.1471999Z Setting up libbabeltrace1:amd64 (1.5.8-1build1) ... 2021-05-17T18:04:39.1506682Z Setting up rustc (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T18:04:39.1566786Z Setting up libxxhash0:amd64 (0.7.3-1) ... 2021-05-17T18:04:39.1606936Z Setting up libsource-highlight4v5 (3.1.8-1.2build5) ... 2021-05-17T18:04:39.1658395Z Setting up cargo (0.47.0-1~exp1ubuntu1~20.04.1) ... 2021-05-17T18:04:39.1698910Z Setting up gdb (10.2-0ubuntu1~20.04~1) ... 2021-05-17T18:04:39.1739550Z Setting up rust-gdb (1.47.0+dfsg1+llvm-1ubuntu1~20.04.1) ... 2021-05-17T18:04:39.1769665Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:04:39.1981502Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:04:42.2999627Z Reading package lists... 2021-05-17T18:04:42.4612604Z Building dependency tree... 2021-05-17T18:04:42.4631123Z Reading state information... 2021-05-17T18:04:42.6438316Z The following additional packages will be installed: 2021-05-17T18:04:42.6441701Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-17T18:04:42.6443565Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-17T18:04:42.6445234Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-17T18:04:42.6446813Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-17T18:04:42.6448439Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-17T18:04:42.6450008Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-17T18:04:42.6451467Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-17T18:04:42.6453084Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-17T18:04:42.6454754Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-17T18:04:42.6456673Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-17T18:04:42.6458370Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-17T18:04:42.6460261Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-17T18:04:42.6461993Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-17T18:04:42.6463863Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-17T18:04:42.6465695Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-17T18:04:42.6467461Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-17T18:04:42.6469137Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-17T18:04:42.6472928Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-17T18:04:42.6474528Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-17T18:04:42.6475819Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-17T18:04:42.6477077Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-17T18:04:42.6478400Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-17T18:04:42.6479658Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-17T18:04:42.6480849Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-17T18:04:42.6482059Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-17T18:04:42.6483514Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-17T18:04:42.6484966Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-17T18:04:42.6486469Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-17T18:04:42.6487979Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-17T18:04:42.6489377Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-17T18:04:42.6490744Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-17T18:04:42.6492060Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-17T18:04:42.6493657Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-17T18:04:42.6495114Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-17T18:04:42.6496670Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-17T18:04:42.6498239Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-17T18:04:42.6499889Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-17T18:04:42.6501120Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-17T18:04:42.6502327Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-17T18:04:42.6503626Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-17T18:04:42.6504933Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-17T18:04:42.6506135Z python3-webencodings qdoc-qt5 qgis-common qgis-plugin-grass 2021-05-17T18:04:42.6507352Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-17T18:04:42.6508757Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-17T18:04:42.6510226Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-17T18:04:42.6511494Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-17T18:04:42.6512724Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-17T18:04:42.6514081Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-17T18:04:42.6515225Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-17T18:04:42.6515907Z Suggested packages: 2021-05-17T18:04:42.6516865Z avahi-autoipd blt-demo libgdal-grass grass-dev grass-gui e00compr avce00 2021-05-17T18:04:42.6518033Z gnuplot gpsbabel gpstrans netpbm python3-rpy2 python3-termcolor grass 2021-05-17T18:04:42.6519408Z grass-dev-doc gvfs exiv2 geotiff-bin libgeotiff-epsg libvisual-0.4-plugins 2021-05-17T18:04:42.6520742Z libhdf4-doc libhdf4-alt-dev hdf4-tools libjs-jquery-ui-docs avahi-autoipd 2021-05-17T18:04:42.6521913Z | zeroconf ogdi-bin pcscd libqscintilla2-doc qtwayland5 2021-05-17T18:04:42.6523139Z qt5-qmltooling-plugins pinentry-doc python-cycler-doc python-future-doc 2021-05-17T18:04:42.6524421Z python3-genshi python3-lxml-dbg python-lxml-doc dvipng gir1.2-gtk-3.0 2021-05-17T18:04:42.6525726Z inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi-cairo 2021-05-17T18:04:42.6526942Z python3-gobject python3-nose python3-scipy python3-tornado 2021-05-17T18:04:42.6528186Z texlive-extra-utils texlive-latex-extra ttf-staypuft python-numpy-doc 2021-05-17T18:04:42.6529550Z python3-pytest python3-numpy-dbg owslib-doc python-pil-doc python3-pil-dbg 2021-05-17T18:04:42.6530935Z python3-pandas python3-ipykernel python-psycopg2-doc python-pyparsing-doc 2021-05-17T18:04:42.6532209Z python3-pyqt5-dbg otb-qgis saga tix python3-tk-dbg qt5-doc comgt wvdial 2021-05-17T18:04:42.6533176Z wpagui libengine-pkcs11-openssl 2021-05-17T18:04:42.7320136Z The following NEW packages will be installed: 2021-05-17T18:04:42.7324909Z avahi-daemon blt fonts-lyx gcr gdal-bin gdal-data geoclue-2.0 gnome-keyring 2021-05-17T18:04:42.7328054Z gnome-keyring-pkcs11 grass-core grass-doc gstreamer1.0-plugins-base 2021-05-17T18:04:42.7331332Z iio-sensor-proxy libarmadillo9 libarpack2 libassimp5 libavahi-core7 2021-05-17T18:04:42.7334357Z libavahi-glib1 libcdparanoia0 libcfitsio8 libcharls2 libdaemon0 libdap25 2021-05-17T18:04:42.7336956Z libdapclient6v5 libdouble-conversion3 libegl-mesa0 libegl1 libepsilon1 2021-05-17T18:04:42.7339497Z libevdev2 libexiv2-27 libfcgi-bin libfcgi0ldbl libfreexl1 libfyba0 2021-05-17T18:04:42.7340641Z libgck-1-0 libgcr-base-3-1 libgcr-ui-3-1 libgdal26 libgeos-3.8.0 2021-05-17T18:04:42.7344199Z libgeos-c1v5 libgeotiff5 libgstreamer-plugins-base1.0-0 libhdf4-0-alt 2021-05-17T18:04:42.7346808Z libhyphen0 libimagequant0 libinput-bin libinput10 libjs-jquery-ui 2021-05-17T18:04:42.7349847Z libjs-leaflet libkmlbase1 libkmldom1 libkmlengine1 liblaszip8 libmbim-glib4 2021-05-17T18:04:42.7352639Z libmbim-proxy libminizip1 libmm-glib0 libmtdev1 libnetcdf15 libnl-genl-3-200 2021-05-17T18:04:42.7355334Z libnl-route-3-200 libnss-mdns libogdi4.1 liborc-0.4-0 libpam-gnome-keyring 2021-05-17T18:04:42.7356768Z libpcsclite1 libpdal-base9 libpdal-plugin-faux libpdal-plugin-icebridge 2021-05-17T18:04:42.7358257Z libpdal-plugin-pgpointcloud libpdal-plugin-python libpdal-plugin-sqlite 2021-05-17T18:04:42.7361180Z libpdal-plugins libpdal-util9 libproj15 libqca-qt5-2 libqca-qt5-2-plugins 2021-05-17T18:04:42.7362598Z libqgis-3d3.10.4 libqgis-analysis3.10.4 libqgis-app3.10.4 libqgis-core3.10.4 2021-05-17T18:04:42.7363896Z libqgis-customwidgets libqgis-gui3.10.4 libqgis-native3.10.4 2021-05-17T18:04:42.7365227Z libqgis-server3.10.4 libqgisgrass7-3.10.4 libqgispython3.10.4 libqhull7 2021-05-17T18:04:42.7366609Z libqmi-glib5 libqmi-proxy libqscintilla2-qt5-15 libqscintilla2-qt5-l10n 2021-05-17T18:04:42.7367722Z libqt53danimation5 libqt53dcore5 libqt53dextras5 libqt53dinput5 2021-05-17T18:04:42.7368803Z libqt53dlogic5 libqt53dquickscene2d5 libqt53drender5 libqt5concurrent5 2021-05-17T18:04:42.7371142Z libqt5core5a libqt5dbus5 libqt5designer5 libqt5designercomponents5 2021-05-17T18:04:42.7372272Z libqt5gui5 libqt5help5 libqt5keychain1 libqt5network5 libqt5opengl5 2021-05-17T18:04:42.7373320Z libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5 2021-05-17T18:04:42.7374370Z libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5 2021-05-17T18:04:42.7376740Z libqt5sql5-sqlite libqt5svg5 libqt5test5 libqt5webchannel5 libqt5webkit5 2021-05-17T18:04:42.7420769Z libqt5widgets5 libqt5xml5 libqwt-qt5-6 libspatialindex6 libspatialite7 2021-05-17T18:04:42.7422170Z libsqlite3-mod-spatialite libsuperlu5 liburiparser1 libvisual-0.4-0 2021-05-17T18:04:42.7423721Z libwacom-bin libwacom-common libwacom2 libwoff1 libxcb-icccm4 libxcb-image0 2021-05-17T18:04:42.7424982Z libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-util1 2021-05-17T18:04:42.7426142Z libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxerces-c3.2 2021-05-17T18:04:42.7427285Z libxkbcommon-x11-0 libzip5 modemmanager p11-kit p11-kit-modules 2021-05-17T18:04:42.7428518Z pinentry-gnome3 proj-bin proj-data python-matplotlib-data python3-bs4 2021-05-17T18:04:42.7429778Z python3-cycler python3-dateutil python3-decorator python3-future 2021-05-17T18:04:42.7431134Z python3-gdal python3-html5lib python3-ipython-genutils python3-jupyter-core 2021-05-17T18:04:42.7432492Z python3-kiwisolver python3-lxml python3-matplotlib python3-nbformat 2021-05-17T18:04:42.7433761Z python3-numpy python3-olefile python3-owslib python3-pil python3-plotly 2021-05-17T18:04:42.7434995Z python3-psycopg2 python3-pyparsing python3-pyproj python3-pyqt5 2021-05-17T18:04:42.7436202Z python3-pyqt5.qsci python3-pyqt5.qtsql python3-pyqt5.qtsvg 2021-05-17T18:04:42.7437488Z python3-pyqt5.qtwebkit python3-qgis python3-qgis-common python3-retrying 2021-05-17T18:04:42.7439324Z python3-sip python3-soupsieve python3-tk python3-traitlets python3-tz 2021-05-17T18:04:42.7440554Z python3-webencodings qdoc-qt5 qgis qgis-common qgis-plugin-grass 2021-05-17T18:04:42.7441778Z qgis-plugin-grass-common qgis-provider-grass qgis-providers 2021-05-17T18:04:42.7443201Z qgis-providers-common qhelpgenerator-qt5 qt3d-assimpsceneimport-plugin 2021-05-17T18:04:42.7444659Z qt3d-defaultgeometryloader-plugin qt3d-gltfsceneio-plugin 2021-05-17T18:04:42.7445931Z qt3d-scene2d-plugin qt5-assistant qt5-gtk-platformtheme 2021-05-17T18:04:42.7447172Z qt5-image-formats-plugins qtattributionsscanner-qt5 qtchooser 2021-05-17T18:04:42.7448521Z qttools5-dev-tools qttranslations5-l10n tk8.6-blt2.5 ttf-bitstream-vera 2021-05-17T18:04:42.7449686Z usb-modeswitch usb-modeswitch-data wpasupplicant 2021-05-17T18:04:42.7612014Z 0 upgraded, 214 newly installed, 0 to remove and 30 not upgraded. 2021-05-17T18:04:42.7612721Z Need to get 183 MB of archives. 2021-05-17T18:04:42.7613619Z After this operation, 776 MB of additional disk space will be used. 2021-05-17T18:04:42.7615371Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdouble-conversion3 amd64 3.1.5-4ubuntu1 [37.9 kB] 2021-05-17T18:04:42.7639664Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5core5a amd64 5.12.8+dfsg-0ubuntu1 [2005 kB] 2021-05-17T18:04:42.7854491Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl-mesa0 amd64 20.2.6-0ubuntu0.20.04.1 [97.7 kB] 2021-05-17T18:04:42.7870390Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libegl1 amd64 1.3.2-1~ubuntu0.20.04.1 [31.9 kB] 2021-05-17T18:04:42.7878552Z Get:5 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libevdev2 amd64 1.9.0+dfsg-1ubuntu0.1 [31.6 kB] 2021-05-17T18:04:42.7885988Z Get:6 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmtdev1 amd64 1.1.5-1.1 [14.2 kB] 2021-05-17T18:04:42.7893288Z Get:7 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-common all 1.3-2ubuntu3 [45.3 kB] 2021-05-17T18:04:42.7902587Z Get:8 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom2 amd64 1.3-2ubuntu3 [20.0 kB] 2021-05-17T18:04:42.7911153Z Get:9 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput-bin amd64 1.15.5-1ubuntu0.2 [19.1 kB] 2021-05-17T18:04:42.7916916Z Get:10 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libinput10 amd64 1.15.5-1ubuntu0.2 [112 kB] 2021-05-17T18:04:42.7933190Z Get:11 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5dbus5 amd64 5.12.8+dfsg-0ubuntu1 [208 kB] 2021-05-17T18:04:42.7953926Z Get:12 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5network5 amd64 5.12.8+dfsg-0ubuntu1 [674 kB] 2021-05-17T18:04:42.8008425Z Get:13 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [10.8 kB] 2021-05-17T18:04:42.8011722Z Get:14 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-util1 amd64 0.4.0-0ubuntu3 [11.2 kB] 2021-05-17T18:04:42.8019554Z Get:15 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-image0 amd64 0.4.0-1build1 [12.3 kB] 2021-05-17T18:04:42.8026059Z Get:16 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-keysyms1 amd64 0.4.0-1build1 [8452 B] 2021-05-17T18:04:42.8031049Z Get:17 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-randr0 amd64 1.14-2 [16.3 kB] 2021-05-17T18:04:42.8038264Z Get:18 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-render-util0 amd64 0.3.9-1build1 [9912 B] 2021-05-17T18:04:42.8044024Z Get:19 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinerama0 amd64 1.14-2 [5260 B] 2021-05-17T18:04:42.8049199Z Get:20 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xinput0 amd64 1.14-2 [29.3 kB] 2021-05-17T18:04:42.8056737Z Get:21 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxcb-xkb1 amd64 1.14-2 [29.6 kB] 2021-05-17T18:04:42.8065180Z Get:22 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libxkbcommon-x11-0 amd64 0.10.0-1 [13.4 kB] 2021-05-17T18:04:42.8070726Z Get:23 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5gui5 amd64 5.12.8+dfsg-0ubuntu1 [2971 kB] 2021-05-17T18:04:42.8292305Z Get:24 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5widgets5 amd64 5.12.8+dfsg-0ubuntu1 [2293 kB] 2021-05-17T18:04:42.8464773Z Get:25 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5svg5 amd64 5.12.8-0ubuntu1 [131 kB] 2021-05-17T18:04:42.8480153Z Get:26 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 liborc-0.4-0 amd64 1:0.4.31-1 [188 kB] 2021-05-17T18:04:42.8498359Z Get:27 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.16.2-4 [735 kB] 2021-05-17T18:04:42.8557971Z Get:28 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libhyphen0 amd64 2.8.8-7 [27.0 kB] 2021-05-17T18:04:42.8565708Z Get:29 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5positioning5 amd64 5.12.8+dfsg-0ubuntu1 [197 kB] 2021-05-17T18:04:42.8585678Z Get:30 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5printsupport5 amd64 5.12.8+dfsg-0ubuntu1 [193 kB] 2021-05-17T18:04:42.8605908Z Get:31 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5qml5 amd64 5.12.8-0ubuntu1 [1438 kB] 2021-05-17T18:04:42.8714615Z Get:32 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quick5 amd64 5.12.8-0ubuntu1 [1335 kB] 2021-05-17T18:04:42.8816161Z Get:33 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sensors5 amd64 5.12.8-0ubuntu1 [114 kB] 2021-05-17T18:04:42.8829078Z Get:34 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webchannel5 amd64 5.12.8-0ubuntu1 [51.2 kB] 2021-05-17T18:04:42.8941771Z Get:35 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libwoff1 amd64 1.0.2-1build2 [42.0 kB] 2021-05-17T18:04:42.8949997Z Get:36 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5webkit5 amd64 5.212.0~alpha4-1ubuntu2 [12.1 MB] 2021-05-17T18:04:42.9837255Z Get:37 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-image-formats-plugins amd64 5.12.8-0ubuntu1 [43.4 kB] 2021-05-17T18:04:42.9843440Z Get:38 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers-common all 3.10.4+dfsg-1ubuntu2 [897 kB] 2021-05-17T18:04:42.9957925Z Get:39 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2 amd64 2.2.1-2build1 [307 kB] 2021-05-17T18:04:43.0060678Z Get:40 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqca-qt5-2-plugins amd64 2.2.1-2build1 [191 kB] 2021-05-17T18:04:43.0162766Z Get:41 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5 amd64 5.12.8+dfsg-0ubuntu1 [121 kB] 2021-05-17T18:04:43.0251668Z Get:42 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5sql5-sqlite amd64 5.12.8+dfsg-0ubuntu1 [47.5 kB] 2021-05-17T18:04:43.0306684Z Get:43 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB] 2021-05-17T18:04:43.0428897Z Get:44 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB] 2021-05-17T18:04:43.0452964Z Get:45 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB] 2021-05-17T18:04:43.0473530Z Get:46 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB] 2021-05-17T18:04:43.0489465Z Get:47 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB] 2021-05-17T18:04:43.0537036Z Get:48 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB] 2021-05-17T18:04:43.0547092Z Get:49 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB] 2021-05-17T18:04:43.0581925Z Get:50 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB] 2021-05-17T18:04:43.0592762Z Get:51 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB] 2021-05-17T18:04:43.0598149Z Get:52 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB] 2021-05-17T18:04:43.0604950Z Get:53 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB] 2021-05-17T18:04:43.0616127Z Get:54 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB] 2021-05-17T18:04:43.0661165Z Get:55 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB] 2021-05-17T18:04:43.0668443Z Get:56 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7647 kB] 2021-05-17T18:04:43.1223183Z Get:57 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB] 2021-05-17T18:04:43.1295680Z Get:58 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB] 2021-05-17T18:04:43.1301393Z Get:59 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB] 2021-05-17T18:04:43.1324691Z Get:60 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB] 2021-05-17T18:04:43.1329990Z Get:61 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB] 2021-05-17T18:04:43.1335325Z Get:62 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB] 2021-05-17T18:04:43.1343328Z Get:63 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB] 2021-05-17T18:04:43.1358157Z Get:64 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB] 2021-05-17T18:04:43.1366693Z Get:65 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB] 2021-05-17T18:04:43.1395663Z Get:66 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB] 2021-05-17T18:04:43.1413887Z Get:67 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB] 2021-05-17T18:04:43.1428442Z Get:68 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1286 kB] 2021-05-17T18:04:43.1525552Z Get:69 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB] 2021-05-17T18:04:43.1741891Z Get:70 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6156 kB] 2021-05-17T18:04:43.2186917Z Get:71 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5concurrent5 amd64 5.12.8+dfsg-0ubuntu1 [33.5 kB] 2021-05-17T18:04:43.2193324Z Get:72 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5keychain1 amd64 0.10.0-1build1 [48.4 kB] 2021-05-17T18:04:43.2204276Z Get:73 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5serialport5 amd64 5.12.8-0ubuntu1 [33.1 kB] 2021-05-17T18:04:43.2210295Z Get:74 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5xml5 amd64 5.12.8+dfsg-0ubuntu1 [105 kB] 2021-05-17T18:04:43.2221187Z Get:75 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libspatialindex6 amd64 1.9.3-1build1 [266 kB] 2021-05-17T18:04:43.2243173Z Get:76 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libzip5 amd64 1.5.1-0ubuntu1 [46.7 kB] 2021-05-17T18:04:43.2251006Z Get:77 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-core3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [5216 kB] 2021-05-17T18:04:43.3852451Z Get:78 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-native3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [44.5 kB] 2021-05-17T18:04:43.3859808Z Get:79 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-l10n all 2.11.2+dfsg-6 [41.3 kB] 2021-05-17T18:04:43.3867723Z Get:80 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqscintilla2-qt5-15 amd64 2.11.2+dfsg-6 [1238 kB] 2021-05-17T18:04:43.4292209Z Get:81 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5quickwidgets5 amd64 5.12.8-0ubuntu1 [39.8 kB] 2021-05-17T18:04:43.4301091Z Get:82 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5opengl5 amd64 5.12.8+dfsg-0ubuntu1 [136 kB] 2021-05-17T18:04:43.4315069Z Get:83 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqwt-qt5-6 amd64 6.1.4-1.1build1 [427 kB] 2021-05-17T18:04:43.4502538Z Get:84 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-gui3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3195 kB] 2021-05-17T18:04:43.5589353Z Get:85 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-providers amd64 3.10.4+dfsg-1ubuntu2 [1940 kB] 2021-05-17T18:04:43.6328694Z Get:86 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-core7 amd64 0.7-4ubuntu7 [81.7 kB] 2021-05-17T18:04:43.6340581Z Get:87 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libdaemon0 amd64 0.14-7 [13.9 kB] 2021-05-17T18:04:43.6347690Z Get:88 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 avahi-daemon amd64 0.7-4ubuntu7 [61.0 kB] 2021-05-17T18:04:43.6355318Z Get:89 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4 [572 kB] 2021-05-17T18:04:43.6402274Z Get:90 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 blt amd64 2.5.3+dfsg-4 [4944 B] 2021-05-17T18:04:43.6408797Z Get:91 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 fonts-lyx all 2.3.4.2-2 [154 kB] 2021-05-17T18:04:43.6423642Z Get:92 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgck-1-0 amd64 3.36.0-2build1 [75.5 kB] 2021-05-17T18:04:43.6433756Z Get:93 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-base-3-1 amd64 3.36.0-2build1 [193 kB] 2021-05-17T18:04:43.6452292Z Get:94 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libgcr-ui-3-1 amd64 3.36.0-2build1 [127 kB] 2021-05-17T18:04:43.6466125Z Get:95 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gcr amd64 3.36.0-2build1 [63.9 kB] 2021-05-17T18:04:43.6474753Z Get:96 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2725 kB] 2021-05-17T18:04:43.6768106Z Get:97 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB] 2021-05-17T18:04:43.6816000Z Get:98 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB] 2021-05-17T18:04:43.6842391Z Get:99 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libavahi-glib1 amd64 0.7-4ubuntu7 [7804 B] 2021-05-17T18:04:43.6857795Z Get:100 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmm-glib0 amd64 1.12.8-1 [185 kB] 2021-05-17T18:04:43.6882015Z Get:101 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 geoclue-2.0 amd64 2.5.6-0ubuntu1 [91.9 kB] 2021-05-17T18:04:43.6925621Z Get:102 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit-modules amd64 0.23.20-1ubuntu0.1 [231 kB] 2021-05-17T18:04:43.6989238Z Get:103 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 p11-kit amd64 0.23.20-1ubuntu0.1 [93.8 kB] 2021-05-17T18:04:43.7010569Z Get:104 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 pinentry-gnome3 amd64 1.1.0-3build1 [38.6 kB] 2021-05-17T18:04:43.7024155Z Get:105 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring amd64 3.36.0-1ubuntu1 [613 kB] 2021-05-17T18:04:43.7130998Z Get:106 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gnome-keyring-pkcs11 amd64 3.36.0-1ubuntu1 [28.0 kB] 2021-05-17T18:04:43.7137438Z Get:107 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-doc all 7.8.2-1build3 [32.4 MB] 2021-05-17T18:04:44.5219930Z Get:108 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 liblaszip8 amd64 3.4.3-1build1 [125 kB] 2021-05-17T18:04:44.5233484Z Get:109 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-util9 amd64 2.0.1+ds-1build3 [68.5 kB] 2021-05-17T18:04:44.5242881Z Get:110 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-base9 amd64 2.0.1+ds-1build3 [1739 kB] 2021-05-17T18:04:44.5552175Z Get:111 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 grass-core amd64 7.8.2-1build3 [5737 kB] 2021-05-17T18:04:44.6520454Z Get:112 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libcdparanoia0 amd64 3.10.2+debian-13 [46.7 kB] 2021-05-17T18:04:44.6525151Z Get:113 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libvisual-0.4-0 amd64 0.4.0-17 [99.8 kB] 2021-05-17T18:04:44.6560004Z Get:114 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 gstreamer1.0-plugins-base amd64 1.16.2-4 [619 kB] 2021-05-17T18:04:44.6618298Z Get:115 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 iio-sensor-proxy amd64 2.8-1ubuntu1 [35.8 kB] 2021-05-17T18:04:44.6630031Z Get:116 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libassimp5 amd64 5.0.1~ds0-1build1 [2775 kB] 2021-05-17T18:04:44.7173008Z Get:117 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libexiv2-27 amd64 0.27.2-8ubuntu2.2 [788 kB] 2021-05-17T18:04:44.7311074Z Get:118 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi0ldbl amd64 2.4.0-10build1 [155 kB] 2021-05-17T18:04:44.7342373Z Get:119 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libfcgi-bin amd64 2.4.0-10build1 [10.5 kB] 2021-05-17T18:04:44.7347175Z Get:120 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libimagequant0 amd64 2.12.2-1.1 [31.4 kB] 2021-05-17T18:04:44.7357846Z Get:121 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] 2021-05-17T18:04:44.7426076Z Get:122 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-glib4 amd64 1.22.0-2 [101 kB] 2021-05-17T18:04:44.7436648Z Get:123 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libmbim-proxy amd64 1.22.0-2 [5908 B] 2021-05-17T18:04:44.7440537Z Get:124 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-genl-3-200 amd64 3.4.0-1 [11.1 kB] 2021-05-17T18:04:44.7445810Z Get:125 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnl-route-3-200 amd64 3.4.0-1 [149 kB] 2021-05-17T18:04:44.7467243Z Get:126 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libnss-mdns amd64 0.14.1-1ubuntu1 [22.9 kB] 2021-05-17T18:04:44.7478304Z Get:127 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpam-gnome-keyring amd64 3.36.0-1ubuntu1 [23.3 kB] 2021-05-17T18:04:44.7488999Z Get:128 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libpcsclite1 amd64 1.8.26-3 [22.0 kB] 2021-05-17T18:04:44.7495222Z Get:129 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-faux amd64 2.0.1+ds-1build3 [27.3 kB] 2021-05-17T18:04:44.7502046Z Get:130 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-icebridge amd64 2.0.1+ds-1build3 [42.8 kB] 2021-05-17T18:04:44.7515615Z Get:131 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-pgpointcloud amd64 2.0.1+ds-1build3 [75.3 kB] 2021-05-17T18:04:44.7529383Z Get:132 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-python amd64 2.0.1+ds-1build3 [136 kB] 2021-05-17T18:04:44.7550526Z Get:133 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libsqlite3-mod-spatialite amd64 4.3.0a-6build1 [1265 kB] 2021-05-17T18:04:44.7841157Z Get:134 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugin-sqlite amd64 2.0.1+ds-1build3 [89.5 kB] 2021-05-17T18:04:44.7866799Z Get:135 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libpdal-plugins amd64 2.0.1+ds-1build3 [12.9 kB] 2021-05-17T18:04:44.7873160Z Get:136 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dcore5 amd64 5.12.8+dfsg-0ubuntu1 [137 kB] 2021-05-17T18:04:44.7911403Z Get:137 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53drender5 amd64 5.12.8+dfsg-0ubuntu1 [689 kB] 2021-05-17T18:04:44.8143730Z Get:138 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53danimation5 amd64 5.12.8+dfsg-0ubuntu1 [159 kB] 2021-05-17T18:04:44.8197171Z Get:139 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dinput5 amd64 5.12.8+dfsg-0ubuntu1 [125 kB] 2021-05-17T18:04:44.8236595Z Get:140 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dlogic5 amd64 5.12.8+dfsg-0ubuntu1 [25.9 kB] 2021-05-17T18:04:44.8247003Z Get:141 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dextras5 amd64 5.12.8+dfsg-0ubuntu1 [157 kB] 2021-05-17T18:04:44.8299960Z Get:142 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-assimpsceneimport-plugin amd64 5.12.8+dfsg-0ubuntu1 [45.2 kB] 2021-05-17T18:04:44.8320676Z Get:143 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-defaultgeometryloader-plugin amd64 5.12.8+dfsg-0ubuntu1 [33.3 kB] 2021-05-17T18:04:44.8334101Z Get:144 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-gltfsceneio-plugin amd64 5.12.8+dfsg-0ubuntu1 [110 kB] 2021-05-17T18:04:44.8373657Z Get:145 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt53dquickscene2d5 amd64 5.12.8+dfsg-0ubuntu1 [38.4 kB] 2021-05-17T18:04:44.8394627Z Get:146 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt3d-scene2d-plugin amd64 5.12.8+dfsg-0ubuntu1 [17.1 kB] 2021-05-17T18:04:44.8420180Z Get:147 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-3d3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [224 kB] 2021-05-17T18:04:44.8490369Z Get:148 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-analysis3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [927 kB] 2021-05-17T18:04:44.8756402Z Get:149 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-app3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [3060 kB] 2021-05-17T18:04:44.9362476Z Get:150 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtchooser amd64 66-2build1 [24.7 kB] 2021-05-17T18:04:44.9367074Z Get:151 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qdoc-qt5 amd64 5.12.8-0ubuntu1 [507 kB] 2021-05-17T18:04:44.9477812Z Get:152 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5help5 amd64 5.12.8-0ubuntu1 [134 kB] 2021-05-17T18:04:44.9502263Z Get:153 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qhelpgenerator-qt5 amd64 5.12.8-0ubuntu1 [64.3 kB] 2021-05-17T18:04:44.9517543Z Get:154 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-assistant amd64 5.12.8-0ubuntu1 [369 kB] 2021-05-17T18:04:44.9579609Z Get:155 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qtattributionsscanner-qt5 amd64 5.12.8-0ubuntu1 [26.0 kB] 2021-05-17T18:04:44.9592714Z Get:156 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designer5 amd64 5.12.8-0ubuntu1 [2778 kB] 2021-05-17T18:04:45.0157700Z Get:157 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5designercomponents5 amd64 5.12.8-0ubuntu1 [718 kB] 2021-05-17T18:04:45.0288985Z Get:158 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttools5-dev-tools amd64 5.12.8-0ubuntu1 [1031 kB] 2021-05-17T18:04:45.0486768Z Get:159 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-customwidgets amd64 3.10.4+dfsg-1ubuntu2 [3397 kB] 2021-05-17T18:04:45.1140247Z Get:160 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgis-server3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [311 kB] 2021-05-17T18:04:45.1186493Z Get:161 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgisgrass7-3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [228 kB] 2021-05-17T18:04:45.1250222Z Get:162 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqgispython3.10.4 amd64 3.10.4+dfsg-1ubuntu2 [43.1 kB] 2021-05-17T18:04:45.1266439Z Get:163 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-glib5 amd64 1.24.8-1 [529 kB] 2021-05-17T18:04:45.1357874Z Get:164 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 libqmi-proxy amd64 1.24.8-1 [5856 B] 2021-05-17T18:04:45.1362711Z Get:165 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libqt5test5 amd64 5.12.8+dfsg-0ubuntu1 [131 kB] 2021-05-17T18:04:45.1411422Z Get:166 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libwacom-bin amd64 1.3-2ubuntu3 [5484 B] 2021-05-17T18:04:45.1413352Z Get:167 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 modemmanager amd64 1.12.8-1 [755 kB] 2021-05-17T18:04:45.1565172Z Get:168 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 ttf-bitstream-vera all 1.10-8 [352 kB] 2021-05-17T18:04:45.1648218Z Get:169 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python-matplotlib-data all 3.1.2-1ubuntu4 [3788 kB] 2021-05-17T18:04:45.2455690Z Get:170 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-soupsieve all 1.9.5+dfsg-1 [29.1 kB] 2021-05-17T18:04:45.2460465Z Get:171 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-bs4 all 4.8.2-1 [83.0 kB] 2021-05-17T18:04:45.2485956Z Get:172 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-cycler all 0.10.0-3 [8132 B] 2021-05-17T18:04:45.2495840Z Get:173 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-dateutil all 2.7.3-3ubuntu1 [63.3 kB] 2021-05-17T18:04:45.2509010Z Get:174 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB] 2021-05-17T18:04:45.2518973Z Get:175 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-future all 0.18.2-2 [336 kB] 2021-05-17T18:04:45.2578655Z Get:176 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-webencodings all 0.5.1-1ubuntu1 [11.0 kB] 2021-05-17T18:04:45.2583933Z Get:177 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-html5lib all 1.0.1-2 [84.3 kB] 2021-05-17T18:04:45.2600667Z Get:178 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-ipython-genutils all 0.2.0-1ubuntu1 [21.1 kB] 2021-05-17T18:04:45.2606064Z Get:179 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-traitlets all 4.3.3-3 [59.9 kB] 2021-05-17T18:04:45.2617766Z Get:180 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-jupyter-core all 4.6.3-3 [41.2 kB] 2021-05-17T18:04:45.2627268Z Get:181 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-kiwisolver amd64 1.0.1-3build1 [61.3 kB] 2021-05-17T18:04:45.2644456Z Get:182 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-lxml amd64 4.5.0-1ubuntu0.3 [1382 kB] 2021-05-17T18:04:45.2911310Z Get:183 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-pyparsing all 2.4.6-1 [61.3 kB] 2021-05-17T18:04:45.2920669Z Get:184 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-matplotlib amd64 3.1.2-1ubuntu4 [4459 kB] 2021-05-17T18:04:45.3716850Z Get:185 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-nbformat all 5.0.4-1 [29.8 kB] 2021-05-17T18:04:45.3726089Z Get:186 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-olefile all 0.46-2 [33.7 kB] 2021-05-17T18:04:45.3732577Z Get:187 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyproj amd64 2.5.0+ds-1 [297 kB] 2021-05-17T18:04:45.3782806Z Get:188 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-tz all 2019.3-1 [24.4 kB] 2021-05-17T18:04:45.3793478Z Get:189 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-owslib all 0.19.1-1 [115 kB] 2021-05-17T18:04:45.3822041Z Get:190 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-pil amd64 7.0.0-4ubuntu0.3 [363 kB] 2021-05-17T18:04:45.3881609Z Get:191 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-retrying all 1.3.3-4 [8160 B] 2021-05-17T18:04:45.3887519Z Get:192 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-plotly all 4.4.1+dfsg-1 [1960 kB] 2021-05-17T18:04:45.4197233Z Get:193 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 python3-psycopg2 amd64 2.8.4-2 [112 kB] 2021-05-17T18:04:45.4217121Z Get:194 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-sip amd64 4.19.21+dfsg-1build1 [87.9 kB] 2021-05-17T18:04:45.4233914Z Get:195 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5 amd64 5.14.1+dfsg-3build1 [2318 kB] 2021-05-17T18:04:45.4698289Z Get:196 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qsci amd64 2.11.2+dfsg-6 [230 kB] 2021-05-17T18:04:45.4743356Z Get:197 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsql amd64 5.14.1+dfsg-3build1 [87.5 kB] 2021-05-17T18:04:45.4768320Z Get:198 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtsvg amd64 5.14.1+dfsg-3build1 [26.9 kB] 2021-05-17T18:04:45.4776599Z Get:199 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-pyqt5.qtwebkit amd64 5.14.1+dfsg-3build1 [103 kB] 2021-05-17T18:04:45.4795390Z Get:200 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis-common all 3.10.4+dfsg-1ubuntu2 [2390 kB] 2021-05-17T18:04:45.5205661Z Get:201 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 python3-qgis amd64 3.10.4+dfsg-1ubuntu2 [7772 kB] 2021-05-17T18:04:45.6702019Z Get:202 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 python3-tk amd64 3.8.5-1~20.04.1 [103 kB] 2021-05-17T18:04:45.6737446Z Get:203 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libjs-leaflet all 1.6.0~dfsg-1 [313 kB] 2021-05-17T18:04:45.6844014Z Get:204 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-common all 3.10.4+dfsg-1ubuntu2 [16.7 MB] 2021-05-17T18:04:46.0995429Z Get:205 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis amd64 3.10.4+dfsg-1ubuntu2 [4788 kB] 2021-05-17T18:04:46.2079222Z Get:206 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass-common all 3.10.4+dfsg-1ubuntu2 [463 kB] 2021-05-17T18:04:46.2159055Z Get:207 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-provider-grass amd64 3.10.4+dfsg-1ubuntu2 [92.3 kB] 2021-05-17T18:04:46.2178187Z Get:208 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qgis-plugin-grass amd64 3.10.4+dfsg-1ubuntu2 [601 kB] 2021-05-17T18:04:46.2270052Z Get:209 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qt5-gtk-platformtheme amd64 5.12.8+dfsg-0ubuntu1 [124 kB] 2021-05-17T18:04:46.2282357Z Get:210 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 qttranslations5-l10n all 5.12.8-0ubuntu1 [1486 kB] 2021-05-17T18:04:46.2429284Z Get:211 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 wpasupplicant amd64 2:2.9-1ubuntu4.3 [1183 kB] 2021-05-17T18:04:46.2550570Z Get:212 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB] 2021-05-17T18:04:46.2558332Z Get:213 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch-data all 20191128-3 [32.3 kB] 2021-05-17T18:04:46.2562396Z Get:214 http://azure.archive.ubuntu.com/ubuntu focal/main amd64 usb-modeswitch amd64 2.5.2+repack0-2ubuntu3 [53.1 kB] 2021-05-17T18:04:47.2957393Z Fetched 183 MB in 4s (52.1 MB/s) 2021-05-17T18:04:47.3294417Z Selecting previously unselected package libdouble-conversion3:amd64. 2021-05-17T18:04:47.3372178Z (Reading database ... 2021-05-17T18:04:47.3373117Z (Reading database ... 5% 2021-05-17T18:04:47.3373813Z (Reading database ... 10% 2021-05-17T18:04:47.3374491Z (Reading database ... 15% 2021-05-17T18:04:47.3375154Z (Reading database ... 20% 2021-05-17T18:04:47.3375799Z (Reading database ... 25% 2021-05-17T18:04:47.3376454Z (Reading database ... 30% 2021-05-17T18:04:47.3377107Z (Reading database ... 35% 2021-05-17T18:04:47.3377751Z (Reading database ... 40% 2021-05-17T18:04:47.3378402Z (Reading database ... 45% 2021-05-17T18:04:47.3379698Z (Reading database ... 50% 2021-05-17T18:04:47.3402008Z (Reading database ... 55% 2021-05-17T18:04:47.3447601Z (Reading database ... 60% 2021-05-17T18:04:47.3481542Z (Reading database ... 65% 2021-05-17T18:04:47.3611486Z (Reading database ... 70% 2021-05-17T18:04:47.3729947Z (Reading database ... 75% 2021-05-17T18:04:47.3756227Z (Reading database ... 80% 2021-05-17T18:04:47.4135203Z (Reading database ... 85% 2021-05-17T18:04:47.4434728Z (Reading database ... 90% 2021-05-17T18:04:47.4512575Z (Reading database ... 95% 2021-05-17T18:04:47.4513201Z (Reading database ... 100% 2021-05-17T18:04:47.4514099Z (Reading database ... 269928 files and directories currently installed.) 2021-05-17T18:04:47.4638189Z Preparing to unpack .../000-libdouble-conversion3_3.1.5-4ubuntu1_amd64.deb ... 2021-05-17T18:04:47.4655521Z Unpacking libdouble-conversion3:amd64 (3.1.5-4ubuntu1) ... 2021-05-17T18:04:47.4993321Z Selecting previously unselected package libqt5core5a:amd64. 2021-05-17T18:04:47.5246688Z Preparing to unpack .../001-libqt5core5a_5.12.8+dfsg-0ubuntu1_amd64.deb ... 2021-05-17T18:04:47.5332482Z Unpacking libqt5core5a:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:04:47.7060966Z Selecting previously unselected package libegl-mesa0:amd64. 2021-05-17T18:04:47.7320343Z Preparing to unpack .../002-libegl-mesa0_20.2.6-0ubuntu0.20.04.1_amd64.deb ... 2021-05-17T18:04:47.7330231Z Unpacking libegl-mesa0:amd64 (20.2.6-0ubuntu0.20.04.1) ... 2021-05-17T18:04:47.7659788Z Selecting previously unselected package libegl1:amd64. 2021-05-17T18:04:47.7911859Z Preparing to unpack .../003-libegl1_1.3.2-1~ubuntu0.20.04.1_amd64.deb ... 2021-05-17T18:04:47.7921897Z Unpacking libegl1:amd64 (1.3.2-1~ubuntu0.20.04.1) ... 2021-05-17T18:04:47.8220215Z Selecting previously unselected package libevdev2:amd64. 2021-05-17T18:04:47.8468288Z Preparing to unpack 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(0.7-4ubuntu7) ... 2021-05-17T18:05:20.4576096Z Setting up libqca-qt5-2:amd64 (2.2.1-2build1) ... 2021-05-17T18:05:20.4626324Z Setting up python-matplotlib-data (3.1.2-1ubuntu4) ... 2021-05-17T18:05:20.4695484Z Setting up libgcr-base-3-1:amd64 (3.36.0-2build1) ... 2021-05-17T18:05:20.4781287Z Setting up libevdev2:amd64 (1.9.0+dfsg-1ubuntu0.1) ... 2021-05-17T18:05:20.4829760Z Setting up libqt5concurrent5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:20.4900277Z Setting up libpam-gnome-keyring:amd64 (3.36.0-1ubuntu1) ... 2021-05-17T18:05:20.6968815Z Setting up python3-soupsieve (1.9.5+dfsg-1) ... 2021-05-17T18:05:20.8519356Z Setting up python3-jupyter-core (4.6.3-3) ... 2021-05-17T18:05:21.0055821Z Setting up libmbim-glib4:amd64 (1.22.0-2) ... 2021-05-17T18:05:21.0108017Z Setting up qtchooser (66-2build1) ... 2021-05-17T18:05:21.0153790Z Setting up libwacom-common (1.3-2ubuntu3) ... 2021-05-17T18:05:21.0204233Z Setting up python3-sip (4.19.21+dfsg-1build1) ... 2021-05-17T18:05:21.1757657Z Setting up libkmldom1:amd64 (1.3.0-8build1) ... 2021-05-17T18:05:21.1821215Z Setting up libspatialite7:amd64 (4.3.0a-6build1) ... 2021-05-17T18:05:21.1851399Z Setting up libgcr-ui-3-1:amd64 (3.36.0-2build1) ... 2021-05-17T18:05:21.1903916Z Setting up python3-matplotlib (3.1.2-1ubuntu4) ... 2021-05-17T18:05:22.0991568Z Setting up libkmlengine1:amd64 (1.3.0-8build1) ... 2021-05-17T18:05:22.1016891Z Setting up libqt5keychain1:amd64 (0.10.0-1build1) ... 2021-05-17T18:05:22.1037876Z Setting up libsqlite3-mod-spatialite:amd64 (4.3.0a-6build1) ... 2021-05-17T18:05:22.1060229Z Setting up qdoc-qt5 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:22.1082063Z Setting up libqt5positioning5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:22.1106783Z Setting up proj-bin (6.3.1-1) ... 2021-05-17T18:05:22.1127213Z Setting up libqca-qt5-2-plugins:amd64 (2.2.1-2build1) ... 2021-05-17T18:05:22.1147320Z Setting up libgstreamer-plugins-base1.0-0:amd64 (1.16.2-4) ... 2021-05-17T18:05:22.1167823Z Setting up geoclue-2.0 (2.5.6-0ubuntu1) ... 2021-05-17T18:05:22.5001217Z geoclue.service is a disabled or a static unit, not starting it. 2021-05-17T18:05:22.5020794Z Setting up libqt5serialport5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:22.5043113Z Setting up python3-nbformat (5.0.4-1) ... 2021-05-17T18:05:22.6673331Z Setting up libmbim-proxy (1.22.0-2) ... 2021-05-17T18:05:22.6707096Z Setting up python3-pyproj (2.5.0+ds-1) ... 2021-05-17T18:05:22.8255236Z Setting up libqt5network5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:22.8279975Z Setting up python3-bs4 (4.8.2-1) ... 2021-05-17T18:05:23.0110119Z Setting up libgeotiff5:amd64 (1.5.1-2) ... 2021-05-17T18:05:23.0155587Z Setting up gcr (3.36.0-2build1) ... 2021-05-17T18:05:23.0186553Z Setting up libqt5sql5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:23.0207611Z Setting up wpasupplicant (2:2.9-1ubuntu4.3) ... 2021-05-17T18:05:23.1625196Z Created symlink /etc/systemd/system/dbus-fi.w1.wpa_supplicant1.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-17T18:05:23.1628052Z Created symlink /etc/systemd/system/multi-user.target.wants/wpa_supplicant.service → /lib/systemd/system/wpa_supplicant.service. 2021-05-17T18:05:23.6571552Z Setting up python3-pil:amd64 (7.0.0-4ubuntu0.3) ... 2021-05-17T18:05:23.9182962Z Setting up libqt5xml5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:23.9215246Z Setting up gstreamer1.0-plugins-base:amd64 (1.16.2-4) ... 2021-05-17T18:05:23.9254640Z Setting up libqt5qml5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:23.9287804Z Setting up qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:05:23.9312984Z Setting up qtattributionsscanner-qt5 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:23.9358108Z Setting up libqt5webchannel5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:23.9392298Z Setting up python3-plotly (4.4.1+dfsg-1) ... 2021-05-17T18:05:24.0911385Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:24.0914394Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-17T18:05:24.0918364Z /usr/lib/python3/dist-packages/_plotly_utils/utils.py:214: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:24.0919811Z if (iso_string.split("-")[:3] is "00:00") or (iso_string.split("+")[0] is "00:00"): 2021-05-17T18:05:24.1310513Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:194: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:24.1311986Z if direction is "increasing": 2021-05-17T18:05:24.1313521Z /usr/lib/python3/dist-packages/plotly/figure_factory/_candlestick.py:199: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:24.1314642Z elif direction is "decreasing": 2021-05-17T18:05:24.1480647Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:176: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:24.1482069Z if direction is "increasing": 2021-05-17T18:05:24.1484211Z /usr/lib/python3/dist-packages/plotly/figure_factory/_ohlc.py:179: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:24.1485260Z elif direction is "decreasing": 2021-05-17T18:05:25.0342543Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:460: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:25.0344250Z if props["offset_coordinates"] is "data": 2021-05-17T18:05:25.0346143Z /usr/lib/python3/dist-packages/plotly/matplotlylib/renderer.py:572: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-17T18:05:25.0347462Z if props["coordinates"] is not "data": 2021-05-17T18:05:25.7739733Z Setting up avahi-daemon (0.7-4ubuntu7) ... 2021-05-17T18:05:26.3022378Z Created symlink /etc/systemd/system/dbus-org.freedesktop.Avahi.service → /lib/systemd/system/avahi-daemon.service. 2021-05-17T18:05:26.3024787Z Created symlink /etc/systemd/system/multi-user.target.wants/avahi-daemon.service → /lib/systemd/system/avahi-daemon.service. 2021-05-17T18:05:26.3026889Z Created symlink /etc/systemd/system/sockets.target.wants/avahi-daemon.socket → /lib/systemd/system/avahi-daemon.socket. 2021-05-17T18:05:27.4020703Z Setting up libnss-mdns:amd64 (0.14.1-1ubuntu1) ... 2021-05-17T18:05:27.4054046Z First installation detected... 2021-05-17T18:05:27.4054917Z Checking NSS setup... 2021-05-17T18:05:27.4090577Z Setting up libwacom2:amd64 (1.3-2ubuntu3) ... 2021-05-17T18:05:27.4155540Z Setting up libqt5sql5-sqlite:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:27.4185053Z Setting up python3-owslib (0.19.1-1) ... 2021-05-17T18:05:27.6824318Z Setting up libgdal26 (3.0.4+dfsg-1build3) ... 2021-05-17T18:05:27.6843116Z Setting up libqmi-glib5:amd64 (1.24.8-1) ... 2021-05-17T18:05:27.6871662Z Setting up libpdal-base9 (2.0.1+ds-1build3) ... 2021-05-17T18:05:27.6901681Z Setting up libinput-bin (1.15.5-1ubuntu0.2) ... 2021-05-17T18:05:27.6924653Z Setting up libwacom-bin (1.3-2ubuntu3) ... 2021-05-17T18:05:27.6951619Z Setting up libpdal-plugin-pgpointcloud (2.0.1+ds-1build3) ... 2021-05-17T18:05:27.7038904Z Setting up libpdal-plugin-icebridge (2.0.1+ds-1build3) ... 2021-05-17T18:05:27.7060096Z Setting up libpdal-plugin-python (2.0.1+ds-1build3) ... 2021-05-17T18:05:27.7089576Z Setting up python3-gdal (3.0.4+dfsg-1build3) ... 2021-05-17T18:05:27.8916287Z Setting up libinput10:amd64 (1.15.5-1ubuntu0.2) ... 2021-05-17T18:05:27.8946467Z Setting up libpdal-plugin-faux (2.0.1+ds-1build3) ... 2021-05-17T18:05:27.8970384Z Setting up grass-core (7.8.2-1build3) ... 2021-05-17T18:05:28.2391185Z /usr/lib/grass78/etc/python/grass/pygrass/gis/__init__.py:75: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:28.2393301Z if value is '': 2021-05-17T18:05:28.3354447Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:28.3355627Z if do_profiling is "True" or do_profiling is "1": 2021-05-17T18:05:28.3356757Z /usr/lib/grass78/etc/python/grass/temporal/core.py:65: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:28.3357754Z if do_profiling is "True" or do_profiling is "1": 2021-05-17T18:05:28.3358900Z /usr/lib/grass78/etc/python/grass/temporal/core.py:582: SyntaxWarning: "is not" with a literal. Did you mean "!="? 2021-05-17T18:05:28.3359947Z if driver_string is not None and driver_string is not "": 2021-05-17T18:05:28.3776943Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:28.3778175Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-17T18:05:28.3779626Z /usr/lib/grass78/etc/python/grass/temporal/temporal_algebra.py:2295: SyntaxWarning: "is" with a literal. Did you mean "=="? 2021-05-17T18:05:28.3780750Z if map_i.get_type() is "raster" or map_i.get_type() is "raster3d": 2021-05-17T18:05:28.4385813Z Setting up libpdal-plugin-sqlite (2.0.1+ds-1build3) ... 2021-05-17T18:05:28.4421722Z Setting up libqt5gui5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:28.4496102Z Setting up libqmi-proxy (1.24.8-1) ... 2021-05-17T18:05:28.4524082Z Setting up libqt5widgets5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:28.4546216Z Setting up libqt53dcore5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:28.4708694Z Setting up libqt5help5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:28.4747420Z Setting up libqt53dlogic5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:28.4772313Z Setting up qt5-gtk-platformtheme:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:28.4793333Z Setting up libqgis-native3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:05:28.4819520Z Setting up libqt5printsupport5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:28.4842025Z Setting up gdal-bin (3.0.4+dfsg-1build3) ... 2021-05-17T18:05:28.5683017Z Setting up qt5-image-formats-plugins:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:28.5712453Z Setting up libqt53dinput5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:28.5734499Z Setting up libqt5opengl5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:28.5761683Z Setting up modemmanager (1.12.8-1) ... 2021-05-17T18:05:28.6975508Z Created symlink /etc/systemd/system/dbus-org.freedesktop.ModemManager1.service → /lib/systemd/system/ModemManager.service. 2021-05-17T18:05:28.6978178Z Created symlink /etc/systemd/system/multi-user.target.wants/ModemManager.service → /lib/systemd/system/ModemManager.service. 2021-05-17T18:05:29.2341133Z Setting up libqt5quick5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:29.2374005Z Setting up libqt5designer5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:29.2405271Z Setting up libpdal-plugins (2.0.1+ds-1build3) ... 2021-05-17T18:05:29.2430501Z Setting up libqt5svg5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:29.2452028Z Setting up libqt53drender5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:29.2476333Z Setting up qhelpgenerator-qt5 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:29.2532201Z Setting up libqwt-qt5-6 (6.1.4-1.1build1) ... 2021-05-17T18:05:29.2567990Z Setting up libqscintilla2-qt5-15 (2.11.2+dfsg-6) ... 2021-05-17T18:05:29.2591880Z Setting up libqt5webkit5:amd64 (5.212.0~alpha4-1ubuntu2) ... 2021-05-17T18:05:29.2619837Z Setting up libqt5designercomponents5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:29.2646599Z Setting up libqt5quickwidgets5:amd64 (5.12.8-0ubuntu1) ... 2021-05-17T18:05:29.2672766Z Setting up libqgis-core3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:05:29.2704843Z Setting up libqt53dquickscene2d5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:29.2730403Z Setting up libqgis-gui3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:05:29.2760654Z Setting up libqgis-analysis3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:05:29.2792370Z Setting up qt5-assistant (5.12.8-0ubuntu1) ... 2021-05-17T18:05:29.2827340Z Setting up qttools5-dev-tools (5.12.8-0ubuntu1) ... 2021-05-17T18:05:29.2859981Z Setting up libqgispython3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:05:29.2901547Z Setting up qt3d-scene2d-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:29.2929467Z Setting up python3-pyqt5 (5.14.1+dfsg-3build1) ... 2021-05-17T18:05:29.4482433Z Setting up python3-pyqt5.qtsvg (5.14.1+dfsg-3build1) ... 2021-05-17T18:05:29.4517084Z Setting up libqt53danimation5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:29.4547174Z Setting up qt3d-defaultgeometryloader-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:05:29.4567511Z Setting up qgis-providers (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.0094448Z Setting up libqt53dextras5:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:06:00.0129412Z Setting up python3-pyqt5.qtsql (5.14.1+dfsg-3build1) ... 2021-05-17T18:06:00.0159058Z Setting up libqgis-customwidgets (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.0189539Z Setting up qt3d-gltfsceneio-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:06:00.0216060Z Setting up libqgis-server3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.0273632Z Setting up libqgisgrass7-3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.0314974Z Setting up qt3d-assimpsceneimport-plugin:amd64 (5.12.8+dfsg-0ubuntu1) ... 2021-05-17T18:06:00.0344870Z Setting up python3-qgis-common (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.1759589Z Setting up libqgis-3d3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.1800356Z Setting up python3-pyqt5.qtwebkit (5.14.1+dfsg-3build1) ... 2021-05-17T18:06:00.1828041Z Setting up qgis-provider-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.1861291Z Setting up python3-pyqt5.qsci (2.11.2+dfsg-6) ... 2021-05-17T18:06:00.1908149Z Setting up python3-qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.3468107Z Setting up libqgis-app3.10.4 (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.3494471Z Setting up qgis (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.3532534Z Setting up qgis-plugin-grass (3.10.4+dfsg-1ubuntu2) ... 2021-05-17T18:06:00.3650395Z Processing triggers for dbus (1.12.16-2ubuntu2.1) ... 2021-05-17T18:06:00.3833149Z Processing triggers for shared-mime-info (1.15-1) ... 2021-05-17T18:06:01.5305485Z Processing triggers for fontconfig (2.13.1-2ubuntu3) ... 2021-05-17T18:06:01.5480477Z Processing triggers for mime-support (3.64ubuntu1) ... 2021-05-17T18:06:01.5742443Z Processing triggers for hicolor-icon-theme (0.17-2) ... 2021-05-17T18:06:01.5917945Z Processing triggers for libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... 2021-05-17T18:06:01.6510197Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:06:01.6824469Z Processing triggers for systemd (245.4-4ubuntu3.6) ... 2021-05-17T18:06:01.9235975Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:06:12.6452709Z Setting up pinentry-gnome3 (1.1.0-3build1) ... 2021-05-17T18:06:12.6653772Z Setting up gnome-keyring (3.36.0-1ubuntu1) ... 2021-05-17T18:06:14.6058460Z ##[group]Run adigherman/actions/get-repo-name@master 2021-05-17T18:06:14.6059219Z with: 2021-05-17T18:06:14.6059702Z github_slug: neuroconductor/stapler 2021-05-17T18:06:14.6060147Z env: 2021-05-17T18:06:14.6060578Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:06:14.6061040Z TIC_DEPLOY_KEY: 2021-05-17T18:06:14.6061822Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:06:14.6063472Z GITHUB_PAT: *** 2021-05-17T18:06:14.6064258Z COVERALLS_TOKEN: *** 2021-05-17T18:06:14.6064738Z continue-on-error: true 2021-05-17T18:06:14.6065205Z VDIFFR_RUN_TESTS: 2021-05-17T18:06:14.6065671Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:06:14.6066115Z TZ: UTC 2021-05-17T18:06:14.6066501Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:06:14.6066899Z NOT_CRAN: true 2021-05-17T18:06:14.6067268Z ##[endgroup] 2021-05-17T18:06:14.6431953Z repo slug is: neuroconductor/stapler 2021-05-17T18:06:14.6503083Z ##[group]Run adigherman/actions/get-repo-version@master 2021-05-17T18:06:14.6503643Z env: 2021-05-17T18:06:14.6504086Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:06:14.6504547Z TIC_DEPLOY_KEY: 2021-05-17T18:06:14.6505333Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:06:14.6506581Z GITHUB_PAT: *** 2021-05-17T18:06:14.6507362Z COVERALLS_TOKEN: *** 2021-05-17T18:06:14.6507829Z continue-on-error: true 2021-05-17T18:06:14.6508304Z VDIFFR_RUN_TESTS: 2021-05-17T18:06:14.6508776Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:06:14.6509231Z TZ: UTC 2021-05-17T18:06:14.6509621Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:06:14.6510016Z NOT_CRAN: true 2021-05-17T18:06:14.6510387Z ##[endgroup] 2021-05-17T18:06:14.8395297Z ##[group]Run adigherman/actions/get-release-asset@master 2021-05-17T18:06:14.8395895Z with: 2021-05-17T18:06:14.8396274Z repo_name: stapler 2021-05-17T18:06:14.8396665Z repo_version: 0.7.2 2021-05-17T18:06:14.8397054Z runner_os: Linux 2021-05-17T18:06:14.8397415Z R_version: 4.1 2021-05-17T18:06:14.8397757Z env: 2021-05-17T18:06:14.8398188Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:06:14.8398640Z TIC_DEPLOY_KEY: 2021-05-17T18:06:14.8399426Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:06:14.8400663Z GITHUB_PAT: *** 2021-05-17T18:06:14.8401435Z COVERALLS_TOKEN: *** 2021-05-17T18:06:14.8401926Z continue-on-error: true 2021-05-17T18:06:14.8402394Z VDIFFR_RUN_TESTS: 2021-05-17T18:06:14.8402968Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:06:14.8403409Z TZ: UTC 2021-05-17T18:06:14.8403787Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:06:14.8404203Z NOT_CRAN: true 2021-05-17T18:06:14.8404582Z ##[endgroup] 2021-05-17T18:06:14.8789847Z Package: stapler 2021-05-17T18:06:14.8790466Z Version: 0.7.2 2021-05-17T18:06:14.8790956Z OS: Linux 2021-05-17T18:06:14.8817274Z ##[group]Run install.packages('remotes') 2021-05-17T18:06:14.8817972Z install.packages('remotes') 2021-05-17T18:06:14.8818960Z saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) 2021-05-17T18:06:14.8819953Z writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") 2021-05-17T18:06:14.8826536Z shell: /usr/local/bin/Rscript {0} 2021-05-17T18:06:14.8826954Z env: 2021-05-17T18:06:14.8827378Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:06:14.8827852Z TIC_DEPLOY_KEY: 2021-05-17T18:06:14.8828652Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:06:14.8829923Z GITHUB_PAT: *** 2021-05-17T18:06:14.8830704Z COVERALLS_TOKEN: *** 2021-05-17T18:06:14.8831192Z continue-on-error: true 2021-05-17T18:06:14.8831652Z VDIFFR_RUN_TESTS: 2021-05-17T18:06:14.8832131Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:06:14.8832594Z TZ: UTC 2021-05-17T18:06:14.8832980Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:06:14.8833378Z NOT_CRAN: true 2021-05-17T18:06:14.8833754Z ##[endgroup] 2021-05-17T18:06:15.4684127Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:06:15.4744451Z (as ‘lib’ is unspecified) 2021-05-17T18:06:29.3576591Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/remotes_2.3.0.tar.gz' 2021-05-17T18:06:29.9020656Z Content type 'binary/octet-stream' length 148709 bytes (145 KB) 2021-05-17T18:06:29.9114871Z ================================================== 2021-05-17T18:06:29.9115671Z downloaded 145 KB 2021-05-17T18:06:29.9116209Z 2021-05-17T18:06:30.1872059Z * installing *source* package ‘remotes’ ... 2021-05-17T18:06:30.1909163Z ** package ‘remotes’ successfully unpacked and MD5 sums checked 2021-05-17T18:06:30.1910004Z ** using staged installation 2021-05-17T18:06:30.2068993Z ** R 2021-05-17T18:06:30.2250541Z ** inst 2021-05-17T18:06:30.2261182Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:06:31.8955203Z ** help 2021-05-17T18:06:31.9814147Z *** installing help indices 2021-05-17T18:06:32.0371824Z ** building package indices 2021-05-17T18:06:32.2583439Z ** installing vignettes 2021-05-17T18:06:32.2648810Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:06:32.4331240Z ** testing if installed package can be loaded from final location 2021-05-17T18:06:32.6335579Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:06:32.6358538Z * DONE (remotes) 2021-05-17T18:06:32.6460028Z 2021-05-17T18:06:32.6461252Z The downloaded source packages are in 2021-05-17T18:06:32.6462883Z ‘/tmp/RtmpQfwkn4/downloaded_packages’ 2021-05-17T18:06:49.4098218Z ##[group]Run actions/cache@v1 2021-05-17T18:06:49.4098813Z with: 2021-05-17T18:06:49.4099224Z path: /home/runner/work/_temp/Library 2021-05-17T18:06:49.4102107Z key: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1-e0e8666fca37b31661498334ecff936ca34329c4d44a6e01cbba4e0f72224f8e 2021-05-17T18:06:49.4105784Z restore-keys: Linux-e3adb7ee20b68d8bd651f6f30d4cc1690a70853cf8f0c4dcbc5c14b00f693a6a-1- 2021-05-17T18:06:49.4106993Z env: 2021-05-17T18:06:49.4107427Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:06:49.4107876Z TIC_DEPLOY_KEY: 2021-05-17T18:06:49.4108664Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:06:49.4110433Z GITHUB_PAT: *** 2021-05-17T18:06:49.4111211Z COVERALLS_TOKEN: *** 2021-05-17T18:06:49.4111693Z continue-on-error: true 2021-05-17T18:06:49.4112160Z VDIFFR_RUN_TESTS: 2021-05-17T18:06:49.4112828Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:06:49.4113313Z TZ: UTC 2021-05-17T18:06:49.4113700Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:06:49.4114096Z NOT_CRAN: true 2021-05-17T18:06:49.4114466Z ##[endgroup] 2021-05-17T18:06:49.4517934Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-17T18:06:49.4575231Z ##[group]Run Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-17T18:06:49.4576032Z Rscript -e "remotes::install_github('r-hub/sysreqs')" 2021-05-17T18:06:49.4576755Z sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") 2021-05-17T18:06:49.4577383Z sudo -s eval "$sysreqs" 2021-05-17T18:06:49.4619965Z shell: /usr/bin/bash -e {0} 2021-05-17T18:06:49.4620360Z env: 2021-05-17T18:06:49.4620789Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:06:49.4621265Z TIC_DEPLOY_KEY: 2021-05-17T18:06:49.4622066Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:06:49.4623380Z GITHUB_PAT: *** 2021-05-17T18:06:49.4624158Z COVERALLS_TOKEN: *** 2021-05-17T18:06:49.4624647Z continue-on-error: true 2021-05-17T18:06:49.4625103Z VDIFFR_RUN_TESTS: 2021-05-17T18:06:49.4625589Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:06:49.4626018Z TZ: UTC 2021-05-17T18:06:49.4626432Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:06:49.4626832Z NOT_CRAN: true 2021-05-17T18:06:49.4627303Z RHUB_PLATFORM: linux-x86_64-ubuntu-gcc 2021-05-17T18:06:49.4627764Z ##[endgroup] 2021-05-17T18:06:49.6450056Z Using github PAT from envvar GITHUB_PAT 2021-05-17T18:06:49.9601334Z Downloading GitHub repo r-hub/sysreqs@HEAD 2021-05-17T18:07:05.1555616Z rprojroot (NA -> 2.0.2) [CRAN] 2021-05-17T18:07:05.1560425Z crayon (NA -> 1.4.1) [CRAN] 2021-05-17T18:07:05.1561407Z R6 (NA -> 2.5.0) [CRAN] 2021-05-17T18:07:05.1562236Z desc (NA -> 1.3.0) [CRAN] 2021-05-17T18:07:05.1563111Z debugme (NA -> 1.1.0) [CRAN] 2021-05-17T18:07:05.1577720Z Installing 5 packages: rprojroot, crayon, R6, desc, debugme 2021-05-17T18:07:05.1588928Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:07:05.1589839Z (as ‘lib’ is unspecified) 2021-05-17T18:07:19.1757573Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rprojroot_2.0.2.tar.gz' 2021-05-17T18:07:19.6808474Z Content type 'binary/octet-stream' length 61445 bytes (60 KB) 2021-05-17T18:07:19.6809364Z ================================================== 2021-05-17T18:07:19.6809861Z downloaded 60 KB 2021-05-17T18:07:19.6810165Z 2021-05-17T18:07:19.6850945Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/crayon_1.4.1.tar.gz' 2021-05-17T18:07:20.6395655Z Content type 'binary/octet-stream' length 35834 bytes (34 KB) 2021-05-17T18:07:20.6396414Z ================================================== 2021-05-17T18:07:20.6396918Z downloaded 34 KB 2021-05-17T18:07:20.6400389Z 2021-05-17T18:07:20.6434008Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/R6_2.5.0.tar.gz' 2021-05-17T18:07:22.8400128Z Content type 'binary/octet-stream' length 64110 bytes (62 KB) 2021-05-17T18:07:22.8400958Z ================================================== 2021-05-17T18:07:22.8401439Z downloaded 62 KB 2021-05-17T18:07:22.8401759Z 2021-05-17T18:07:22.8442023Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/desc_1.3.0.tar.gz' 2021-05-17T18:07:23.1187203Z Content type 'binary/octet-stream' length 292756 bytes (285 KB) 2021-05-17T18:07:23.1374131Z ================================================== 2021-05-17T18:07:23.1375173Z downloaded 285 KB 2021-05-17T18:07:23.1375729Z 2021-05-17T18:07:23.1410339Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/debugme_1.1.0.tar.gz' 2021-05-17T18:07:24.1168351Z Content type 'application/x-tar' length 997019 bytes (973 KB) 2021-05-17T18:07:24.1476994Z ================================================== 2021-05-17T18:07:24.1477516Z downloaded 973 KB 2021-05-17T18:07:24.1477807Z 2021-05-17T18:07:24.3921398Z * installing *source* package ‘rprojroot’ ... 2021-05-17T18:07:24.3943543Z ** package ‘rprojroot’ successfully unpacked and MD5 sums checked 2021-05-17T18:07:24.3944784Z ** using staged installation 2021-05-17T18:07:24.4073337Z ** R 2021-05-17T18:07:24.4116238Z ** inst 2021-05-17T18:07:24.4124925Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:07:24.8540184Z ** help 2021-05-17T18:07:24.8790487Z *** installing help indices 2021-05-17T18:07:24.9053339Z *** copying figures 2021-05-17T18:07:24.9058034Z ** building package indices 2021-05-17T18:07:25.0939418Z ** installing vignettes 2021-05-17T18:07:25.0962666Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:07:25.2636667Z ** testing if installed package can be loaded from final location 2021-05-17T18:07:25.4358576Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:07:25.4367563Z * DONE (rprojroot) 2021-05-17T18:07:25.6679474Z * installing *source* package ‘crayon’ ... 2021-05-17T18:07:25.6696586Z ** package ‘crayon’ successfully unpacked and MD5 sums checked 2021-05-17T18:07:25.6697820Z ** using staged installation 2021-05-17T18:07:25.6820478Z ** R 2021-05-17T18:07:25.6902445Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:07:26.4922403Z ** help 2021-05-17T18:07:26.5448698Z *** installing help indices 2021-05-17T18:07:26.5807416Z ** building package indices 2021-05-17T18:07:26.7956829Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:07:26.9669023Z ** testing if installed package can be loaded from final location 2021-05-17T18:07:27.1477104Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:07:27.1486411Z * DONE (crayon) 2021-05-17T18:07:27.3686609Z * installing *source* package ‘R6’ ... 2021-05-17T18:07:27.3700830Z ** package ‘R6’ successfully unpacked and MD5 sums checked 2021-05-17T18:07:27.3701905Z ** using staged installation 2021-05-17T18:07:27.3823041Z ** R 2021-05-17T18:07:27.3885447Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:07:27.8493438Z ** help 2021-05-17T18:07:27.8685089Z *** installing help indices 2021-05-17T18:07:27.8871520Z *** copying figures 2021-05-17T18:07:27.8874797Z ** building package indices 2021-05-17T18:07:28.0715539Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:07:28.2393569Z ** testing if installed package can be loaded from final location 2021-05-17T18:07:28.4144793Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:07:28.4152072Z * DONE (R6) 2021-05-17T18:07:28.7106357Z * installing *source* package ‘desc’ ... 2021-05-17T18:07:28.7155154Z ** package ‘desc’ successfully unpacked and MD5 sums checked 2021-05-17T18:07:28.7156325Z ** using staged installation 2021-05-17T18:07:28.7304136Z ** R 2021-05-17T18:07:28.7425340Z ** inst 2021-05-17T18:07:28.7442706Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:07:30.2170162Z ** help 2021-05-17T18:07:30.3394058Z *** installing help indices 2021-05-17T18:07:30.4230875Z ** building package indices 2021-05-17T18:07:30.6863975Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:07:30.8673383Z ** testing if installed package can be loaded from final location 2021-05-17T18:07:31.0750298Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:07:31.0768501Z * DONE (desc) 2021-05-17T18:07:31.3196910Z * installing *source* package ‘debugme’ ... 2021-05-17T18:07:31.3227358Z ** package ‘debugme’ successfully unpacked and MD5 sums checked 2021-05-17T18:07:31.3228590Z ** using staged installation 2021-05-17T18:07:31.3329516Z ** R 2021-05-17T18:07:31.3358737Z ** inst 2021-05-17T18:07:31.3378114Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:07:31.6361677Z ** help 2021-05-17T18:07:31.6490095Z *** installing help indices 2021-05-17T18:07:31.6697634Z ** building package indices 2021-05-17T18:07:31.8552741Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:07:32.0304062Z ** testing if installed package can be loaded from final location 2021-05-17T18:07:32.2043674Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:07:32.2044649Z * DONE (debugme) 2021-05-17T18:07:32.2088740Z 2021-05-17T18:07:32.9909294Z The downloaded source packages are in 2021-05-17T18:07:32.9911076Z * checking for file ‘/tmp/RtmpLK6NSR/remotes691c6c877283/r-hub-sysreqs-f068afa/DESCRIPTION’ ... OK 2021-05-17T18:07:32.9913327Z ‘/tmp/RtmpLK6NSR/downloaded_packages’ 2021-05-17T18:07:32.9914034Z * preparing ‘sysreqs’: 2021-05-17T18:07:32.9915373Z Running `R CMD build`... 2021-05-17T18:07:32.9916192Z * checking DESCRIPTION meta-information ... OK 2021-05-17T18:07:32.9917944Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:07:32.9918715Z (as ‘lib’ is unspecified) 2021-05-17T18:07:32.9919457Z * installing *source* package ‘sysreqs’ ... 2021-05-17T18:07:32.9920061Z ** using staged installation 2021-05-17T18:07:32.9920469Z ** R 2021-05-17T18:07:32.9921182Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:07:32.9921703Z ** help 2021-05-17T18:07:32.9922550Z * checking for LF line-endings in source and make files and shell scripts 2021-05-17T18:07:32.9923502Z * checking for empty or unneeded directories 2021-05-17T18:07:32.9924413Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-17T18:07:32.9925307Z * building ‘sysreqs_1.0.0.9000.tar.gz’ 2021-05-17T18:07:33.0069449Z *** installing help indices 2021-05-17T18:07:33.0231332Z ** building package indices 2021-05-17T18:07:33.2090945Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:07:33.3967352Z ** testing if installed package can be loaded from final location 2021-05-17T18:07:33.5847312Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:07:33.5848659Z * DONE (sysreqs) 2021-05-17T18:07:49.8232194Z Hit:1 http://azure.archive.ubuntu.com/ubuntu focal InRelease 2021-05-17T18:07:49.8234099Z Hit:2 http://azure.archive.ubuntu.com/ubuntu focal-updates InRelease 2021-05-17T18:07:49.8235518Z Hit:3 http://azure.archive.ubuntu.com/ubuntu focal-backports InRelease 2021-05-17T18:07:49.8472065Z Get:4 http://security.ubuntu.com/ubuntu focal-security InRelease [109 kB] 2021-05-17T18:07:49.8954088Z Hit:5 https://download.mono-project.com/repo/ubuntu stable-focal InRelease 2021-05-17T18:07:50.0809278Z Hit:6 https://packages.microsoft.com/ubuntu/20.04/prod focal InRelease 2021-05-17T18:07:50.1185893Z Hit:7 http://ppa.launchpad.net/apt-fast/stable/ubuntu focal InRelease 2021-05-17T18:07:50.2765848Z Hit:8 http://ppa.launchpad.net/cran/travis/ubuntu focal InRelease 2021-05-17T18:07:50.3170734Z Get:9 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [656 kB] 2021-05-17T18:07:50.3901328Z Get:10 http://security.ubuntu.com/ubuntu focal-security/main Translation-en [132 kB] 2021-05-17T18:07:50.3903470Z Get:11 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [566 kB] 2021-05-17T18:07:50.3963988Z Get:12 http://security.ubuntu.com/ubuntu focal-security/universe Translation-en [85.2 kB] 2021-05-17T18:07:50.4379817Z Hit:13 http://ppa.launchpad.net/ubuntu-toolchain-r/test/ubuntu focal InRelease 2021-05-17T18:07:50.7714137Z Fetched 1549 kB in 1s (1764 kB/s) 2021-05-17T18:07:51.5384136Z Reading package lists... 2021-05-17T18:07:51.6127607Z Reading package lists... 2021-05-17T18:07:51.7665445Z Building dependency tree... 2021-05-17T18:07:51.7690185Z Reading state information... 2021-05-17T18:07:51.9222965Z libicu-dev is already the newest version (66.1-2ubuntu2). 2021-05-17T18:07:51.9223925Z libicu-dev set to manually installed. 2021-05-17T18:07:51.9224825Z libxml2-dev is already the newest version (2.9.10+dfsg-5). 2021-05-17T18:07:51.9225654Z libxml2-dev set to manually installed. 2021-05-17T18:07:51.9226888Z libssl-dev is already the newest version (1.1.1f-1ubuntu2.3). 2021-05-17T18:07:51.9227728Z pandoc is already the newest version (2.7.3-1). 2021-05-17T18:07:51.9228464Z The following additional packages will be installed: 2021-05-17T18:07:51.9233946Z libbibutils6 libghc-pandoc-citeproc-data 2021-05-17T18:07:51.9241463Z Suggested packages: 2021-05-17T18:07:51.9242664Z libcurl4-doc libidn11-dev libldap2-dev librtmp-dev 2021-05-17T18:07:51.9683362Z The following NEW packages will be installed: 2021-05-17T18:07:51.9687220Z libbibutils6 libcurl4-openssl-dev libghc-pandoc-citeproc-data 2021-05-17T18:07:51.9688440Z pandoc-citeproc 2021-05-17T18:07:51.9866875Z 0 upgraded, 4 newly installed, 0 to remove and 33 not upgraded. 2021-05-17T18:07:51.9867763Z Need to get 13.7 MB of archives. 2021-05-17T18:07:51.9868506Z After this operation, 109 MB of additional disk space will be used. 2021-05-17T18:07:51.9870192Z Get:1 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB] 2021-05-17T18:07:51.9976333Z Get:2 http://azure.archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.5 [321 kB] 2021-05-17T18:07:52.0018177Z Get:3 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB] 2021-05-17T18:07:52.0023899Z Get:4 http://azure.archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB] 2021-05-17T18:07:52.6416113Z Fetched 13.7 MB in 0s (54.2 MB/s) 2021-05-17T18:07:52.6764691Z Selecting previously unselected package libbibutils6. 2021-05-17T18:07:52.6849998Z (Reading database ... 2021-05-17T18:07:52.6850546Z (Reading database ... 5% 2021-05-17T18:07:52.6851240Z (Reading database ... 10% 2021-05-17T18:07:52.6851815Z (Reading database ... 15% 2021-05-17T18:07:52.6852392Z (Reading database ... 20% 2021-05-17T18:07:52.6852963Z (Reading database ... 25% 2021-05-17T18:07:52.6853518Z (Reading database ... 30% 2021-05-17T18:07:52.6854131Z (Reading database ... 35% 2021-05-17T18:07:52.6854700Z (Reading database ... 40% 2021-05-17T18:07:52.6855254Z (Reading database ... 45% 2021-05-17T18:07:52.6856455Z (Reading database ... 50% 2021-05-17T18:07:52.6900665Z (Reading database ... 55% 2021-05-17T18:07:52.6950836Z (Reading database ... 60% 2021-05-17T18:07:52.6992514Z (Reading database ... 65% 2021-05-17T18:07:52.7094723Z (Reading database ... 70% 2021-05-17T18:07:52.7209047Z (Reading database ... 75% 2021-05-17T18:07:52.7456694Z (Reading database ... 80% 2021-05-17T18:07:52.7551051Z (Reading database ... 85% 2021-05-17T18:07:52.7923623Z (Reading database ... 90% 2021-05-17T18:07:52.8000231Z (Reading database ... 95% 2021-05-17T18:07:52.8000875Z (Reading database ... 100% 2021-05-17T18:07:52.8001729Z (Reading database ... 285139 files and directories currently installed.) 2021-05-17T18:07:52.8128825Z Preparing to unpack .../libbibutils6_6.2-1_amd64.deb ... 2021-05-17T18:07:52.8169997Z Unpacking libbibutils6 (6.2-1) ... 2021-05-17T18:07:52.8900841Z Selecting previously unselected package libcurl4-openssl-dev:amd64. 2021-05-17T18:07:52.9139724Z Preparing to unpack .../libcurl4-openssl-dev_7.68.0-1ubuntu2.5_amd64.deb ... 2021-05-17T18:07:52.9152682Z Unpacking libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-17T18:07:52.9736628Z Selecting previously unselected package libghc-pandoc-citeproc-data. 2021-05-17T18:07:53.0025648Z Preparing to unpack .../libghc-pandoc-citeproc-data_0.15.0.1-1build4_all.deb ... 2021-05-17T18:07:53.0037732Z Unpacking libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-17T18:07:53.0427966Z Selecting previously unselected package pandoc-citeproc. 2021-05-17T18:07:53.0729384Z Preparing to unpack .../pandoc-citeproc_0.15.0.1-1build4_amd64.deb ... 2021-05-17T18:07:53.0757916Z Unpacking pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-17T18:07:53.0787231Z Replaced by files in installed package pandoc (2.7.3-1) ... 2021-05-17T18:07:54.3947393Z Setting up libghc-pandoc-citeproc-data (0.15.0.1-1build4) ... 2021-05-17T18:07:54.4009975Z Setting up libbibutils6 (6.2-1) ... 2021-05-17T18:07:54.4064249Z Setting up libcurl4-openssl-dev:amd64 (7.68.0-1ubuntu2.5) ... 2021-05-17T18:07:54.4122073Z Setting up pandoc-citeproc (0.15.0.1-1build4) ... 2021-05-17T18:07:54.4170021Z Processing triggers for man-db (2.9.1-1) ... 2021-05-17T18:07:57.4954459Z Processing triggers for libc-bin (2.31-0ubuntu9.2) ... 2021-05-17T18:07:59.3866539Z ##[group]Run remotes::install_github("ropensci/tic") 2021-05-17T18:07:59.3867251Z remotes::install_github("ropensci/tic") 2021-05-17T18:07:59.3867916Z remotes::install_github("muschellij2/ghtravis") 2021-05-17T18:07:59.3868582Z remotes::install_github("muschellij2/aghast") 2021-05-17T18:07:59.3869165Z remotes::install_cran("covr") 2021-05-17T18:07:59.3876012Z shell: /usr/local/bin/Rscript {0} 2021-05-17T18:07:59.3876435Z env: 2021-05-17T18:07:59.3876879Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:07:59.3877373Z TIC_DEPLOY_KEY: 2021-05-17T18:07:59.3878184Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:07:59.3879766Z GITHUB_PAT: *** 2021-05-17T18:07:59.3880659Z COVERALLS_TOKEN: *** 2021-05-17T18:07:59.3881151Z continue-on-error: true 2021-05-17T18:07:59.3881608Z VDIFFR_RUN_TESTS: 2021-05-17T18:07:59.3882089Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:07:59.3882580Z TZ: UTC 2021-05-17T18:07:59.3882966Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:07:59.3883365Z NOT_CRAN: true 2021-05-17T18:07:59.3883742Z ##[endgroup] 2021-05-17T18:07:59.5774174Z Using github PAT from envvar GITHUB_PAT 2021-05-17T18:07:59.9998303Z Downloading GitHub repo ropensci/tic@HEAD 2021-05-17T18:08:15.0207533Z rlang (NA -> 0.4.11) [CRAN] 2021-05-17T18:08:15.0209141Z magrittr (NA -> 2.0.1 ) [CRAN] 2021-05-17T18:08:15.0210158Z glue (NA -> 1.4.2 ) [CRAN] 2021-05-17T18:08:15.0212122Z sys (NA -> 3.4 ) [CRAN] 2021-05-17T18:08:15.0212895Z askpass (NA -> 1.1 ) [CRAN] 2021-05-17T18:08:15.0213620Z openssl (NA -> 1.4.4 ) [CRAN] 2021-05-17T18:08:15.0214281Z mime (NA -> 0.10 ) [CRAN] 2021-05-17T18:08:15.0214938Z curl (NA -> 4.3.1 ) [CRAN] 2021-05-17T18:08:15.0215620Z jsonlite (NA -> 1.7.2 ) [CRAN] 2021-05-17T18:08:15.0216276Z ini (NA -> 0.3.1 ) [CRAN] 2021-05-17T18:08:15.0216919Z httr (NA -> 1.4.2 ) [CRAN] 2021-05-17T18:08:15.0217587Z gitcreds (NA -> 0.1.1 ) [CRAN] 2021-05-17T18:08:15.0218254Z cli (NA -> 2.5.0 ) [CRAN] 2021-05-17T18:08:15.0219219Z zip (NA -> 2.1.1 ) [CRAN] 2021-05-17T18:08:15.0219898Z rstudioapi (NA -> 0.13 ) [CRAN] 2021-05-17T18:08:15.0220659Z credentials (NA -> 1.3.0 ) [CRAN] 2021-05-17T18:08:15.0221373Z fastmap (NA -> 1.1.0 ) [CRAN] 2021-05-17T18:08:15.0222022Z yaml (NA -> 2.2.1 ) [CRAN] 2021-05-17T18:08:15.0222678Z withr (NA -> 2.4.2 ) [CRAN] 2021-05-17T18:08:15.0223335Z whisker (NA -> 0.4 ) [CRAN] 2021-05-17T18:08:15.0224027Z rappdirs (NA -> 0.3.3 ) [CRAN] 2021-05-17T18:08:15.0224717Z purrr (NA -> 0.3.4 ) [CRAN] 2021-05-17T18:08:15.0225395Z lifecycle (NA -> 1.0.0 ) [CRAN] 2021-05-17T18:08:15.0226076Z gh (NA -> 1.3.0 ) [CRAN] 2021-05-17T18:08:15.0226710Z gert (NA -> 1.3.0 ) [CRAN] 2021-05-17T18:08:15.0227353Z fs (NA -> 1.5.0 ) [CRAN] 2021-05-17T18:08:15.0228006Z clipr (NA -> 0.7.1 ) [CRAN] 2021-05-17T18:08:15.0228661Z cachem (NA -> 1.0.5 ) [CRAN] 2021-05-17T18:08:15.0229343Z usethis (NA -> 2.0.1 ) [CRAN] 2021-05-17T18:08:15.0230029Z memoise (NA -> 2.0.0 ) [CRAN] 2021-05-17T18:08:15.0230685Z git2r (NA -> 0.28.0) [CRAN] 2021-05-17T18:08:15.0300067Z Installing 31 packages: rlang, magrittr, glue, sys, askpass, openssl, mime, curl, jsonlite, ini, httr, gitcreds, cli, zip, rstudioapi, credentials, fastmap, yaml, withr, whisker, rappdirs, purrr, lifecycle, gh, gert, fs, clipr, cachem, usethis, memoise, git2r 2021-05-17T18:08:15.0308677Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:08:15.0309435Z (as ‘lib’ is unspecified) 2021-05-17T18:08:29.1550725Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rlang_0.4.11.tar.gz' 2021-05-17T18:08:29.5462286Z Content type 'binary/octet-stream' length 859995 bytes (839 KB) 2021-05-17T18:08:29.5913766Z ================================================== 2021-05-17T18:08:29.5914327Z downloaded 839 KB 2021-05-17T18:08:29.5916143Z 2021-05-17T18:08:29.5951095Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/magrittr_2.0.1.tar.gz' 2021-05-17T18:08:29.9858766Z Content type 'binary/octet-stream' length 264532 bytes (258 KB) 2021-05-17T18:08:30.1009467Z ================================================== 2021-05-17T18:08:30.1010396Z downloaded 258 KB 2021-05-17T18:08:30.1011031Z 2021-05-17T18:08:30.1051161Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/glue_1.4.2.tar.gz' 2021-05-17T18:08:30.4904276Z Content type 'binary/octet-stream' length 100043 bytes (97 KB) 2021-05-17T18:08:30.4993832Z ================================================== 2021-05-17T18:08:30.4994626Z downloaded 97 KB 2021-05-17T18:08:30.4995104Z 2021-05-17T18:08:30.5034642Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sys_3.4.tar.gz' 2021-05-17T18:08:30.8899613Z Content type 'binary/octet-stream' length 20291 bytes (19 KB) 2021-05-17T18:08:30.8900480Z ================================================== 2021-05-17T18:08:30.8900963Z downloaded 19 KB 2021-05-17T18:08:30.8901285Z 2021-05-17T18:08:30.8941038Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/askpass_1.1.tar.gz' 2021-05-17T18:08:31.4478706Z Content type 'application/x-tar' length 5688 bytes 2021-05-17T18:08:31.4481343Z ================================================== 2021-05-17T18:08:31.4481908Z downloaded 5688 bytes 2021-05-17T18:08:31.4482279Z 2021-05-17T18:08:31.4522259Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/openssl_1.4.4.tar.gz' 2021-05-17T18:08:31.6601261Z Content type 'binary/octet-stream' length 1311683 bytes (1.3 MB) 2021-05-17T18:08:31.6951063Z ================================================== 2021-05-17T18:08:31.6951574Z downloaded 1.3 MB 2021-05-17T18:08:31.6951864Z 2021-05-17T18:08:31.6986484Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/mime_0.10.tar.gz' 2021-05-17T18:08:32.0376405Z Content type 'binary/octet-stream' length 12958 bytes (12 KB) 2021-05-17T18:08:32.0377213Z ================================================== 2021-05-17T18:08:32.0377713Z downloaded 12 KB 2021-05-17T18:08:32.0378036Z 2021-05-17T18:08:32.0415484Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/curl_4.3.1.tar.gz' 2021-05-17T18:08:33.7983887Z Content type 'binary/octet-stream' length 798588 bytes (779 KB) 2021-05-17T18:08:33.8252995Z ================================================== 2021-05-17T18:08:33.8253564Z downloaded 779 KB 2021-05-17T18:08:33.8253878Z 2021-05-17T18:08:33.8292330Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/jsonlite_1.7.2.tar.gz' 2021-05-17T18:08:34.3430892Z Content type 'binary/octet-stream' length 422264 bytes (412 KB) 2021-05-17T18:08:34.3659368Z ================================================== 2021-05-17T18:08:34.3659878Z downloaded 412 KB 2021-05-17T18:08:34.3660189Z 2021-05-17T18:08:34.3767152Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ini_0.3.1.tar.gz' 2021-05-17T18:08:34.7595203Z Content type 'application/x-tar' length 3475 bytes 2021-05-17T18:08:34.7596698Z ================================================== 2021-05-17T18:08:34.7597445Z downloaded 3475 bytes 2021-05-17T18:08:34.7597980Z 2021-05-17T18:08:34.7627646Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/httr_1.4.2.tar.gz' 2021-05-17T18:08:35.1870482Z Content type 'binary/octet-stream' length 159877 bytes (156 KB) 2021-05-17T18:08:35.2012569Z ================================================== 2021-05-17T18:08:35.2013078Z downloaded 156 KB 2021-05-17T18:08:35.2013365Z 2021-05-17T18:08:35.2052166Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gitcreds_0.1.1.tar.gz' 2021-05-17T18:08:35.4231832Z Content type 'binary/octet-stream' length 62129 bytes (60 KB) 2021-05-17T18:08:35.4286490Z ================================================== 2021-05-17T18:08:35.4287016Z downloaded 60 KB 2021-05-17T18:08:35.4287302Z 2021-05-17T18:08:35.4325814Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cli_2.5.0.tar.gz' 2021-05-17T18:08:35.7573874Z Content type 'binary/octet-stream' length 158132 bytes (154 KB) 2021-05-17T18:08:35.7710755Z ================================================== 2021-05-17T18:08:35.7711304Z downloaded 154 KB 2021-05-17T18:08:35.7711577Z 2021-05-17T18:08:35.7749994Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/zip_2.1.1.tar.gz' 2021-05-17T18:08:36.1578115Z Content type 'binary/octet-stream' length 113091 bytes (110 KB) 2021-05-17T18:08:36.1632705Z ================================================== 2021-05-17T18:08:36.1633320Z downloaded 110 KB 2021-05-17T18:08:36.1633652Z 2021-05-17T18:08:36.1673894Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rstudioapi_0.13.tar.gz' 2021-05-17T18:08:36.4413087Z Content type 'binary/octet-stream' length 109870 bytes (107 KB) 2021-05-17T18:08:36.4515217Z ================================================== 2021-05-17T18:08:36.4515728Z downloaded 107 KB 2021-05-17T18:08:36.4516001Z 2021-05-17T18:08:36.4557910Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/credentials_1.3.0.tar.gz' 2021-05-17T18:08:36.6991405Z Content type 'binary/octet-stream' length 230676 bytes (225 KB) 2021-05-17T18:08:36.7198665Z ================================================== 2021-05-17T18:08:36.7199304Z downloaded 225 KB 2021-05-17T18:08:36.7199671Z 2021-05-17T18:08:36.7245188Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fastmap_1.1.0.tar.gz' 2021-05-17T18:08:37.2734893Z Content type 'binary/octet-stream' length 44517 bytes (43 KB) 2021-05-17T18:08:37.2735717Z ================================================== 2021-05-17T18:08:37.2736225Z downloaded 43 KB 2021-05-17T18:08:37.2736580Z 2021-05-17T18:08:37.2778932Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/yaml_2.2.1.tar.gz' 2021-05-17T18:08:37.4909302Z Content type 'binary/octet-stream' length 92979 bytes (90 KB) 2021-05-17T18:08:37.4980979Z ================================================== 2021-05-17T18:08:37.4981756Z downloaded 90 KB 2021-05-17T18:08:37.4982328Z 2021-05-17T18:08:37.5021396Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/withr_2.4.2.tar.gz' 2021-05-17T18:08:37.9848934Z Content type 'binary/octet-stream' length 95150 bytes (92 KB) 2021-05-17T18:08:37.9904818Z ================================================== 2021-05-17T18:08:37.9905390Z downloaded 92 KB 2021-05-17T18:08:37.9905714Z 2021-05-17T18:08:37.9945279Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/whisker_0.4.tar.gz' 2021-05-17T18:08:38.9498112Z Content type 'application/x-tar' length 28675 bytes (28 KB) 2021-05-17T18:08:38.9499448Z ================================================== 2021-05-17T18:08:38.9499929Z downloaded 28 KB 2021-05-17T18:08:38.9500244Z 2021-05-17T18:08:38.9538679Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rappdirs_0.3.3.tar.gz' 2021-05-17T18:08:39.5518987Z Content type 'binary/octet-stream' length 12326 bytes (12 KB) 2021-05-17T18:08:39.5520845Z ================================================== 2021-05-17T18:08:39.5521546Z downloaded 12 KB 2021-05-17T18:08:39.5522019Z 2021-05-17T18:08:39.5589189Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/purrr_0.3.4.tar.gz' 2021-05-17T18:08:39.9460886Z Content type 'binary/octet-stream' length 373001 bytes (364 KB) 2021-05-17T18:08:39.9650193Z ================================================== 2021-05-17T18:08:39.9650781Z downloaded 364 KB 2021-05-17T18:08:39.9651051Z 2021-05-17T18:08:39.9692501Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lifecycle_1.0.0.tar.gz' 2021-05-17T18:08:40.1770619Z Content type 'binary/octet-stream' length 83493 bytes (81 KB) 2021-05-17T18:08:40.1834046Z ================================================== 2021-05-17T18:08:40.1834634Z downloaded 81 KB 2021-05-17T18:08:40.1835014Z 2021-05-17T18:08:40.1877276Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gh_1.3.0.tar.gz' 2021-05-17T18:08:40.7650867Z Content type 'binary/octet-stream' length 45853 bytes (44 KB) 2021-05-17T18:08:40.7652565Z ================================================== 2021-05-17T18:08:40.7653315Z downloaded 44 KB 2021-05-17T18:08:40.7653889Z 2021-05-17T18:08:40.7690937Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/gert_1.3.0.tar.gz' 2021-05-17T18:08:41.1471835Z Content type 'binary/octet-stream' length 66528 bytes (64 KB) 2021-05-17T18:08:41.1473531Z ================================================== 2021-05-17T18:08:41.1474252Z downloaded 64 KB 2021-05-17T18:08:41.1474813Z 2021-05-17T18:08:41.1510750Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fs_1.5.0.tar.gz' 2021-05-17T18:08:41.6572944Z Content type 'binary/octet-stream' length 800044 bytes (781 KB) 2021-05-17T18:08:41.6834083Z ================================================== 2021-05-17T18:08:41.6835225Z downloaded 781 KB 2021-05-17T18:08:41.6835784Z 2021-05-17T18:08:41.6870805Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/clipr_0.7.1.tar.gz' 2021-05-17T18:08:41.9108202Z Content type 'binary/octet-stream' length 20919 bytes (20 KB) 2021-05-17T18:08:41.9110615Z ================================================== 2021-05-17T18:08:41.9111503Z downloaded 20 KB 2021-05-17T18:08:41.9111855Z 2021-05-17T18:08:41.9150488Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cachem_1.0.5.tar.gz' 2021-05-17T18:08:42.3054676Z Content type 'binary/octet-stream' length 24954 bytes (24 KB) 2021-05-17T18:08:42.3056175Z ================================================== 2021-05-17T18:08:42.3056903Z downloaded 24 KB 2021-05-17T18:08:42.3057432Z 2021-05-17T18:08:42.3089369Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/usethis_2.0.1.tar.gz' 2021-05-17T18:08:43.0390896Z Content type 'binary/octet-stream' length 304209 bytes (297 KB) 2021-05-17T18:08:43.0652767Z ================================================== 2021-05-17T18:08:43.0653389Z downloaded 297 KB 2021-05-17T18:08:43.0653679Z 2021-05-17T18:08:43.0692613Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/memoise_2.0.0.tar.gz' 2021-05-17T18:08:43.3059735Z Content type 'binary/octet-stream' length 17411 bytes (17 KB) 2021-05-17T18:08:43.3062952Z ================================================== 2021-05-17T18:08:43.3063818Z downloaded 17 KB 2021-05-17T18:08:43.3064371Z 2021-05-17T18:08:43.3102746Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/git2r_0.28.0.tar.gz' 2021-05-17T18:08:43.9788026Z Content type 'binary/octet-stream' length 1223574 bytes (1.2 MB) 2021-05-17T18:08:44.0095368Z ================================================== 2021-05-17T18:08:44.0096514Z downloaded 1.2 MB 2021-05-17T18:08:44.0097068Z 2021-05-17T18:08:44.4959758Z * installing *source* package ‘rlang’ ... 2021-05-17T18:08:44.5088540Z ** package ‘rlang’ successfully unpacked and MD5 sums checked 2021-05-17T18:08:44.5091035Z ** using staged installation 2021-05-17T18:08:44.5271268Z ** libs 2021-05-17T18:08:44.5330438Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c capture.c -o capture.o 2021-05-17T18:08:44.6259435Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c export.c -o export.o 2021-05-17T18:08:44.9285137Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c internal.c -o internal.o 2021-05-17T18:08:47.0610880Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c lib.c -o lib.o 2021-05-17T18:08:47.9930883Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./lib/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-17T18:08:48.0307717Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rlang.so capture.o export.o internal.o lib.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:08:48.0825606Z installing to /home/runner/work/_temp/Library/00LOCK-rlang/00new/rlang/libs 2021-05-17T18:08:48.0851482Z ** R 2021-05-17T18:08:48.1289242Z ** inst 2021-05-17T18:08:48.1298478Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:08:51.3047755Z ** help 2021-05-17T18:08:51.9933966Z *** installing help indices 2021-05-17T18:08:52.2702337Z *** copying figures 2021-05-17T18:08:52.2706619Z ** building package indices 2021-05-17T18:08:52.7239230Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:08:52.9478829Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:08:53.0307551Z ** testing if installed package can be loaded from final location 2021-05-17T18:08:53.2847563Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:08:53.2883051Z * DONE (rlang) 2021-05-17T18:08:53.5341660Z * installing *source* package ‘magrittr’ ... 2021-05-17T18:08:53.5367199Z ** package ‘magrittr’ successfully unpacked and MD5 sums checked 2021-05-17T18:08:53.5369478Z ** using staged installation 2021-05-17T18:08:53.5495672Z ** libs 2021-05-17T18:08:53.5539495Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pipe.c -o pipe.o 2021-05-17T18:08:53.6721871Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T18:08:53.7231589Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o magrittr.so pipe.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:08:53.7460274Z installing to /home/runner/work/_temp/Library/00LOCK-magrittr/00new/magrittr/libs 2021-05-17T18:08:53.7461404Z ** R 2021-05-17T18:08:53.7492360Z ** inst 2021-05-17T18:08:53.7507016Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:08:54.0246881Z ** help 2021-05-17T18:08:54.0647028Z *** installing help indices 2021-05-17T18:08:54.0936768Z *** copying figures 2021-05-17T18:08:54.0939579Z ** building package indices 2021-05-17T18:08:54.2905475Z ** installing vignettes 2021-05-17T18:08:54.2964413Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:08:54.4662171Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:08:54.4833067Z ** testing if installed package can be loaded from final location 2021-05-17T18:08:54.6542379Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:08:54.6543303Z * DONE (magrittr) 2021-05-17T18:08:54.8896534Z * installing *source* package ‘glue’ ... 2021-05-17T18:08:54.8915976Z ** package ‘glue’ successfully unpacked and MD5 sums checked 2021-05-17T18:08:54.8917163Z ** using staged installation 2021-05-17T18:08:54.9064985Z ** libs 2021-05-17T18:08:54.9112958Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c glue.c -o glue.o 2021-05-17T18:08:55.0244481Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:08:55.0682166Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c trim.c -o trim.o 2021-05-17T18:08:55.1495888Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o glue.so glue.o init.o trim.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:08:55.1740894Z installing to /home/runner/work/_temp/Library/00LOCK-glue/00new/glue/libs 2021-05-17T18:08:55.1741567Z ** R 2021-05-17T18:08:55.1776443Z ** inst 2021-05-17T18:08:55.1789403Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:08:55.6376222Z ** help 2021-05-17T18:08:55.6662794Z *** installing help indices 2021-05-17T18:08:55.6947495Z *** copying figures 2021-05-17T18:08:55.6950336Z ** building package indices 2021-05-17T18:08:55.8881667Z ** installing vignettes 2021-05-17T18:08:55.8935928Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:08:56.1085536Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:08:56.1264732Z ** testing if installed package can be loaded from final location 2021-05-17T18:08:56.3395829Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:08:56.3403977Z * DONE (glue) 2021-05-17T18:08:56.5501259Z * installing *source* package ‘sys’ ... 2021-05-17T18:08:56.5517076Z ** package ‘sys’ successfully unpacked and MD5 sums checked 2021-05-17T18:08:56.5520231Z ** using staged installation 2021-05-17T18:08:56.5708425Z ** libs 2021-05-17T18:08:56.5756682Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c exec.c -o exec.o 2021-05-17T18:08:56.7753990Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:08:56.8195252Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o sys.so exec.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:08:56.8420480Z installing to /home/runner/work/_temp/Library/00LOCK-sys/00new/sys/libs 2021-05-17T18:08:56.8431032Z ** R 2021-05-17T18:08:56.8464833Z ** inst 2021-05-17T18:08:56.8472562Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:08:57.1204400Z ** help 2021-05-17T18:08:57.1400625Z *** installing help indices 2021-05-17T18:08:57.1588830Z ** building package indices 2021-05-17T18:08:57.3519053Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:08:57.5298750Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:08:57.5472174Z ** testing if installed package can be loaded from final location 2021-05-17T18:08:57.7220811Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:08:57.7226123Z * DONE (sys) 2021-05-17T18:08:57.9255967Z * installing *source* package ‘mime’ ... 2021-05-17T18:08:57.9269801Z ** package ‘mime’ successfully unpacked and MD5 sums checked 2021-05-17T18:08:57.9272594Z ** using staged installation 2021-05-17T18:08:57.9403122Z ** libs 2021-05-17T18:08:57.9455054Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:08:57.9898014Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o 2021-05-17T18:08:58.0454065Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o mime.so init.o rawmatch.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:08:58.0607020Z installing to /home/runner/work/_temp/Library/00LOCK-mime/00new/mime/libs 2021-05-17T18:08:58.0621927Z ** R 2021-05-17T18:08:58.0678546Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:08:58.3904325Z ** help 2021-05-17T18:08:58.4114299Z *** installing help indices 2021-05-17T18:08:58.4269152Z ** building package indices 2021-05-17T18:08:58.6135892Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:08:58.7885804Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:08:58.8060117Z ** testing if installed package can be loaded from final location 2021-05-17T18:08:58.9782159Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:08:58.9788993Z * DONE (mime) 2021-05-17T18:08:59.3228210Z * installing *source* package ‘curl’ ... 2021-05-17T18:08:59.3306918Z ** package ‘curl’ successfully unpacked and MD5 sums checked 2021-05-17T18:08:59.3307767Z ** using staged installation 2021-05-17T18:08:59.3397432Z Found pkg-config cflags and libs! 2021-05-17T18:08:59.4216409Z Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu 2021-05-17T18:08:59.4217484Z Using PKG_LIBS=-lcurl 2021-05-17T18:08:59.4743068Z ** libs 2021-05-17T18:08:59.4796418Z rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o 2021-05-17T18:08:59.4825102Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callbacks.c -o callbacks.o 2021-05-17T18:08:59.5569458Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c curl.c -o curl.o 2021-05-17T18:08:59.6780938Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c download.c -o download.o 2021-05-17T18:08:59.7621251Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape.c -o escape.o 2021-05-17T18:08:59.8166762Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fetch.c -o fetch.o 2021-05-17T18:08:59.9164172Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c form.c -o form.o 2021-05-17T18:08:59.9857040Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getdate.c -o getdate.o 2021-05-17T18:09:00.0384274Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c handle.c -o handle.o 2021-05-17T18:09:00.3565897Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ieproxy.c -o ieproxy.o 2021-05-17T18:09:00.3941861Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:09:00.4490212Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c interrupt.c -o interrupt.o 2021-05-17T18:09:00.5132326Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c multi.c -o multi.o 2021-05-17T18:09:00.6806221Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c nslookup.c -o nslookup.o 2021-05-17T18:09:00.7434838Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c reflist.c -o reflist.o 2021-05-17T18:09:00.7965138Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-17T18:09:00.8378859Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-17T18:09:00.8825310Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typechecking.c -o typechecking.o 2021-05-17T18:09:00.9368607Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T18:09:01.0551956Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-17T18:09:01.1217653Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c winidn.c -o winidn.o 2021-05-17T18:09:01.1419622Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c writer.c -o writer.o 2021-05-17T18:09:01.1929286Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o -lcurl -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:09:01.2240952Z installing to /home/runner/work/_temp/Library/00LOCK-curl/00new/curl/libs 2021-05-17T18:09:01.2256744Z ** R 2021-05-17T18:09:01.2371593Z ** inst 2021-05-17T18:09:01.2406286Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:01.7404228Z ** help 2021-05-17T18:09:01.7868684Z *** installing help indices 2021-05-17T18:09:01.8202886Z ** building package indices 2021-05-17T18:09:02.0248436Z ** installing vignettes 2021-05-17T18:09:02.0319430Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:02.2105381Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:09:02.2284097Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:02.4131917Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:02.4142927Z * DONE (curl) 2021-05-17T18:09:02.7245016Z * installing *source* package ‘jsonlite’ ... 2021-05-17T18:09:02.7296885Z ** package ‘jsonlite’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:02.7298128Z ** using staged installation 2021-05-17T18:09:02.7427115Z ** libs 2021-05-17T18:09:02.7484929Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T18:09:02.8132800Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_array.c -o collapse_array.o 2021-05-17T18:09:02.8671523Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_object.c -o collapse_object.o 2021-05-17T18:09:02.9272271Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o 2021-05-17T18:09:03.0303724Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c escape_chars.c -o escape_chars.o 2021-05-17T18:09:03.0959293Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o 2021-05-17T18:09:03.1418136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_datelist.c -o is_datelist.o 2021-05-17T18:09:03.1867007Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o 2021-05-17T18:09:03.2384452Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o 2021-05-17T18:09:03.2866757Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o 2021-05-17T18:09:03.4091500Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c null_to_na.c -o null_to_na.o 2021-05-17T18:09:03.4728638Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c num_to_char.c -o num_to_char.o 2021-05-17T18:09:03.5508513Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parse.c -o parse.o 2021-05-17T18:09:03.6194421Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c prettify.c -o prettify.o 2021-05-17T18:09:03.6854687Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c push_parser.c -o push_parser.o 2021-05-17T18:09:03.7412567Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c r-base64.c -o r-base64.o 2021-05-17T18:09:03.7945205Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o 2021-05-17T18:09:03.8382702Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c row_collapse.c -o row_collapse.o 2021-05-17T18:09:03.9023942Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c transpose_list.c -o transpose_list.o 2021-05-17T18:09:03.9518852Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c validate.c -o validate.o 2021-05-17T18:09:04.0000782Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o 2021-05-17T18:09:04.0583266Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o 2021-05-17T18:09:04.0887126Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o 2021-05-17T18:09:04.1343088Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o 2021-05-17T18:09:04.2285969Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o 2021-05-17T18:09:04.4568071Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o 2021-05-17T18:09:04.7063932Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o 2021-05-17T18:09:04.8682598Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o 2021-05-17T18:09:05.0024019Z ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o 2021-05-17T18:09:05.0184301Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:09:05.0500914Z installing to /home/runner/work/_temp/Library/00LOCK-jsonlite/00new/jsonlite/libs 2021-05-17T18:09:05.0506784Z ** R 2021-05-17T18:09:05.0674738Z ** inst 2021-05-17T18:09:05.0692619Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:06.0480970Z in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” 2021-05-17T18:09:06.0482998Z ** help 2021-05-17T18:09:06.0784344Z *** installing help indices 2021-05-17T18:09:06.1035032Z ** building package indices 2021-05-17T18:09:06.2995659Z ** installing vignettes 2021-05-17T18:09:06.3070858Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:06.4943014Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:09:06.5159751Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:06.7428400Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:06.7429362Z * DONE (jsonlite) 2021-05-17T18:09:06.9506808Z * installing *source* package ‘ini’ ... 2021-05-17T18:09:06.9519120Z ** package ‘ini’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:06.9522969Z ** using staged installation 2021-05-17T18:09:06.9629351Z ** R 2021-05-17T18:09:06.9654570Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:07.1979619Z ** help 2021-05-17T18:09:07.2096506Z *** installing help indices 2021-05-17T18:09:07.2321632Z ** building package indices 2021-05-17T18:09:07.4110378Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:07.5795757Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:07.7469538Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:07.7474594Z * DONE (ini) 2021-05-17T18:09:07.9746150Z * installing *source* package ‘gitcreds’ ... 2021-05-17T18:09:07.9764347Z ** package ‘gitcreds’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:07.9765614Z ** using staged installation 2021-05-17T18:09:07.9869175Z ** R 2021-05-17T18:09:07.9925529Z ** inst 2021-05-17T18:09:07.9935706Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:08.4614308Z ** help 2021-05-17T18:09:08.4860401Z *** installing help indices 2021-05-17T18:09:08.5079165Z ** building package indices 2021-05-17T18:09:08.6964534Z ** installing vignettes 2021-05-17T18:09:08.7017915Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:08.8700932Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:09.0387765Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:09.0396198Z * DONE (gitcreds) 2021-05-17T18:09:09.2743257Z * installing *source* package ‘zip’ ... 2021-05-17T18:09:09.2767263Z ** package ‘zip’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:09.2768506Z ** using staged installation 2021-05-17T18:09:09.2862522Z ** libs 2021-05-17T18:09:09.2910315Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdzip.c -o tools/cmdzip 2021-05-17T18:09:11.8771766Z gcc -g -O2 miniz.c zip.c unixutils.c tools/cmdunzip.c -o tools/cmdunzip 2021-05-17T18:09:14.4499622Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:09:14.4930046Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c miniz.c -o miniz.o 2021-05-17T18:09:16.8439162Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rzip.c -o rzip.o 2021-05-17T18:09:16.9354699Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c zip.c -o zip.o 2021-05-17T18:09:17.0607915Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unixutils.c -o unixutils.o 2021-05-17T18:09:17.1201730Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o zip.so init.o miniz.o rzip.o zip.o unixutils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:09:17.1460418Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-zip/00new/zip 2021-05-17T18:09:17.1502331Z ** R 2021-05-17T18:09:17.1540125Z ** inst 2021-05-17T18:09:17.1549965Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:17.4616084Z ** help 2021-05-17T18:09:17.4822409Z *** installing help indices 2021-05-17T18:09:17.5051594Z ** building package indices 2021-05-17T18:09:17.6896113Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:17.8636171Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:09:17.8814322Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:18.0522312Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:18.0528650Z * DONE (zip) 2021-05-17T18:09:18.3271825Z * installing *source* package ‘rstudioapi’ ... 2021-05-17T18:09:18.3309244Z ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:18.3310518Z ** using staged installation 2021-05-17T18:09:18.3427399Z ** R 2021-05-17T18:09:18.3523442Z ** inst 2021-05-17T18:09:18.3540144Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:18.8409742Z ** help 2021-05-17T18:09:19.0005044Z *** installing help indices 2021-05-17T18:09:19.1110843Z *** copying figures 2021-05-17T18:09:19.1113933Z ** building package indices 2021-05-17T18:09:19.3908380Z ** installing vignettes 2021-05-17T18:09:19.3982129Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:19.5727170Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:19.7465599Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:19.7475597Z * DONE (rstudioapi) 2021-05-17T18:09:19.9620442Z * installing *source* package ‘fastmap’ ... 2021-05-17T18:09:19.9635904Z ** package ‘fastmap’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:19.9637173Z ** using staged installation 2021-05-17T18:09:19.9799877Z ** libs 2021-05-17T18:09:19.9850818Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -DR_NO_REMAP -fpic -g -O2 -c fastmap.cpp -o fastmap.o 2021-05-17T18:09:21.8397210Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Ilib/ -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:09:21.8848409Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fastmap.so fastmap.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:09:21.9460797Z installing to /home/runner/work/_temp/Library/00LOCK-fastmap/00new/fastmap/libs 2021-05-17T18:09:21.9470909Z ** R 2021-05-17T18:09:21.9518534Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:22.3425629Z ** help 2021-05-17T18:09:22.3595725Z *** installing help indices 2021-05-17T18:09:22.3776841Z ** building package indices 2021-05-17T18:09:22.5616549Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:22.7376873Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:09:22.7558999Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:22.9320083Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:22.9327857Z * DONE (fastmap) 2021-05-17T18:09:23.1681867Z * installing *source* package ‘yaml’ ... 2021-05-17T18:09:23.1704746Z ** package ‘yaml’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:23.1705964Z ** using staged installation 2021-05-17T18:09:23.1793686Z ** libs 2021-05-17T18:09:23.1842582Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o 2021-05-17T18:09:23.4986723Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o 2021-05-17T18:09:23.6040384Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o 2021-05-17T18:09:24.4880805Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o 2021-05-17T18:09:24.6440236Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o 2021-05-17T18:09:24.7663513Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o 2021-05-17T18:09:25.1027870Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_emit.c -o r_emit.o 2021-05-17T18:09:25.3761932Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_ext.c -o r_ext.o 2021-05-17T18:09:25.4753999Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r_parse.c -o r_parse.o 2021-05-17T18:09:25.8696802Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o 2021-05-17T18:09:25.9725163Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o 2021-05-17T18:09:27.2171875Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o 2021-05-17T18:09:27.2757776Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:09:27.3046527Z installing to /home/runner/work/_temp/Library/00LOCK-yaml/00new/yaml/libs 2021-05-17T18:09:27.3065669Z ** R 2021-05-17T18:09:27.3093412Z ** inst 2021-05-17T18:09:27.3106681Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:27.5453957Z ** help 2021-05-17T18:09:27.5649909Z *** installing help indices 2021-05-17T18:09:27.5884361Z ** building package indices 2021-05-17T18:09:27.7757032Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:27.9486090Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:09:27.9668674Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:28.1386546Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:28.1393098Z * DONE (yaml) 2021-05-17T18:09:28.3896794Z * installing *source* package ‘withr’ ... 2021-05-17T18:09:28.3921709Z ** package ‘withr’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:28.3922980Z ** using staged installation 2021-05-17T18:09:28.4069457Z ** R 2021-05-17T18:09:28.4150626Z ** inst 2021-05-17T18:09:28.4159381Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:29.0216093Z ** help 2021-05-17T18:09:29.0975772Z *** installing help indices 2021-05-17T18:09:29.1517309Z *** copying figures 2021-05-17T18:09:29.1519294Z ** building package indices 2021-05-17T18:09:29.3745806Z ** installing vignettes 2021-05-17T18:09:29.3811770Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:29.5502127Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:29.7281792Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:29.7282814Z * DONE (withr) 2021-05-17T18:09:29.9510807Z * installing *source* package ‘whisker’ ... 2021-05-17T18:09:29.9526773Z ** package ‘whisker’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:29.9528026Z ** using staged installation 2021-05-17T18:09:29.9617676Z ** R 2021-05-17T18:09:29.9657298Z ** inst 2021-05-17T18:09:29.9675177Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:30.3485449Z ** help 2021-05-17T18:09:30.3695332Z *** installing help indices 2021-05-17T18:09:30.3916449Z ** building package indices 2021-05-17T18:09:30.5826857Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:30.7514329Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:30.9196962Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:30.9204712Z * DONE (whisker) 2021-05-17T18:09:31.1292707Z * installing *source* package ‘rappdirs’ ... 2021-05-17T18:09:31.1303854Z ** package ‘rappdirs’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:31.1304978Z ** using staged installation 2021-05-17T18:09:31.1527466Z ** libs 2021-05-17T18:09:31.1568407Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:09:31.2008251Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c win-path.c -o win-path.o 2021-05-17T18:09:31.2455448Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o rappdirs.so init.o win-path.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:09:31.2605961Z installing to /home/runner/work/_temp/Library/00LOCK-rappdirs/00new/rappdirs/libs 2021-05-17T18:09:31.2617977Z ** R 2021-05-17T18:09:31.2659382Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:09:31.5527267Z ** help 2021-05-17T18:09:31.5762951Z *** installing help indices 2021-05-17T18:09:31.5967086Z ** building package indices 2021-05-17T18:09:31.7873408Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:09:31.9574106Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:09:31.9750122Z ** testing if installed package can be loaded from final location 2021-05-17T18:09:32.1436301Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:09:32.1443036Z * DONE (rappdirs) 2021-05-17T18:09:32.5939277Z * installing *source* package ‘fs’ ... 2021-05-17T18:09:32.6068048Z ** package ‘fs’ successfully unpacked and MD5 sums checked 2021-05-17T18:09:32.6069390Z ** using staged installation 2021-05-17T18:09:32.6225725Z ** libs 2021-05-17T18:09:32.6287892Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c id.cc -o id.o 2021-05-17T18:09:33.1449240Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c file.cc -o file.o 2021-05-17T18:09:33.5496184Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c path.cc -o path.o 2021-05-17T18:09:33.9282353Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c fs.cc -o fs.o 2021-05-17T18:09:34.0059742Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c link.cc -o link.o 2021-05-17T18:09:34.2920650Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c utils.cc -o utils.o 2021-05-17T18:09:34.5807774Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c init.cc -o init.o 2021-05-17T18:09:34.6647947Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c dir.cc -o dir.o 2021-05-17T18:09:35.0712286Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c getmode.cc -o getmode.o 2021-05-17T18:09:35.3406774Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c error.cc -o error.o 2021-05-17T18:09:35.4364301Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c unix/getmode.cc -o unix/getmode.o 2021-05-17T18:09:35.7294660Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/setmode.c -o bsd/setmode.o 2021-05-17T18:09:35.8510717Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/strmode.c -o bsd/strmode.o 2021-05-17T18:09:35.8913451Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I./libuv-1.38.1/include -I. -pthread -I/usr/local/include -fpic -g -O2 -c bsd/reallocarray.c -o bsd/reallocarray.o 2021-05-17T18:09:35.9212343Z (cd libuv-1.38.1 \ 2021-05-17T18:09:35.9214471Z && CC="gcc" CFLAGS="-g -O2 -I/usr/local/include -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/local/lib" ./configure --quiet) 2021-05-17T18:09:40.3668074Z make --directory=libuv-1.38.1 \ 2021-05-17T18:09:40.3669079Z HAVE_DTRACE=0 2021-05-17T18:09:40.3761787Z make[1]: Entering directory '/tmp/Rtmp5jEgqX/R.INSTALL792e560874d/fs/src/libuv-1.38.1' 2021-05-17T18:09:40.3853853Z CC src/libuv_la-fs-poll.lo 2021-05-17T18:09:40.9727902Z CC src/libuv_la-idna.lo 2021-05-17T18:09:41.5733624Z CC src/libuv_la-inet.lo 2021-05-17T18:09:42.1963613Z CC src/libuv_la-random.lo 2021-05-17T18:09:42.7057261Z CC src/libuv_la-strscpy.lo 2021-05-17T18:09:43.1724856Z CC src/libuv_la-threadpool.lo 2021-05-17T18:09:43.8032139Z CC src/libuv_la-timer.lo 2021-05-17T18:09:44.3900656Z CC src/libuv_la-uv-data-getter-setters.lo 2021-05-17T18:09:44.8977230Z CC src/libuv_la-uv-common.lo 2021-05-17T18:09:45.9314808Z CC src/libuv_la-version.lo 2021-05-17T18:09:46.3977575Z CC src/unix/libuv_la-async.lo 2021-05-17T18:09:46.9789875Z CC src/unix/libuv_la-core.lo 2021-05-17T18:09:48.0988592Z CC src/unix/libuv_la-dl.lo 2021-05-17T18:09:48.5925086Z CC src/unix/libuv_la-fs.lo 2021-05-17T18:09:50.0303205Z CC src/unix/libuv_la-getaddrinfo.lo 2021-05-17T18:09:50.6031726Z CC src/unix/libuv_la-getnameinfo.lo 2021-05-17T18:09:51.1125977Z CC src/unix/libuv_la-loop-watcher.lo 2021-05-17T18:09:51.6928443Z CC src/unix/libuv_la-loop.lo 2021-05-17T18:09:52.2532984Z CC src/unix/libuv_la-pipe.lo 2021-05-17T18:09:53.0290306Z CC src/unix/libuv_la-poll.lo 2021-05-17T18:09:53.4091788Z CC src/unix/libuv_la-process.lo 2021-05-17T18:09:54.1509134Z CC src/unix/libuv_la-random-devurandom.lo 2021-05-17T18:09:54.6677158Z CC src/unix/libuv_la-signal.lo 2021-05-17T18:09:55.5306023Z CC src/unix/libuv_la-stream.lo 2021-05-17T18:09:56.5400405Z CC src/unix/libuv_la-tcp.lo 2021-05-17T18:09:57.1758489Z CC src/unix/libuv_la-thread.lo 2021-05-17T18:09:57.8822220Z CC src/unix/libuv_la-tty.lo 2021-05-17T18:09:58.4647490Z CC src/unix/libuv_la-udp.lo 2021-05-17T18:09:59.4585159Z CC src/unix/libuv_la-linux-core.lo 2021-05-17T18:10:00.4605743Z CC src/unix/libuv_la-linux-inotify.lo 2021-05-17T18:10:01.2549855Z CC src/unix/libuv_la-linux-syscalls.lo 2021-05-17T18:10:01.7035242Z CC src/unix/libuv_la-procfs-exepath.lo 2021-05-17T18:10:02.2081397Z CC src/unix/libuv_la-proctitle.lo 2021-05-17T18:10:02.7527746Z CC src/unix/libuv_la-random-getrandom.lo 2021-05-17T18:10:03.2411590Z CC src/unix/libuv_la-random-sysctl-linux.lo 2021-05-17T18:10:03.7546553Z CCLD libuv.la 2021-05-17T18:10:03.9512881Z ar: `u' modifier ignored since `D' is the default (see `U') 2021-05-17T18:10:03.9917044Z make[1]: Leaving directory '/tmp/Rtmp5jEgqX/R.INSTALL792e560874d/fs/src/libuv-1.38.1' 2021-05-17T18:10:03.9937987Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fs.so id.o file.o path.o fs.o link.o utils.o init.o dir.o getmode.o error.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.38.1/.libs/libuv.a -pthread -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:10:04.0809910Z installing to /home/runner/work/_temp/Library/00LOCK-fs/00new/fs/libs 2021-05-17T18:10:04.0840052Z ** R 2021-05-17T18:10:04.0936098Z ** inst 2021-05-17T18:10:04.0947149Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:05.0617737Z ** help 2021-05-17T18:10:05.1291097Z *** installing help indices 2021-05-17T18:10:05.1780215Z ** building package indices 2021-05-17T18:10:05.3970919Z ** installing vignettes 2021-05-17T18:10:05.4076269Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:05.6289587Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:10:05.6478715Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:05.8828979Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:05.8839885Z * DONE (fs) 2021-05-17T18:10:06.1118907Z * installing *source* package ‘clipr’ ... 2021-05-17T18:10:06.1131030Z ** package ‘clipr’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:06.1132143Z ** using staged installation 2021-05-17T18:10:06.1339511Z ** R 2021-05-17T18:10:06.1378294Z ** inst 2021-05-17T18:10:06.1387571Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:06.4524330Z ** help 2021-05-17T18:10:06.4728486Z *** installing help indices 2021-05-17T18:10:06.4932545Z ** building package indices 2021-05-17T18:10:06.6792965Z ** installing vignettes 2021-05-17T18:10:06.6845006Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:06.8540856Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:07.0227622Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:07.0234143Z * DONE (clipr) 2021-05-17T18:10:07.7329722Z * installing *source* package ‘git2r’ ... 2021-05-17T18:10:07.7570213Z ** package ‘git2r’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:07.7573197Z ** using staged installation 2021-05-17T18:10:07.9260986Z checking build system type... x86_64-unknown-linux-gnu 2021-05-17T18:10:07.9262587Z checking host system type... x86_64-unknown-linux-gnu 2021-05-17T18:10:07.9268390Z checking for gcc... gcc 2021-05-17T18:10:07.9821569Z checking whether the C compiler works... yes 2021-05-17T18:10:07.9822948Z checking for C compiler default output file name... a.out 2021-05-17T18:10:08.0157676Z checking for suffix of executables... 2021-05-17T18:10:08.0539792Z checking whether we are cross compiling... no 2021-05-17T18:10:08.0754025Z checking for suffix of object files... o 2021-05-17T18:10:08.0951541Z checking whether we are using the GNU C compiler... yes 2021-05-17T18:10:08.1148751Z checking whether gcc accepts -g... yes 2021-05-17T18:10:08.1478396Z checking for gcc option to accept ISO C89... none needed 2021-05-17T18:10:08.1485764Z checking for pkg-config... /usr/bin/pkg-config 2021-05-17T18:10:08.1500293Z checking pkg-config is at least version 0.9.0... yes 2021-05-17T18:10:08.1622409Z Found pkg-config cflags and libs! 2021-05-17T18:10:08.2499762Z checking whether the libgit2 version will work in git2r... yes 2021-05-17T18:10:08.3673485Z checking whether the libgit2 function git_buf_dispose is available... yes 2021-05-17T18:10:08.4832480Z checking whether the libgit2 constant GIT_OBJECT_ANY is available... yes 2021-05-17T18:10:08.5995310Z checking whether the libgit2 function git_error_last is available... yes 2021-05-17T18:10:08.7005690Z checking whether the libgit2 function git_oid_is_zero is available... no 2021-05-17T18:10:08.7007994Z ----- Results of the git2r package configure ----- 2021-05-17T18:10:08.7008427Z 2021-05-17T18:10:08.7009299Z PKG_CFLAGS: -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR 2021-05-17T18:10:08.7010108Z PKG_LIBS: -lgit2 2021-05-17T18:10:08.7010380Z 2021-05-17T18:10:08.7011005Z -------------------------------------------------- 2021-05-17T18:10:08.7219086Z configure: creating ./config.status 2021-05-17T18:10:08.7945107Z config.status: creating src/Makevars 2021-05-17T18:10:08.8496272Z ** libs 2021-05-17T18:10:08.8554227Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r.c -o git2r.o 2021-05-17T18:10:08.9178676Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_S3.c -o git2r_S3.o 2021-05-17T18:10:08.9657318Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o 2021-05-17T18:10:09.1135884Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o 2021-05-17T18:10:09.2006232Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o 2021-05-17T18:10:09.3194226Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o 2021-05-17T18:10:09.5382410Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o 2021-05-17T18:10:09.6251211Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o 2021-05-17T18:10:09.7090815Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o 2021-05-17T18:10:09.8503451Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_config.c -o git2r_config.o 2021-05-17T18:10:09.9984109Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o 2021-05-17T18:10:10.0851862Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o 2021-05-17T18:10:10.3194857Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_error.c -o git2r_error.o 2021-05-17T18:10:10.3814986Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o 2021-05-17T18:10:10.4607710Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_index.c -o git2r_index.o 2021-05-17T18:10:10.5421449Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o 2021-05-17T18:10:10.6172390Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o 2021-05-17T18:10:10.7821414Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_note.c -o git2r_note.o 2021-05-17T18:10:10.9047732Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_object.c -o git2r_object.o 2021-05-17T18:10:10.9817414Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o 2021-05-17T18:10:11.1343776Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o 2021-05-17T18:10:11.1958054Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_push.c -o git2r_push.o 2021-05-17T18:10:11.2730716Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o 2021-05-17T18:10:11.3620654Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o 2021-05-17T18:10:11.4427382Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o 2021-05-17T18:10:11.6057232Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o 2021-05-17T18:10:11.7502194Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o 2021-05-17T18:10:11.8273229Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o 2021-05-17T18:10:11.9009461Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o 2021-05-17T18:10:12.0676582Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o 2021-05-17T18:10:12.1431993Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o 2021-05-17T18:10:12.2513355Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_status.c -o git2r_status.o 2021-05-17T18:10:12.3992223Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o 2021-05-17T18:10:12.5172453Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o 2021-05-17T18:10:12.5790480Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -DGIT2R_HAVE_BUF_DISPOSE -DGIT2R_HAVE_OBJECT_ANY -DGIT2R_HAVE_GIT_ERROR -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o 2021-05-17T18:10:12.6866780Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o git2r.so git2r.o git2r_S3.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:10:12.7250317Z installing to /home/runner/work/_temp/Library/00LOCK-git2r/00new/git2r/libs 2021-05-17T18:10:12.7269546Z ** R 2021-05-17T18:10:12.7459793Z ** inst 2021-05-17T18:10:12.7468699Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:13.6587506Z ** help 2021-05-17T18:10:13.8909075Z *** installing help indices 2021-05-17T18:10:14.0806759Z ** building package indices 2021-05-17T18:10:14.4098839Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:14.5973963Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:10:14.6156938Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:14.8189408Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:14.8202382Z * DONE (git2r) 2021-05-17T18:10:15.0327016Z * installing *source* package ‘askpass’ ... 2021-05-17T18:10:15.0335723Z ** package ‘askpass’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:15.0336729Z ** using staged installation 2021-05-17T18:10:15.0470692Z ** libs 2021-05-17T18:10:15.0519518Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c askpass.c -o askpass.o 2021-05-17T18:10:15.1019226Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o askpass.so askpass.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:10:15.1230486Z installing to /home/runner/work/_temp/Library/00LOCK-askpass/00new/askpass/libs 2021-05-17T18:10:15.1244436Z ** R 2021-05-17T18:10:15.1272716Z ** inst 2021-05-17T18:10:15.1281187Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:15.3744733Z ** help 2021-05-17T18:10:15.3919880Z *** installing help indices 2021-05-17T18:10:15.4059989Z ** building package indices 2021-05-17T18:10:15.5894393Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:15.7612342Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:10:15.7782581Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:15.9456796Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:15.9462434Z * DONE (askpass) 2021-05-17T18:10:16.2742346Z * installing *source* package ‘cli’ ... 2021-05-17T18:10:16.2798362Z ** package ‘cli’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:16.2799512Z ** using staged installation 2021-05-17T18:10:16.2985639Z ** R 2021-05-17T18:10:16.3245356Z ** inst 2021-05-17T18:10:16.3257532Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:18.8241993Z ** help 2021-05-17T18:10:19.0123828Z *** installing help indices 2021-05-17T18:10:19.1426122Z *** copying figures 2021-05-17T18:10:19.1428211Z ** building package indices 2021-05-17T18:10:19.4422809Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:19.6614288Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:19.9278188Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:19.9307944Z * DONE (cli) 2021-05-17T18:10:20.2487367Z * installing *source* package ‘purrr’ ... 2021-05-17T18:10:20.2537539Z ** package ‘purrr’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:20.2539162Z ** using staged installation 2021-05-17T18:10:20.2686020Z ** libs 2021-05-17T18:10:20.2735867Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c backports.c -o backports.o 2021-05-17T18:10:20.3112156Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-17T18:10:20.3997453Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-17T18:10:20.4852322Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c flatten.c -o flatten.o 2021-05-17T18:10:20.5927110Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:10:20.6368449Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c map.c -o map.o 2021-05-17T18:10:20.7532955Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pluck.c -o pluck.o 2021-05-17T18:10:20.8827601Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c transpose.c -o transpose.o 2021-05-17T18:10:20.9680449Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T18:10:21.0213914Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o purrr.so backports.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:10:21.0470457Z installing to /home/runner/work/_temp/Library/00LOCK-purrr/00new/purrr/libs 2021-05-17T18:10:21.0484405Z ** R 2021-05-17T18:10:21.0646951Z ** inst 2021-05-17T18:10:21.0656688Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:22.2690317Z ** help 2021-05-17T18:10:22.4343229Z *** installing help indices 2021-05-17T18:10:22.5356132Z *** copying figures 2021-05-17T18:10:22.5360496Z ** building package indices 2021-05-17T18:10:22.8047574Z ** installing vignettes 2021-05-17T18:10:22.8126317Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:23.0102530Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:10:23.0275655Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:23.2467612Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:23.2482449Z * DONE (purrr) 2021-05-17T18:10:23.5059667Z * installing *source* package ‘lifecycle’ ... 2021-05-17T18:10:23.5085136Z ** package ‘lifecycle’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:23.5086424Z ** using staged installation 2021-05-17T18:10:23.5227468Z ** R 2021-05-17T18:10:23.5272487Z ** inst 2021-05-17T18:10:23.5284652Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:23.9340044Z ** help 2021-05-17T18:10:23.9660136Z *** installing help indices 2021-05-17T18:10:23.9905362Z *** copying figures 2021-05-17T18:10:23.9910306Z ** building package indices 2021-05-17T18:10:24.1939708Z ** installing vignettes 2021-05-17T18:10:24.1941088Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:24.3886826Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:24.5818036Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:24.5826475Z * DONE (lifecycle) 2021-05-17T18:10:24.7931834Z * installing *source* package ‘cachem’ ... 2021-05-17T18:10:24.7944343Z ** package ‘cachem’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:24.7946492Z ** using staged installation 2021-05-17T18:10:24.8075953Z ** libs 2021-05-17T18:10:24.8126945Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cache.c -o cache.o 2021-05-17T18:10:24.8627798Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:10:24.9089612Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o cachem.so cache.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:10:24.9305786Z installing to /home/runner/work/_temp/Library/00LOCK-cachem/00new/cachem/libs 2021-05-17T18:10:24.9320435Z ** R 2021-05-17T18:10:24.9447944Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:25.4673303Z ** help 2021-05-17T18:10:25.4900436Z *** installing help indices 2021-05-17T18:10:25.5093459Z ** building package indices 2021-05-17T18:10:25.7043551Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:25.9019947Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:10:25.9193797Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:26.1187896Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:26.1194831Z * DONE (cachem) 2021-05-17T18:10:26.5667335Z * installing *source* package ‘openssl’ ... 2021-05-17T18:10:26.5791176Z ** package ‘openssl’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:26.5792798Z ** using staged installation 2021-05-17T18:10:26.5931784Z Found pkg-config cflags and libs! 2021-05-17T18:10:26.6774945Z Using PKG_CFLAGS= 2021-05-17T18:10:26.8341211Z Using PKG_LIBS=-l:libssl.so.1.1 -l:libcrypto.so.1.1 2021-05-17T18:10:26.8496813Z ** libs 2021-05-17T18:10:26.8555883Z rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-17T18:10:26.8581118Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-17T18:10:26.9420532Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T18:10:27.0199488Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o 2021-05-17T18:10:27.1214999Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o 2021-05-17T18:10:27.2734720Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o 2021-05-17T18:10:27.3385625Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o 2021-05-17T18:10:27.4318706Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o 2021-05-17T18:10:27.5487427Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o 2021-05-17T18:10:27.6030432Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o 2021-05-17T18:10:27.6990772Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o 2021-05-17T18:10:27.7647086Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o 2021-05-17T18:10:27.8664562Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o 2021-05-17T18:10:27.9956793Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o 2021-05-17T18:10:28.0842332Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o 2021-05-17T18:10:28.2682404Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o 2021-05-17T18:10:28.3219565Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pbkdf.c -o pbkdf.o 2021-05-17T18:10:28.3654424Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o 2021-05-17T18:10:28.4942549Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o 2021-05-17T18:10:28.6350543Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o 2021-05-17T18:10:28.7582804Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o 2021-05-17T18:10:28.8034582Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o 2021-05-17T18:10:28.8992901Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o 2021-05-17T18:10:29.0166816Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o 2021-05-17T18:10:29.1586605Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o 2021-05-17T18:10:29.2734198Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o 2021-05-17T18:10:29.4020445Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x25519.c -o x25519.o 2021-05-17T18:10:29.5291302Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o 2021-05-17T18:10:29.5934115Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bcrypt/blowfish.c -o bcrypt/blowfish.o 2021-05-17T18:10:29.7682510Z ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o 2021-05-17T18:10:29.7738040Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.1.1 -l:libcrypto.so.1.1 -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:10:29.8296290Z installing to /home/runner/work/_temp/Library/00LOCK-openssl/00new/openssl/libs 2021-05-17T18:10:29.8313406Z ** R 2021-05-17T18:10:29.8415724Z ** inst 2021-05-17T18:10:29.8463806Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:30.7599091Z ** help 2021-05-17T18:10:30.8114107Z *** installing help indices 2021-05-17T18:10:30.8481786Z ** building package indices 2021-05-17T18:10:31.0597781Z ** installing vignettes 2021-05-17T18:10:31.0746853Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:31.2574855Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:10:31.2753923Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:31.4665524Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:31.4679379Z * DONE (openssl) 2021-05-17T18:10:31.6781461Z * installing *source* package ‘memoise’ ... 2021-05-17T18:10:31.6793768Z ** package ‘memoise’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:31.6795413Z ** using staged installation 2021-05-17T18:10:31.6946431Z ** R 2021-05-17T18:10:31.7048065Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:32.0820924Z ** help 2021-05-17T18:10:32.1071332Z *** installing help indices 2021-05-17T18:10:32.1307855Z ** building package indices 2021-05-17T18:10:32.3216975Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:32.5096473Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:32.6998642Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:32.7004485Z * DONE (memoise) 2021-05-17T18:10:33.0082374Z * installing *source* package ‘httr’ ... 2021-05-17T18:10:33.0129440Z ** package ‘httr’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:33.0130528Z ** using staged installation 2021-05-17T18:10:33.0278637Z ** R 2021-05-17T18:10:33.0443428Z ** demo 2021-05-17T18:10:33.0454180Z ** inst 2021-05-17T18:10:33.0467393Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:35.5199641Z ** help 2021-05-17T18:10:35.6737150Z *** installing help indices 2021-05-17T18:10:35.7788951Z ** building package indices 2021-05-17T18:10:36.0582637Z ** installing vignettes 2021-05-17T18:10:36.0651706Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:36.2445565Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:36.4670897Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:36.4698343Z * DONE (httr) 2021-05-17T18:10:36.7011480Z * installing *source* package ‘credentials’ ... 2021-05-17T18:10:36.7031736Z ** package ‘credentials’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:36.7035529Z ** using staged installation 2021-05-17T18:10:36.7171891Z ** R 2021-05-17T18:10:36.7217752Z ** inst 2021-05-17T18:10:36.7231035Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:37.1512887Z ** help 2021-05-17T18:10:37.1694743Z *** installing help indices 2021-05-17T18:10:37.1893382Z ** building package indices 2021-05-17T18:10:37.3819767Z ** installing vignettes 2021-05-17T18:10:37.3827233Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:37.6410587Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:37.8766777Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:37.8779137Z * DONE (credentials) 2021-05-17T18:10:38.1099687Z * installing *source* package ‘gh’ ... 2021-05-17T18:10:38.1116214Z ** package ‘gh’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:38.1117434Z ** using staged installation 2021-05-17T18:10:38.1259312Z ** R 2021-05-17T18:10:38.1336222Z ** inst 2021-05-17T18:10:38.1345410Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:39.1474377Z ** help 2021-05-17T18:10:39.1762739Z *** installing help indices 2021-05-17T18:10:39.2060421Z ** building package indices 2021-05-17T18:10:39.3990985Z ** installing vignettes 2021-05-17T18:10:39.4044965Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:39.6423704Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:39.8902461Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:39.8915109Z * DONE (gh) 2021-05-17T18:10:40.1416962Z * installing *source* package ‘gert’ ... 2021-05-17T18:10:40.1441762Z ** package ‘gert’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:40.1443029Z ** using staged installation 2021-05-17T18:10:40.1531052Z Found pkg-config cflags and libs! 2021-05-17T18:10:40.2346450Z Using PKG_CFLAGS= 2021-05-17T18:10:40.2348398Z Using PKG_LIBS=-lgit2 2021-05-17T18:10:40.2707892Z Configuration OK! 2021-05-17T18:10:40.2866146Z ** libs 2021-05-17T18:10:40.2914927Z rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o 2021-05-17T18:10:40.2940472Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c branch.c -o branch.o 2021-05-17T18:10:40.4925992Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c clone.c -o clone.o 2021-05-17T18:10:40.7110060Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c commit.c -o commit.o 2021-05-17T18:10:40.9239216Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c config.c -o config.o 2021-05-17T18:10:41.0050570Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conflicts.c -o conflicts.o 2021-05-17T18:10:41.0749175Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c files.c -o files.o 2021-05-17T18:10:41.2141980Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:10:41.2743915Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c merge.c -o merge.o 2021-05-17T18:10:41.3711686Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rebase.c -o rebase.o 2021-05-17T18:10:41.4782094Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stash.c -o stash.o 2021-05-17T18:10:41.5594805Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c submodules.c -o submodules.o 2021-05-17T18:10:41.6670010Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tag.c -o tag.o 2021-05-17T18:10:41.7491653Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T18:10:41.8663291Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-17T18:10:41.9402635Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o gert.so branch.o clone.o commit.o config.o conflicts.o files.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o -lgit2 -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:10:41.9741317Z installing to /home/runner/work/_temp/Library/00LOCK-gert/00new/gert/libs 2021-05-17T18:10:41.9742670Z ** R 2021-05-17T18:10:41.9797689Z ** inst 2021-05-17T18:10:41.9806687Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:42.6779893Z ** help 2021-05-17T18:10:42.7368079Z *** installing help indices 2021-05-17T18:10:42.7793527Z ** building package indices 2021-05-17T18:10:42.9949905Z ** installing vignettes 2021-05-17T18:10:43.0042682Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:43.2195488Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:10:43.2368129Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:43.4596457Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:43.4607501Z * DONE (gert) 2021-05-17T18:10:43.8496288Z * installing *source* package ‘usethis’ ... 2021-05-17T18:10:43.8572041Z ** package ‘usethis’ successfully unpacked and MD5 sums checked 2021-05-17T18:10:43.8573309Z ** using staged installation 2021-05-17T18:10:43.8804570Z ** R 2021-05-17T18:10:43.9131637Z ** inst 2021-05-17T18:10:43.9163664Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:10:46.5758450Z ** help 2021-05-17T18:10:46.7645099Z *** installing help indices 2021-05-17T18:10:46.8922992Z *** copying figures 2021-05-17T18:10:46.8927494Z ** building package indices 2021-05-17T18:10:47.1896648Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:47.4670541Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:47.7883459Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:47.7913583Z * DONE (usethis) 2021-05-17T18:10:47.8022159Z 2021-05-17T18:10:47.8023339Z The downloaded source packages are in 2021-05-17T18:10:47.8024755Z ‘/tmp/RtmpmLgIuU/downloaded_packages’ 2021-05-17T18:10:47.8025623Z Running `R CMD build`... 2021-05-17T18:10:49.8706338Z * checking for file ‘/tmp/RtmpmLgIuU/remotes72845ebf59b5/ropensci-tic-3b4dfb8/DESCRIPTION’ ... OK 2021-05-17T18:10:49.8707706Z * preparing ‘tic’: 2021-05-17T18:10:49.8708622Z * checking DESCRIPTION meta-information ... OK 2021-05-17T18:10:49.8709592Z * installing the package to process help pages 2021-05-17T18:10:49.8710966Z * checking for LF line-endings in source and make files and shell scripts 2021-05-17T18:10:49.8711878Z * checking for empty or unneeded directories 2021-05-17T18:10:49.8712822Z Removed empty directory ‘tic/.circleci’ 2021-05-17T18:10:49.8713743Z Removed empty directory ‘tic/pkgdown’ 2021-05-17T18:10:49.8714550Z * building ‘tic_0.10.0.tar.gz’ 2021-05-17T18:10:49.8720575Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:10:49.8721765Z (as ‘lib’ is unspecified) 2021-05-17T18:10:50.2011902Z * installing *source* package ‘tic’ ... 2021-05-17T18:10:50.2040520Z ** using staged installation 2021-05-17T18:10:50.2269255Z ** R 2021-05-17T18:10:50.2453124Z ** inst 2021-05-17T18:10:50.2484976Z ** preparing package for lazy loading 2021-05-17T18:10:50.5939581Z ** help 2021-05-17T18:10:50.7442738Z *** installing help indices 2021-05-17T18:10:50.8379016Z *** copying figures 2021-05-17T18:10:50.8383601Z ** building package indices 2021-05-17T18:10:51.1007455Z ** installing vignettes 2021-05-17T18:10:51.1052997Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:10:51.3582526Z ** testing if installed package can be loaded from final location 2021-05-17T18:10:51.6614349Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:10:51.6647213Z * DONE (tic) 2021-05-17T18:10:51.6778314Z Using github PAT from envvar GITHUB_PAT 2021-05-17T18:10:51.8635416Z Downloading GitHub repo muschellij2/ghtravis@HEAD 2021-05-17T18:10:52.7101049Z desc (1.3.0 -> 7be86f2f7...) [GitHub] 2021-05-17T18:10:52.7102461Z utf8 (NA -> 1.2.1 ) [CRAN] 2021-05-17T18:10:52.7105087Z Installing 37 packages: utf8, vctrs, pkgconfig, pillar, tibble, rematch2, fansi, diffobj, waldo, ps, processx, praise, pkgload, evaluate, ellipsis, digest, callr, brio, xml2, xfun, markdown, highr, stringr, stringi, Rcpp, knitr, commonmark, brew, xopen, sessioninfo, prettyunits, pkgbuild, testthat, rversions, roxygen2, rcmdcheck, devtools 2021-05-17T18:10:52.7107570Z vctrs (NA -> 0.3.8 ) [CRAN] 2021-05-17T18:10:52.7108514Z pkgconfig (NA -> 2.0.3 ) [CRAN] 2021-05-17T18:10:52.7109451Z pillar (NA -> 1.6.1 ) [CRAN] 2021-05-17T18:10:52.7110563Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:10:52.7112199Z (as ‘lib’ is unspecified) 2021-05-17T18:10:52.7112980Z tibble (NA -> 3.1.2 ) [CRAN] 2021-05-17T18:10:52.7113972Z rematch2 (NA -> 2.1.2 ) [CRAN] 2021-05-17T18:10:52.7114843Z fansi (NA -> 0.4.2 ) [CRAN] 2021-05-17T18:10:52.7115721Z diffobj (NA -> 0.3.4 ) [CRAN] 2021-05-17T18:10:52.7116595Z waldo (NA -> 0.2.5 ) [CRAN] 2021-05-17T18:10:52.7117432Z ps (NA -> 1.6.0 ) [CRAN] 2021-05-17T18:10:52.7118314Z processx (NA -> 3.5.2 ) [CRAN] 2021-05-17T18:10:52.7119206Z praise (NA -> 1.0.0 ) [CRAN] 2021-05-17T18:10:52.7120098Z pkgload (NA -> 1.2.1 ) [CRAN] 2021-05-17T18:10:52.7121638Z evaluate (NA -> 0.14 ) [CRAN] 2021-05-17T18:10:52.7122402Z ellipsis (NA -> 0.3.2 ) [CRAN] 2021-05-17T18:10:52.7123131Z digest (NA -> 0.6.27 ) [CRAN] 2021-05-17T18:10:52.7123843Z callr (NA -> 3.7.0 ) [CRAN] 2021-05-17T18:10:52.7124528Z brio (NA -> 1.1.2 ) [CRAN] 2021-05-17T18:10:52.7125240Z xml2 (NA -> 1.3.2 ) [CRAN] 2021-05-17T18:10:52.7125938Z xfun (NA -> 0.23 ) [CRAN] 2021-05-17T18:10:52.7126644Z markdown (NA -> 1.1 ) [CRAN] 2021-05-17T18:10:52.7127373Z highr (NA -> 0.9 ) [CRAN] 2021-05-17T18:10:52.7128076Z stringr (NA -> 1.4.0 ) [CRAN] 2021-05-17T18:10:52.7128803Z stringi (NA -> 1.6.2 ) [CRAN] 2021-05-17T18:10:52.7129523Z Rcpp (NA -> 1.0.6 ) [CRAN] 2021-05-17T18:10:52.7130212Z knitr (NA -> 1.33 ) [CRAN] 2021-05-17T18:10:52.7130947Z commonmark (NA -> 1.7 ) [CRAN] 2021-05-17T18:10:52.7131680Z brew (NA -> 1.0-6 ) [CRAN] 2021-05-17T18:10:52.7132711Z xopen (NA -> 1.0.0 ) [CRAN] 2021-05-17T18:10:52.7133465Z sessioninfo (NA -> 1.1.1 ) [CRAN] 2021-05-17T18:10:52.7134234Z prettyunits (NA -> 1.1.1 ) [CRAN] 2021-05-17T18:10:52.7135008Z pkgbuild (NA -> 1.2.0 ) [CRAN] 2021-05-17T18:10:52.7135759Z testthat (NA -> 3.0.2 ) [CRAN] 2021-05-17T18:10:52.7136594Z rversions (NA -> 2.0.2 ) [CRAN] 2021-05-17T18:10:52.7137370Z roxygen2 (NA -> 7.1.1 ) [CRAN] 2021-05-17T18:10:52.7138128Z rcmdcheck (NA -> 1.3.3 ) [CRAN] 2021-05-17T18:10:52.7139364Z devtools (NA -> 2.4.1 ) [CRAN] 2021-05-17T18:11:06.8033858Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/utf8_1.2.1.tar.gz' 2021-05-17T18:11:07.0706011Z Content type 'binary/octet-stream' length 237667 bytes (232 KB) 2021-05-17T18:11:07.0862163Z ================================================== 2021-05-17T18:11:07.0863048Z downloaded 232 KB 2021-05-17T18:11:07.0863574Z 2021-05-17T18:11:07.0898296Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/vctrs_0.3.8.tar.gz' 2021-05-17T18:11:07.2619781Z Content type 'binary/octet-stream' length 784938 bytes (766 KB) 2021-05-17T18:11:07.2862478Z ================================================== 2021-05-17T18:11:07.2863136Z downloaded 766 KB 2021-05-17T18:11:07.2864157Z 2021-05-17T18:11:07.2900033Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgconfig_2.0.3.tar.gz' 2021-05-17T18:11:07.5238838Z Content type 'application/x-tar' length 6108 bytes 2021-05-17T18:11:07.5240281Z ================================================== 2021-05-17T18:11:07.5241063Z downloaded 6108 bytes 2021-05-17T18:11:07.5241610Z 2021-05-17T18:11:07.5271256Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pillar_1.6.1.tar.gz' 2021-05-17T18:11:07.7944671Z Content type 'binary/octet-stream' length 1114809 bytes (1.1 MB) 2021-05-17T18:11:07.8224307Z ================================================== 2021-05-17T18:11:07.8224873Z downloaded 1.1 MB 2021-05-17T18:11:07.8225161Z 2021-05-17T18:11:07.8262201Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tibble_3.1.2.tar.gz' 2021-05-17T18:11:08.0979486Z Content type 'binary/octet-stream' length 689638 bytes (673 KB) 2021-05-17T18:11:08.1225046Z ================================================== 2021-05-17T18:11:08.1225561Z downloaded 673 KB 2021-05-17T18:11:08.1225846Z 2021-05-17T18:11:08.1261325Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rematch2_2.1.2.tar.gz' 2021-05-17T18:11:08.2956599Z Content type 'binary/octet-stream' length 13441 bytes (13 KB) 2021-05-17T18:11:08.2957332Z ================================================== 2021-05-17T18:11:08.2957761Z downloaded 13 KB 2021-05-17T18:11:08.2958034Z 2021-05-17T18:11:08.2992643Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/fansi_0.4.2.tar.gz' 2021-05-17T18:11:08.4634942Z Content type 'binary/octet-stream' length 270970 bytes (264 KB) 2021-05-17T18:11:08.4794674Z ================================================== 2021-05-17T18:11:08.4795297Z downloaded 264 KB 2021-05-17T18:11:08.4795570Z 2021-05-17T18:11:08.4830387Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/diffobj_0.3.4.tar.gz' 2021-05-17T18:11:08.6476933Z Content type 'binary/octet-stream' length 476003 bytes (464 KB) 2021-05-17T18:11:08.6682674Z ================================================== 2021-05-17T18:11:08.6683240Z downloaded 464 KB 2021-05-17T18:11:08.6683525Z 2021-05-17T18:11:08.6721809Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/waldo_0.2.5.tar.gz' 2021-05-17T18:11:08.8508408Z Content type 'binary/octet-stream' length 26261 bytes (25 KB) 2021-05-17T18:11:08.8510568Z ================================================== 2021-05-17T18:11:08.8511665Z downloaded 25 KB 2021-05-17T18:11:08.8512031Z 2021-05-17T18:11:08.8550879Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ps_1.6.0.tar.gz' 2021-05-17T18:11:09.0179361Z Content type 'binary/octet-stream' length 120042 bytes (117 KB) 2021-05-17T18:11:09.0281194Z ================================================== 2021-05-17T18:11:09.0282361Z downloaded 117 KB 2021-05-17T18:11:09.0282721Z 2021-05-17T18:11:09.0320014Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/processx_3.5.2.tar.gz' 2021-05-17T18:11:09.2038655Z Content type 'binary/octet-stream' length 141949 bytes (138 KB) 2021-05-17T18:11:09.2150221Z ================================================== 2021-05-17T18:11:09.2151265Z downloaded 138 KB 2021-05-17T18:11:09.2151899Z 2021-05-17T18:11:09.2183794Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/praise_1.0.0.tar.gz' 2021-05-17T18:11:09.4876624Z Content type 'application/x-tar' length 6100 bytes 2021-05-17T18:11:09.4877945Z ================================================== 2021-05-17T18:11:09.4878764Z downloaded 6100 bytes 2021-05-17T18:11:09.4879383Z 2021-05-17T18:11:09.4911387Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgload_1.2.1.tar.gz' 2021-05-17T18:11:09.6562694Z Content type 'binary/octet-stream' length 60723 bytes (59 KB) 2021-05-17T18:11:09.6615059Z ================================================== 2021-05-17T18:11:09.6615793Z downloaded 59 KB 2021-05-17T18:11:09.6616364Z 2021-05-17T18:11:09.6652686Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/evaluate_0.14.tar.gz' 2021-05-17T18:11:09.8383377Z Content type 'application/x-tar' length 23661 bytes (23 KB) 2021-05-17T18:11:09.8384824Z ================================================== 2021-05-17T18:11:09.8385538Z downloaded 23 KB 2021-05-17T18:11:09.8386061Z 2021-05-17T18:11:09.8416402Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/ellipsis_0.3.2.tar.gz' 2021-05-17T18:11:10.1059805Z Content type 'binary/octet-stream' length 8130 bytes 2021-05-17T18:11:10.1061848Z ================================================== 2021-05-17T18:11:10.1062326Z downloaded 8130 bytes 2021-05-17T18:11:10.1062613Z 2021-05-17T18:11:10.1096193Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/digest_0.6.27.tar.gz' 2021-05-17T18:11:10.2744457Z Content type 'binary/octet-stream' length 164442 bytes (160 KB) 2021-05-17T18:11:10.2872345Z ================================================== 2021-05-17T18:11:10.2873327Z downloaded 160 KB 2021-05-17T18:11:10.2873697Z 2021-05-17T18:11:10.2909747Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/callr_3.7.0.tar.gz' 2021-05-17T18:11:10.5603047Z Content type 'binary/octet-stream' length 74923 bytes (73 KB) 2021-05-17T18:11:10.5664250Z ================================================== 2021-05-17T18:11:10.5665073Z downloaded 73 KB 2021-05-17T18:11:10.5665592Z 2021-05-17T18:11:10.5697174Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brio_1.1.2.tar.gz' 2021-05-17T18:11:10.7331000Z Content type 'binary/octet-stream' length 12096 bytes (11 KB) 2021-05-17T18:11:10.7334459Z ================================================== 2021-05-17T18:11:10.7334924Z downloaded 11 KB 2021-05-17T18:11:10.7335225Z 2021-05-17T18:11:10.7371091Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xml2_1.3.2.tar.gz' 2021-05-17T18:11:11.6916499Z Content type 'binary/octet-stream' length 272736 bytes (266 KB) 2021-05-17T18:11:11.7066123Z ================================================== 2021-05-17T18:11:11.7067329Z downloaded 266 KB 2021-05-17T18:11:11.7067883Z 2021-05-17T18:11:11.7100144Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xfun_0.23.tar.gz' 2021-05-17T18:11:11.8745941Z Content type 'binary/octet-stream' length 111996 bytes (109 KB) 2021-05-17T18:11:11.8855195Z ================================================== 2021-05-17T18:11:11.8855740Z downloaded 109 KB 2021-05-17T18:11:11.8856023Z 2021-05-17T18:11:11.8892933Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/markdown_1.1.tar.gz' 2021-05-17T18:11:12.1761425Z Content type 'application/x-tar' length 81636 bytes (79 KB) 2021-05-17T18:11:12.1820085Z ================================================== 2021-05-17T18:11:12.1820588Z downloaded 79 KB 2021-05-17T18:11:12.1820870Z 2021-05-17T18:11:12.1858213Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/highr_0.9.tar.gz' 2021-05-17T18:11:12.3501045Z Content type 'binary/octet-stream' length 15361 bytes (15 KB) 2021-05-17T18:11:12.3502114Z ================================================== 2021-05-17T18:11:12.3502662Z downloaded 15 KB 2021-05-17T18:11:12.3503037Z 2021-05-17T18:11:12.3539200Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/stringr_1.4.0.tar.gz' 2021-05-17T18:11:12.6236470Z Content type 'application/x-tar' length 135526 bytes (132 KB) 2021-05-17T18:11:12.6346844Z ================================================== 2021-05-17T18:11:12.6347556Z downloaded 132 KB 2021-05-17T18:11:12.6347963Z 2021-05-17T18:11:12.6381015Z trying URL 'https://cloud.r-project.org/src/contrib/stringi_1.6.2.tar.gz' 2021-05-17T18:11:12.7666184Z Content type 'application/x-gzip' length 7575370 bytes (7.2 MB) 2021-05-17T18:11:12.8154410Z ================================================== 2021-05-17T18:11:12.8155353Z downloaded 7.2 MB 2021-05-17T18:11:12.8155767Z 2021-05-17T18:11:12.8183166Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/Rcpp_1.0.6.tar.gz' 2021-05-17T18:11:13.0031423Z Content type 'binary/octet-stream' length 2954251 bytes (2.8 MB) 2021-05-17T18:11:13.0690602Z ================================================== 2021-05-17T18:11:13.0691112Z downloaded 2.8 MB 2021-05-17T18:11:13.0691429Z 2021-05-17T18:11:13.0727586Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/knitr_1.33.tar.gz' 2021-05-17T18:11:13.2354587Z Content type 'binary/octet-stream' length 890176 bytes (869 KB) 2021-05-17T18:11:13.2614653Z ================================================== 2021-05-17T18:11:13.2615164Z downloaded 869 KB 2021-05-17T18:11:13.2615491Z 2021-05-17T18:11:13.2651978Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/commonmark_1.7.tar.gz' 2021-05-17T18:11:13.8005744Z Content type 'application/x-tar' length 134376 bytes (131 KB) 2021-05-17T18:11:13.8066853Z ================================================== 2021-05-17T18:11:13.8067427Z downloaded 131 KB 2021-05-17T18:11:13.8067719Z 2021-05-17T18:11:13.8104990Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/brew_1.0-6.tar.gz' 2021-05-17T18:11:14.3166088Z Content type 'application/x-tar' length 83765 bytes (81 KB) 2021-05-17T18:11:14.3167412Z ================================================== 2021-05-17T18:11:14.3168028Z downloaded 81 KB 2021-05-17T18:11:14.3168879Z 2021-05-17T18:11:14.3203624Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/xopen_1.0.0.tar.gz' 2021-05-17T18:11:14.5468673Z Content type 'application/x-tar' length 11313 bytes (11 KB) 2021-05-17T18:11:14.5470004Z ================================================== 2021-05-17T18:11:14.5470725Z downloaded 11 KB 2021-05-17T18:11:14.5471256Z 2021-05-17T18:11:14.5581726Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/sessioninfo_1.1.1.tar.gz' 2021-05-17T18:11:15.4950163Z Content type 'application/x-tar' length 45020 bytes (43 KB) 2021-05-17T18:11:15.5018519Z ================================================== 2021-05-17T18:11:15.5019679Z downloaded 43 KB 2021-05-17T18:11:15.5020290Z 2021-05-17T18:11:15.5055356Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/prettyunits_1.1.1.tar.gz' 2021-05-17T18:11:16.4404660Z Content type 'binary/octet-stream' length 10377 bytes (10 KB) 2021-05-17T18:11:16.4405425Z ================================================== 2021-05-17T18:11:16.4405916Z downloaded 10 KB 2021-05-17T18:11:16.4406224Z 2021-05-17T18:11:16.4441500Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/pkgbuild_1.2.0.tar.gz' 2021-05-17T18:11:16.9497131Z Content type 'binary/octet-stream' length 30622 bytes (29 KB) 2021-05-17T18:11:16.9499410Z ================================================== 2021-05-17T18:11:16.9499971Z downloaded 29 KB 2021-05-17T18:11:16.9500295Z 2021-05-17T18:11:16.9534305Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/testthat_3.0.2.tar.gz' 2021-05-17T18:11:17.2221738Z Content type 'binary/octet-stream' length 678280 bytes (662 KB) 2021-05-17T18:11:17.2452314Z ================================================== 2021-05-17T18:11:17.2452858Z downloaded 662 KB 2021-05-17T18:11:17.2453156Z 2021-05-17T18:11:17.2489843Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rversions_2.0.2.tar.gz' 2021-05-17T18:11:17.9046963Z Content type 'binary/octet-stream' length 40913 bytes (39 KB) 2021-05-17T18:11:17.9051200Z ================================================== 2021-05-17T18:11:17.9051724Z downloaded 39 KB 2021-05-17T18:11:17.9052071Z 2021-05-17T18:11:17.9089973Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/roxygen2_7.1.1.tar.gz' 2021-05-17T18:11:18.3015169Z Content type 'binary/octet-stream' length 255098 bytes (249 KB) 2021-05-17T18:11:18.3177240Z ================================================== 2021-05-17T18:11:18.3177793Z downloaded 249 KB 2021-05-17T18:11:18.3178066Z 2021-05-17T18:11:18.3214520Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rcmdcheck_1.3.3.tar.gz' 2021-05-17T18:11:18.8268521Z Content type 'application/x-tar' length 44991 bytes (43 KB) 2021-05-17T18:11:18.8270131Z ================================================== 2021-05-17T18:11:18.8270817Z downloaded 43 KB 2021-05-17T18:11:18.8271287Z 2021-05-17T18:11:18.8304830Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/devtools_2.4.1.tar.gz' 2021-05-17T18:11:19.1525635Z Content type 'binary/octet-stream' length 370450 bytes (361 KB) 2021-05-17T18:11:19.1731236Z ================================================== 2021-05-17T18:11:19.1731790Z downloaded 361 KB 2021-05-17T18:11:19.1732064Z 2021-05-17T18:11:19.4898308Z * installing *source* package ‘utf8’ ... 2021-05-17T18:11:19.4959995Z ** package ‘utf8’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:19.4961336Z ** using staged installation 2021-05-17T18:11:19.5092936Z ** libs 2021-05-17T18:11:19.5148607Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c as_utf8.c -o as_utf8.o 2021-05-17T18:11:19.5803168Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c bytes.c -o bytes.o 2021-05-17T18:11:19.7197935Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c context.c -o context.o 2021-05-17T18:11:19.7808467Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:11:19.8210455Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render.c -o render.o 2021-05-17T18:11:19.8827039Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c render_table.c -o render_table.o 2021-05-17T18:11:20.0392497Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c string.c -o string.o 2021-05-17T18:11:20.0998784Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c text.c -o text.o 2021-05-17T18:11:20.2269628Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_encode.c -o utf8_encode.o 2021-05-17T18:11:20.3053066Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_format.c -o utf8_format.o 2021-05-17T18:11:20.3917201Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_normalize.c -o utf8_normalize.o 2021-05-17T18:11:20.4581343Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_valid.c -o utf8_valid.o 2021-05-17T18:11:20.5155655Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8_width.c -o utf8_width.o 2021-05-17T18:11:20.5764747Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c util.c -o util.o 2021-05-17T18:11:20.6304606Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/array.c -o utf8lite/src/array.o 2021-05-17T18:11:20.6842202Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/char.c -o utf8lite/src/char.o 2021-05-17T18:11:20.7524283Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/encode.c -o utf8lite/src/encode.o 2021-05-17T18:11:20.8101475Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/error.c -o utf8lite/src/error.o 2021-05-17T18:11:20.8501547Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/escape.c -o utf8lite/src/escape.o 2021-05-17T18:11:20.9134982Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graph.c -o utf8lite/src/graph.o 2021-05-17T18:11:20.9583978Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o 2021-05-17T18:11:21.1561528Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o 2021-05-17T18:11:21.4450002Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/render.c -o utf8lite/src/render.o 2021-05-17T18:11:21.6117676Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/text.c -o utf8lite/src/text.o 2021-05-17T18:11:21.6795521Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o 2021-05-17T18:11:21.7398245Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o 2021-05-17T18:11:21.8093934Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o 2021-05-17T18:11:21.8805974Z ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o 2021-05-17T18:11:21.8879356Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:11:21.9220804Z installing to /home/runner/work/_temp/Library/00LOCK-utf8/00new/utf8/libs 2021-05-17T18:11:21.9222137Z ** R 2021-05-17T18:11:21.9290757Z ** inst 2021-05-17T18:11:21.9299652Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:22.3819643Z ** help 2021-05-17T18:11:22.4069438Z *** installing help indices 2021-05-17T18:11:22.4303804Z ** building package indices 2021-05-17T18:11:22.6222729Z ** installing vignettes 2021-05-17T18:11:22.6273670Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:22.8025825Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:11:22.8209269Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:22.9964035Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:22.9971812Z * DONE (utf8) 2021-05-17T18:11:23.2075200Z * installing *source* package ‘pkgconfig’ ... 2021-05-17T18:11:23.2083795Z ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:23.2084906Z ** using staged installation 2021-05-17T18:11:23.2195421Z ** R 2021-05-17T18:11:23.2220430Z ** inst 2021-05-17T18:11:23.2228118Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:23.4499593Z ** help 2021-05-17T18:11:23.4699216Z *** installing help indices 2021-05-17T18:11:23.4862768Z ** building package indices 2021-05-17T18:11:23.6708578Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:23.8443014Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:24.0133547Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:24.0139118Z * DONE (pkgconfig) 2021-05-17T18:11:24.2821032Z * installing *source* package ‘fansi’ ... 2021-05-17T18:11:24.2855128Z ** package ‘fansi’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:24.2856534Z ** using staged installation 2021-05-17T18:11:24.2981861Z ** libs 2021-05-17T18:11:24.3063841Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c assumptions.c -o assumptions.o 2021-05-17T18:11:24.3454734Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c has.c -o has.o 2021-05-17T18:11:24.4044808Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:11:24.4496214Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c nchar.c -o nchar.o 2021-05-17T18:11:24.5189899Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read.c -o read.o 2021-05-17T18:11:24.9515771Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rnchar.c -o rnchar.o 2021-05-17T18:11:24.9881315Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c state.c -o state.o 2021-05-17T18:11:25.3331128Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strip.c -o strip.o 2021-05-17T18:11:25.4658706Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c strsplit.c -o strsplit.o 2021-05-17T18:11:25.5110090Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tabs.c -o tabs.o 2021-05-17T18:11:25.6303860Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c tohtml.c -o tohtml.o 2021-05-17T18:11:25.8639177Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unhandled.c -o unhandled.o 2021-05-17T18:11:25.9643358Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unique.c -o unique.o 2021-05-17T18:11:26.0177855Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-17T18:11:26.0760429Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T18:11:26.2336849Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c wrap.c -o wrap.o 2021-05-17T18:11:26.5322766Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o fansi.so assumptions.o has.o init.o nchar.o read.o rnchar.o state.o strip.o strsplit.o tabs.o tohtml.o unhandled.o unique.o utf8.o utils.o wrap.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:11:26.5603248Z installing to /home/runner/work/_temp/Library/00LOCK-fansi/00new/fansi/libs 2021-05-17T18:11:26.5618834Z ** R 2021-05-17T18:11:26.5713807Z ** inst 2021-05-17T18:11:26.5723834Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:27.1581281Z ** help 2021-05-17T18:11:27.2212149Z *** installing help indices 2021-05-17T18:11:27.2588585Z ** building package indices 2021-05-17T18:11:27.4779731Z ** installing vignettes 2021-05-17T18:11:27.4800589Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:27.6531938Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:11:27.6702435Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:27.8462487Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:27.8471998Z * DONE (fansi) 2021-05-17T18:11:28.2774912Z * installing *source* package ‘diffobj’ ... 2021-05-17T18:11:28.2874273Z ** package ‘diffobj’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:28.2875665Z ** using staged installation 2021-05-17T18:11:28.3022990Z ** libs 2021-05-17T18:11:28.3072345Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff.c -o diff.o 2021-05-17T18:11:28.5029583Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffobj.c -o diffobj.o 2021-05-17T18:11:28.5619248Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:11:28.6071423Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o diffobj.so diff.o diffobj.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:11:28.6300843Z installing to /home/runner/work/_temp/Library/00LOCK-diffobj/00new/diffobj/libs 2021-05-17T18:11:28.6315400Z ** R 2021-05-17T18:11:28.6707030Z ** inst 2021-05-17T18:11:28.6723072Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:34.9179924Z ** help 2021-05-17T18:11:35.1171913Z *** installing help indices 2021-05-17T18:11:35.2653025Z ** building package indices 2021-05-17T18:11:35.5419677Z ** installing vignettes 2021-05-17T18:11:35.5473229Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:35.8416006Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:11:35.8592876Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:36.2688864Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:36.2764930Z * DONE (diffobj) 2021-05-17T18:11:36.5647847Z * installing *source* package ‘ps’ ... 2021-05-17T18:11:36.5686065Z ** package ‘ps’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:36.5687356Z ** using staged installation 2021-05-17T18:11:36.7635520Z ** libs 2021-05-17T18:11:36.7687348Z gcc -g -O2 -Wall px.c -o px 2021-05-17T18:11:36.8928798Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:11:36.9577994Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-common.c -o api-common.o 2021-05-17T18:11:37.0220268Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c common.c -o common.o 2021-05-17T18:11:37.0842175Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c extra.c -o extra.o 2021-05-17T18:11:37.2372441Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dummy.c -o dummy.o 2021-05-17T18:11:37.2866565Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error-codes.c -o error-codes.o 2021-05-17T18:11:37.5524880Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c posix.c -o posix.o 2021-05-17T18:11:37.7176556Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-posix.c -o api-posix.o 2021-05-17T18:11:37.8249269Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c linux.c -o linux.o 2021-05-17T18:11:37.9595735Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api-linux.c -o api-linux.o 2021-05-17T18:11:38.3825966Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o posix.o api-posix.o linux.o api-linux.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:11:38.4099625Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-ps/00new/ps 2021-05-17T18:11:38.4136829Z ** R 2021-05-17T18:11:38.4240545Z ** inst 2021-05-17T18:11:38.4250156Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:39.4399809Z ** help 2021-05-17T18:11:39.5766713Z *** installing help indices 2021-05-17T18:11:39.6672717Z ** building package indices 2021-05-17T18:11:39.9365560Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:40.1152060Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:11:40.1328055Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:40.3213673Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:40.3225750Z * DONE (ps) 2021-05-17T18:11:40.5413817Z * installing *source* package ‘praise’ ... 2021-05-17T18:11:40.5423559Z ** package ‘praise’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:40.5425687Z ** using staged installation 2021-05-17T18:11:40.5528983Z ** R 2021-05-17T18:11:40.5566546Z ** inst 2021-05-17T18:11:40.5575973Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:40.7740447Z ** help 2021-05-17T18:11:40.7857622Z *** installing help indices 2021-05-17T18:11:40.8069209Z ** building package indices 2021-05-17T18:11:40.9895289Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:41.1583812Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:41.3253524Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:41.3258880Z * DONE (praise) 2021-05-17T18:11:41.6436412Z * installing *source* package ‘pkgload’ ... 2021-05-17T18:11:41.6482233Z ** package ‘pkgload’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:41.6483478Z ** using staged installation 2021-05-17T18:11:41.6620392Z ** R 2021-05-17T18:11:41.6718418Z ** inst 2021-05-17T18:11:41.6725087Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:43.0749830Z ** help 2021-05-17T18:11:43.0755176Z *** installing help indices 2021-05-17T18:11:43.0756042Z ** building package indices 2021-05-17T18:11:43.0757107Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:43.2825943Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:43.7455644Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:43.7468677Z * DONE (pkgload) 2021-05-17T18:11:43.9837423Z * installing *source* package ‘evaluate’ ... 2021-05-17T18:11:43.9858792Z ** package ‘evaluate’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:43.9862183Z ** using staged installation 2021-05-17T18:11:44.0000633Z ** R 2021-05-17T18:11:44.0053026Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:44.4859557Z ** help 2021-05-17T18:11:44.5116431Z *** installing help indices 2021-05-17T18:11:44.5435046Z ** building package indices 2021-05-17T18:11:44.7434854Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:44.9188014Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:45.0937765Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:45.0945940Z * DONE (evaluate) 2021-05-17T18:11:45.3021216Z * installing *source* package ‘ellipsis’ ... 2021-05-17T18:11:45.3030899Z ** package ‘ellipsis’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:45.3032042Z ** using staged installation 2021-05-17T18:11:45.3170004Z ** libs 2021-05-17T18:11:45.3219612Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dots.c -o dots.o 2021-05-17T18:11:45.3931362Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:11:45.4379640Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o ellipsis.so dots.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:11:45.4588128Z installing to /home/runner/work/_temp/Library/00LOCK-ellipsis/00new/ellipsis/libs 2021-05-17T18:11:45.4603306Z ** R 2021-05-17T18:11:45.4635568Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:45.7219752Z ** help 2021-05-17T18:11:45.7451033Z *** installing help indices 2021-05-17T18:11:45.7642450Z ** building package indices 2021-05-17T18:11:45.9544958Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:46.1446846Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:11:46.1620402Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:46.3523989Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:46.3529683Z * DONE (ellipsis) 2021-05-17T18:11:46.6361350Z * installing *source* package ‘digest’ ... 2021-05-17T18:11:46.6391421Z ** package ‘digest’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:46.6392389Z ** using staged installation 2021-05-17T18:11:46.6500835Z ** libs 2021-05-17T18:11:46.6556132Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c SpookyV2.cpp -o SpookyV2.o 2021-05-17T18:11:46.8229149Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o 2021-05-17T18:11:47.1224385Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3.c -o blake3.o 2021-05-17T18:11:47.8725097Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_dispatch.c -o blake3_dispatch.o 2021-05-17T18:11:48.0969519Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c blake3_portable.c -o blake3_portable.o 2021-05-17T18:11:48.6232181Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o 2021-05-17T18:11:48.6973229Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o 2021-05-17T18:11:48.9035678Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest2int.c -o digest2int.o 2021-05-17T18:11:48.9591120Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:11:48.9818144Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o 2021-05-17T18:11:49.1194604Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o 2021-05-17T18:11:49.1704176Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o 2021-05-17T18:11:49.2405258Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o 2021-05-17T18:11:49.5261868Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o 2021-05-17T18:11:49.6372923Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o 2021-05-17T18:11:50.1899613Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c spooky_serialize.cpp -o spooky_serialize.o 2021-05-17T18:11:50.3029076Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o 2021-05-17T18:11:50.5418918Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:11:50.5828414Z installing to /home/runner/work/_temp/Library/00LOCK-digest/00new/digest/libs 2021-05-17T18:11:50.5849141Z ** R 2021-05-17T18:11:50.5905767Z ** demo 2021-05-17T18:11:50.5911595Z ** inst 2021-05-17T18:11:50.5928998Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:51.1071810Z ** help 2021-05-17T18:11:51.1447952Z *** installing help indices 2021-05-17T18:11:51.1710996Z ** building package indices 2021-05-17T18:11:51.3699613Z ** installing vignettes 2021-05-17T18:11:51.3740338Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:51.5542249Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:11:51.5728559Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:51.7521721Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:51.7532233Z * DONE (digest) 2021-05-17T18:11:51.9706355Z * installing *source* package ‘brio’ ... 2021-05-17T18:11:51.9724039Z ** package ‘brio’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:51.9727103Z ** using staged installation 2021-05-17T18:11:51.9910961Z ** libs 2021-05-17T18:11:51.9963097Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c brio.c -o brio.o 2021-05-17T18:11:52.0336454Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c file_line_endings.c -o file_line_endings.o 2021-05-17T18:11:52.0815090Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:11:52.1247965Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file.c -o read_file.o 2021-05-17T18:11:52.1767863Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_file_raw.c -o read_file_raw.o 2021-05-17T18:11:52.2291450Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c read_lines.c -o read_lines.o 2021-05-17T18:11:52.3095663Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_file.c -o write_file.o 2021-05-17T18:11:52.3561272Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write_lines.c -o write_lines.o 2021-05-17T18:11:52.4120610Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_lines.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:11:52.4363047Z installing to /home/runner/work/_temp/Library/00LOCK-brio/00new/brio/libs 2021-05-17T18:11:52.4379103Z ** R 2021-05-17T18:11:52.4409003Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:11:52.6696945Z ** help 2021-05-17T18:11:52.6892229Z *** installing help indices 2021-05-17T18:11:52.7085979Z ** building package indices 2021-05-17T18:11:52.9030200Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:11:53.0799750Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:11:53.0973892Z ** testing if installed package can be loaded from final location 2021-05-17T18:11:53.2694452Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:11:53.2710938Z * DONE (brio) 2021-05-17T18:11:53.5559078Z * installing *source* package ‘xml2’ ... 2021-05-17T18:11:53.5601055Z ** package ‘xml2’ successfully unpacked and MD5 sums checked 2021-05-17T18:11:53.5604245Z ** using staged installation 2021-05-17T18:11:53.5748024Z Found pkg-config cflags and libs! 2021-05-17T18:11:53.6575237Z Using PKG_CFLAGS=-I/usr/include/libxml2 2021-05-17T18:11:53.6576788Z Using PKG_LIBS=-lxml2 2021-05-17T18:11:53.8239832Z ** libs 2021-05-17T18:11:53.8292632Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c connection.cpp -o connection.o 2021-05-17T18:11:54.3040242Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:11:54.3490509Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_doc.cpp -o xml2_doc.o 2021-05-17T18:11:54.8731770Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_init.cpp -o xml2_init.o 2021-05-17T18:11:55.2803317Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_namespace.cpp -o xml2_namespace.o 2021-05-17T18:11:55.9548636Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_node.cpp -o xml2_node.o 2021-05-17T18:11:57.7469759Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_output.cpp -o xml2_output.o 2021-05-17T18:11:58.2572272Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_schema.cpp -o xml2_schema.o 2021-05-17T18:11:58.8155810Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_url.cpp -o xml2_url.o 2021-05-17T18:11:59.2602092Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c xml2_xpath.cpp -o xml2_xpath.o 2021-05-17T18:11:59.6781646Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:11:59.7661452Z installing to /home/runner/work/_temp/Library/00LOCK-xml2/00new/xml2/libs 2021-05-17T18:11:59.7663618Z ** R 2021-05-17T18:11:59.7770933Z ** inst 2021-05-17T18:11:59.7783483Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:12:00.6790860Z ** help 2021-05-17T18:12:00.7708264Z *** installing help indices 2021-05-17T18:12:00.8205816Z ** building package indices 2021-05-17T18:12:01.0499702Z ** installing vignettes 2021-05-17T18:12:01.0653370Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:12:01.2969863Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:12:01.3187068Z ** testing if installed package can be loaded from final location 2021-05-17T18:12:01.5206824Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:12:01.5220015Z * DONE (xml2) 2021-05-17T18:12:01.7957773Z * installing *source* package ‘xfun’ ... 2021-05-17T18:12:01.7990133Z ** package ‘xfun’ successfully unpacked and MD5 sums checked 2021-05-17T18:12:01.7991318Z ** using staged installation 2021-05-17T18:12:01.8141267Z ** libs 2021-05-17T18:12:01.8225810Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T18:12:01.9196321Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:12:01.9652971Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o xfun.so base64.o init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:12:01.9991458Z installing to /home/runner/work/_temp/Library/00LOCK-xfun/00new/xfun/libs 2021-05-17T18:12:02.0004096Z ** R 2021-05-17T18:12:02.0145735Z ** inst 2021-05-17T18:12:02.0158093Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:12:03.3436818Z ** help 2021-05-17T18:12:03.4858038Z *** installing help indices 2021-05-17T18:12:03.5880608Z ** building package indices 2021-05-17T18:12:03.8651881Z ** installing vignettes 2021-05-17T18:12:03.8715840Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:12:04.0522791Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:12:04.0699240Z ** testing if installed package can be loaded from final location 2021-05-17T18:12:04.2705307Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:12:04.2719721Z * DONE (xfun) 2021-05-17T18:12:06.7730768Z * installing *source* package ‘stringi’ ... 2021-05-17T18:12:06.8843068Z ** package ‘stringi’ successfully unpacked and MD5 sums checked 2021-05-17T18:12:06.8844716Z ** using staged installation 2021-05-17T18:12:07.0022479Z checking for R_HOME... /opt/R/devel/lib/R 2021-05-17T18:12:07.0023736Z checking for R... /opt/R/devel/lib/R/bin/R 2021-05-17T18:12:07.1597070Z checking for endianness... little 2021-05-17T18:12:07.3187479Z checking for R >= 3.1.0 for C++11 use... yes 2021-05-17T18:12:07.4745600Z checking for R < 3.4.0 for CXX1X flag use... no 2021-05-17T18:12:07.4750139Z checking for cat... /usr/bin/cat 2021-05-17T18:12:07.6922683Z checking for local ICUDT_DIR... icu69/data 2021-05-17T18:12:07.6923665Z checking for gcc... gcc 2021-05-17T18:12:07.7510153Z checking whether the C compiler works... yes 2021-05-17T18:12:07.7511727Z checking for C compiler default output file name... a.out 2021-05-17T18:12:07.7888031Z checking for suffix of executables... 2021-05-17T18:12:07.8346237Z checking whether we are cross compiling... no 2021-05-17T18:12:07.8583006Z checking for suffix of object files... o 2021-05-17T18:12:07.8795739Z checking whether we are using the GNU C compiler... yes 2021-05-17T18:12:07.9007753Z checking whether gcc accepts -g... yes 2021-05-17T18:12:07.9356973Z checking for gcc option to accept ISO C89... none needed 2021-05-17T18:12:07.9569434Z checking how to run the C preprocessor... gcc -E 2021-05-17T18:12:07.9792823Z checking for grep that handles long lines and -e... /usr/bin/grep 2021-05-17T18:12:07.9808667Z checking for egrep... /usr/bin/grep -E 2021-05-17T18:12:08.0859043Z checking for ANSI C header files... yes 2021-05-17T18:12:08.1142128Z checking for sys/types.h... yes 2021-05-17T18:12:08.1464013Z checking for sys/stat.h... yes 2021-05-17T18:12:08.1799368Z checking for stdlib.h... yes 2021-05-17T18:12:08.2143999Z checking for string.h... yes 2021-05-17T18:12:08.2483847Z checking for memory.h... yes 2021-05-17T18:12:08.2831157Z checking for strings.h... yes 2021-05-17T18:12:08.3200097Z checking for inttypes.h... yes 2021-05-17T18:12:08.3551618Z checking for stdint.h... yes 2021-05-17T18:12:08.3940120Z checking for unistd.h... yes 2021-05-17T18:12:08.4460906Z checking elf.h usability... yes 2021-05-17T18:12:08.4568413Z checking elf.h presence... yes 2021-05-17T18:12:08.4569440Z checking for elf.h... yes 2021-05-17T18:12:08.5378331Z checking whether we are using the GNU C++ compiler... yes 2021-05-17T18:12:08.5602304Z checking whether g++ -std=gnu++11 accepts -g... yes 2021-05-17T18:12:08.8678732Z checking whether the C++ compiler supports the long long type... yes 2021-05-17T18:12:08.8938308Z checking whether the compiler implements namespaces... yes 2021-05-17T18:12:09.0226135Z checking whether the compiler supports Standard Template Library... yes 2021-05-17T18:12:09.5322843Z checking whether std::map is available... yes 2021-05-17T18:12:09.5345965Z checking for pkg-config... /usr/bin/pkg-config 2021-05-17T18:12:09.5482925Z checking with pkg-config for the system ICU4C... 66.1 2021-05-17T18:12:09.5506656Z checking for ICU4C >= 55... yes 2021-05-17T18:12:09.5572392Z checking for additional required CPPFLAGS, LDFLAGS, and LIBS... done 2021-05-17T18:12:09.8784527Z checking whether an ICU4C-based project can be built... yes 2021-05-17T18:12:09.9371331Z checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes 2021-05-17T18:12:10.2074311Z checking programmatically if U_CHARSET_IS_UTF8 is defined and set... yes 2021-05-17T18:12:10.9794053Z checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes 2021-05-17T18:12:11.5710569Z checking the capabilities of the ICU data library (ucol)... yes 2021-05-17T18:12:11.6084740Z configure: creating ./config.status 2021-05-17T18:12:11.6866362Z config.status: creating src/Makevars 2021-05-17T18:12:11.7048872Z config.status: creating src/uconfig_local.h 2021-05-17T18:12:11.7220042Z config.status: creating src/install.libs.R 2021-05-17T18:12:11.7385613Z 2021-05-17T18:12:11.7387792Z *** stringi configure summary: 2021-05-17T18:12:11.7388493Z ICU_FOUND=1 2021-05-17T18:12:11.7389162Z STRINGI_CXXSTD=CXX_STD=CXX11 2021-05-17T18:12:11.7390383Z STRINGI_CFLAGS= -fpic 2021-05-17T18:12:11.7391394Z STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H 2021-05-17T18:12:11.7392339Z STRINGI_CXXFLAGS= -fpic 2021-05-17T18:12:11.7393297Z STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu 2021-05-17T18:12:11.7394289Z STRINGI_LIBS=-licui18n -licuuc -licudata 2021-05-17T18:12:11.7394842Z 2021-05-17T18:12:11.7395438Z *** Compiler settings used: 2021-05-17T18:12:11.7396016Z CC=gcc 2021-05-17T18:12:11.7396717Z LD=g++ -std=gnu++14 2021-05-17T18:12:11.7397471Z CFLAGS=-g -O2 -fpic 2021-05-17T18:12:11.7398391Z CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG 2021-05-17T18:12:11.7399250Z CXX=g++ -std=gnu++11 2021-05-17T18:12:11.7400006Z CXXFLAGS=-g -O2 -fpic 2021-05-17T18:12:11.7400613Z LDFLAGS= 2021-05-17T18:12:11.7401146Z LIBS= 2021-05-17T18:12:11.7401558Z 2021-05-17T18:12:11.7754901Z ** libs 2021-05-17T18:12:11.7843009Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_brkiter.cpp -o stri_brkiter.o 2021-05-17T18:12:12.4322878Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_collator.cpp -o stri_collator.o 2021-05-17T18:12:13.0475477Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_common.cpp -o stri_common.o 2021-05-17T18:12:13.6955119Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_compare.cpp -o stri_compare.o 2021-05-17T18:12:14.4129044Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_base.cpp -o stri_container_base.o 2021-05-17T18:12:14.9171790Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o 2021-05-17T18:12:15.7381160Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listint.cpp -o stri_container_listint.o 2021-05-17T18:12:16.2787153Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listraw.cpp -o stri_container_listraw.o 2021-05-17T18:12:16.8606635Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listutf8.cpp -o stri_container_listutf8.o 2021-05-17T18:12:17.4060654Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_regex.cpp -o stri_container_regex.o 2021-05-17T18:12:18.0387459Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_usearch.cpp -o stri_container_usearch.o 2021-05-17T18:12:18.6691213Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf16.cpp -o stri_container_utf16.o 2021-05-17T18:12:19.3830244Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8.cpp -o stri_container_utf8.o 2021-05-17T18:12:20.0502746Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o 2021-05-17T18:12:20.6529214Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o 2021-05-17T18:12:21.5982074Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_detection.cpp -o stri_encoding_detection.o 2021-05-17T18:12:23.1614872Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_management.cpp -o stri_encoding_management.o 2021-05-17T18:12:23.8319992Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_escape.cpp -o stri_escape.o 2021-05-17T18:12:24.4835789Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_exception.cpp -o stri_exception.o 2021-05-17T18:12:25.0026088Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ICU_settings.cpp -o stri_ICU_settings.o 2021-05-17T18:12:25.5161871Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_join.cpp -o stri_join.o 2021-05-17T18:12:26.4303738Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_length.cpp -o stri_length.o 2021-05-17T18:12:27.0946787Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_pad.cpp -o stri_pad.o 2021-05-17T18:12:27.7095658Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_prepare_arg.cpp -o stri_prepare_arg.o 2021-05-17T18:12:28.4804236Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_random.cpp -o stri_random.o 2021-05-17T18:12:29.2429383Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_reverse.cpp -o stri_reverse.o 2021-05-17T18:12:29.8049483Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_count.cpp -o stri_search_class_count.o 2021-05-17T18:12:30.4294895Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_detect.cpp -o stri_search_class_detect.o 2021-05-17T18:12:31.0580057Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_extract.cpp -o stri_search_class_extract.o 2021-05-17T18:12:31.9013212Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_locate.cpp -o stri_search_class_locate.o 2021-05-17T18:12:32.7318896Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_replace.cpp -o stri_search_class_replace.o 2021-05-17T18:12:33.7095092Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_split.cpp -o stri_search_class_split.o 2021-05-17T18:12:34.5186258Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o 2021-05-17T18:12:35.2275026Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_subset.cpp -o stri_search_class_subset.o 2021-05-17T18:12:35.9663111Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_trim.cpp -o stri_search_class_trim.o 2021-05-17T18:12:36.5962925Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_common.cpp -o stri_search_common.o 2021-05-17T18:12:37.2173746Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_count.cpp -o stri_search_coll_count.o 2021-05-17T18:12:37.8380754Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o 2021-05-17T18:12:38.4821130Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o 2021-05-17T18:12:39.2634826Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o 2021-05-17T18:12:40.0366725Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o 2021-05-17T18:12:40.8677058Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_split.cpp -o stri_search_coll_split.o 2021-05-17T18:12:41.6717762Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o 2021-05-17T18:12:42.3741839Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o 2021-05-17T18:12:43.0874533Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o 2021-05-17T18:12:43.6185006Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o 2021-05-17T18:12:44.3038734Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o 2021-05-17T18:12:44.9781945Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o 2021-05-17T18:12:45.6513787Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o 2021-05-17T18:12:46.2048026Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o 2021-05-17T18:12:46.7484905Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o 2021-05-17T18:12:47.4636895Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o 2021-05-17T18:12:48.1792526Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o 2021-05-17T18:12:48.9723083Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o 2021-05-17T18:12:49.7158350Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o 2021-05-17T18:12:50.4277455Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o 2021-05-17T18:12:51.0641986Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_in.cpp -o stri_search_in.o 2021-05-17T18:12:51.0791323Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_other_split.cpp -o stri_search_other_split.o 2021-05-17T18:12:51.8799360Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_count.cpp -o stri_search_regex_count.o 2021-05-17T18:12:52.4317557Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o 2021-05-17T18:12:52.9805072Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o 2021-05-17T18:12:53.7281163Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o 2021-05-17T18:12:54.4575732Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_match.cpp -o stri_search_regex_match.o 2021-05-17T18:12:55.5955589Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o 2021-05-17T18:12:56.0024661Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_split.cpp -o stri_search_regex_split.o 2021-05-17T18:12:56.7701642Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o 2021-05-17T18:12:57.4192910Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sort.cpp -o stri_sort.o 2021-05-17T18:12:58.9516858Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stats.cpp -o stri_stats.o 2021-05-17T18:12:59.5647148Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stringi.cpp -o stri_stringi.o 2021-05-17T18:13:00.1177174Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sub.cpp -o stri_sub.o 2021-05-17T18:13:00.9149851Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_test.cpp -o stri_test.o 2021-05-17T18:13:01.4376966Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_zone.cpp -o stri_time_zone.o 2021-05-17T18:13:01.9974373Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_calendar.cpp -o stri_time_calendar.o 2021-05-17T18:13:02.7272251Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_symbols.cpp -o stri_time_symbols.o 2021-05-17T18:13:03.4198514Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_format.cpp -o stri_time_format.o 2021-05-17T18:13:04.2154959Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_casemap.cpp -o stri_trans_casemap.o 2021-05-17T18:13:04.8686255Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_other.cpp -o stri_trans_other.o 2021-05-17T18:13:05.5664797Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_normalization.cpp -o stri_trans_normalization.o 2021-05-17T18:13:06.1679454Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o 2021-05-17T18:13:06.7348403Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ucnv.cpp -o stri_ucnv.o 2021-05-17T18:13:07.3383386Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_uloc.cpp -o stri_uloc.o 2021-05-17T18:13:07.8493293Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_utils.cpp -o stri_utils.o 2021-05-17T18:13:08.4118901Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_wrap.cpp -o stri_wrap.o 2021-05-17T18:13:09.7015784Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:13:09.9064838Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-stringi/00new/stringi 2021-05-17T18:13:09.9849691Z ** R 2021-05-17T18:13:10.0139400Z ** inst 2021-05-17T18:13:10.0146866Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:13:11.0526760Z ** help 2021-05-17T18:13:11.4836835Z *** installing help indices 2021-05-17T18:13:11.6863868Z ** building package indices 2021-05-17T18:13:12.0750327Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:13:12.2557813Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:13:12.2773816Z ** testing if installed package can be loaded from final location 2021-05-17T18:13:12.4687931Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:13:12.4701680Z * DONE (stringi) 2021-05-17T18:13:13.4097204Z * installing *source* package ‘Rcpp’ ... 2021-05-17T18:13:13.4443890Z ** package ‘Rcpp’ successfully unpacked and MD5 sums checked 2021-05-17T18:13:13.4444678Z ** using staged installation 2021-05-17T18:13:13.4550330Z ** libs 2021-05-17T18:13:13.4600336Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o 2021-05-17T18:13:16.3702535Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c attributes.cpp -o attributes.o 2021-05-17T18:13:31.4916710Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c barrier.cpp -o barrier.o 2021-05-17T18:13:31.6829160Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c date.cpp -o date.o 2021-05-17T18:13:34.9111447Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c module.cpp -o module.o 2021-05-17T18:13:41.0960445Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c rcpp_init.cpp -o rcpp_init.o 2021-05-17T18:13:43.9281152Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:13:44.1000008Z installing to /home/runner/work/_temp/Library/00LOCK-Rcpp/00new/Rcpp/libs 2021-05-17T18:13:44.1117800Z ** R 2021-05-17T18:13:44.1250953Z ** inst 2021-05-17T18:13:44.1636888Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:13:45.8394324Z ** help 2021-05-17T18:13:45.9321927Z *** installing help indices 2021-05-17T18:13:45.9941531Z ** building package indices 2021-05-17T18:13:46.2339665Z ** installing vignettes 2021-05-17T18:13:46.2410483Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:13:46.5044849Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:13:46.5278699Z ** testing if installed package can be loaded from final location 2021-05-17T18:13:46.8186243Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:13:46.8271393Z * DONE (Rcpp) 2021-05-17T18:13:47.1135680Z * installing *source* package ‘commonmark’ ... 2021-05-17T18:13:47.1173794Z ** package ‘commonmark’ successfully unpacked and MD5 sums checked 2021-05-17T18:13:47.1176262Z ** using staged installation 2021-05-17T18:13:47.1288601Z ** libs 2021-05-17T18:13:47.1338350Z rm -f cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o extensions.o init.o wrapper.o commonmark.so cmark/libstatcmark.a 2021-05-17T18:13:47.1369719Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions.c -o extensions.o 2021-05-17T18:13:47.1822249Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:13:47.2214415Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c wrapper.c -o wrapper.o 2021-05-17T18:13:47.2820954Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o 2021-05-17T18:13:47.3292653Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/node.c -o cmark/node.o 2021-05-17T18:13:47.5963082Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o 2021-05-17T18:13:47.6808882Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o 2021-05-17T18:13:48.0998792Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o 2021-05-17T18:13:48.7878525Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o 2021-05-17T18:13:50.4250536Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o 2021-05-17T18:13:53.4963102Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o 2021-05-17T18:13:53.6183022Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/references.c -o cmark/references.o 2021-05-17T18:13:53.6648543Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/render.c -o cmark/render.o 2021-05-17T18:13:53.7613219Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/man.c -o cmark/man.o 2021-05-17T18:13:53.8438777Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o 2021-05-17T18:13:53.9243554Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/html.c -o cmark/html.o 2021-05-17T18:13:54.1051971Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o 2021-05-17T18:13:54.2923388Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o 2021-05-17T18:13:54.4131430Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o 2021-05-17T18:13:54.4560727Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o 2021-05-17T18:13:54.4989905Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o 2021-05-17T18:13:54.6000363Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o 2021-05-17T18:13:54.6300707Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o 2021-05-17T18:13:54.6895367Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o 2021-05-17T18:13:54.7307873Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o 2021-05-17T18:13:54.7685774Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o 2021-05-17T18:13:54.8167706Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o 2021-05-17T18:13:54.8821891Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/plaintext.c -o cmark/plaintext.o 2021-05-17T18:13:54.9761007Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/footnotes.c -o cmark/footnotes.o 2021-05-17T18:13:55.0201561Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cmark/map.c -o cmark/map.o 2021-05-17T18:13:55.0913232Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o 2021-05-17T18:13:55.2534138Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o 2021-05-17T18:13:55.2843389Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o 2021-05-17T18:13:55.4159129Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o 2021-05-17T18:13:55.4925581Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/table.c -o extensions/table.o 2021-05-17T18:13:55.7490798Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -Icmark -I. -DCMARK_GFM_STATIC_DEFINE -DCMARK_GFM_EXTENSIONS_STATIC_DEFINE -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o 2021-05-17T18:13:55.8003460Z ar rcs cmark/libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o cmark/plaintext.o cmark/footnotes.o cmark/map.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o 2021-05-17T18:13:55.8132101Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o commonmark.so extensions.o init.o wrapper.o -Lcmark -lstatcmark -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:13:55.8581473Z installing to /home/runner/work/_temp/Library/00LOCK-commonmark/00new/commonmark/libs 2021-05-17T18:13:55.8616975Z ** R 2021-05-17T18:13:55.8643165Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:13:56.0865754Z ** help 2021-05-17T18:13:56.0987904Z *** installing help indices 2021-05-17T18:13:56.1146481Z ** building package indices 2021-05-17T18:13:56.3015402Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:13:56.4776049Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:13:56.4968760Z ** testing if installed package can be loaded from final location 2021-05-17T18:13:56.6668413Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:13:56.6674316Z * DONE (commonmark) 2021-05-17T18:13:56.9050771Z * installing *source* package ‘brew’ ... 2021-05-17T18:13:56.9052270Z ** using staged installation 2021-05-17T18:13:56.9130363Z ** R 2021-05-17T18:13:56.9156681Z ** inst 2021-05-17T18:13:56.9181070Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:13:57.2541083Z ** help 2021-05-17T18:13:57.2678254Z *** installing help indices 2021-05-17T18:13:57.2842592Z ** building package indices 2021-05-17T18:13:57.4716962Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:13:57.6431990Z ** testing if installed package can be loaded from final location 2021-05-17T18:13:57.8182230Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:13:57.8190161Z * DONE (brew) 2021-05-17T18:13:58.0399409Z * installing *source* package ‘sessioninfo’ ... 2021-05-17T18:13:58.0417488Z ** package ‘sessioninfo’ successfully unpacked and MD5 sums checked 2021-05-17T18:13:58.0421200Z ** using staged installation 2021-05-17T18:13:58.0601073Z ** R 2021-05-17T18:13:58.0642604Z ** inst 2021-05-17T18:13:58.0651197Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:13:58.4859325Z ** help 2021-05-17T18:13:58.5012878Z *** installing help indices 2021-05-17T18:13:58.5186381Z ** building package indices 2021-05-17T18:13:58.7072085Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:13:58.9309885Z ** testing if installed package can be loaded from final location 2021-05-17T18:13:59.1509043Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:13:59.1515314Z * DONE (sessioninfo) 2021-05-17T18:13:59.3562635Z * installing *source* package ‘prettyunits’ ... 2021-05-17T18:13:59.3572346Z ** package ‘prettyunits’ successfully unpacked and MD5 sums checked 2021-05-17T18:13:59.3573464Z ** using staged installation 2021-05-17T18:13:59.3680748Z ** R 2021-05-17T18:13:59.3719879Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:13:59.6753429Z ** help 2021-05-17T18:13:59.7021201Z *** installing help indices 2021-05-17T18:13:59.7221432Z ** building package indices 2021-05-17T18:13:59.9150066Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:00.0877499Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:00.2570688Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:00.2576215Z * DONE (prettyunits) 2021-05-17T18:14:00.7741107Z * installing *source* package ‘vctrs’ ... 2021-05-17T18:14:00.7884871Z ** package ‘vctrs’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:00.7886539Z ** using staged installation 2021-05-17T18:14:00.8060757Z ** libs 2021-05-17T18:14:00.8131722Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c altrep-rle.c -o altrep-rle.o 2021-05-17T18:14:00.9225249Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg-counter.c -o arg-counter.o 2021-05-17T18:14:01.0056424Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c arg.c -o arg.o 2021-05-17T18:14:01.0886690Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c bind.c -o bind.o 2021-05-17T18:14:01.3187669Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c-unchop.c -o c-unchop.o 2021-05-17T18:14:01.4292101Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c c.c -o c.o 2021-05-17T18:14:01.5610756Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c callables.c -o callables.o 2021-05-17T18:14:01.6223064Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-bare.c -o cast-bare.o 2021-05-17T18:14:01.7231668Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast-dispatch.c -o cast-dispatch.o 2021-05-17T18:14:01.7965882Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cast.c -o cast.o 2021-05-17T18:14:01.9243887Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c compare.c -o compare.o 2021-05-17T18:14:02.1166522Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c complete.c -o complete.o 2021-05-17T18:14:02.2287241Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c conditions.c -o conditions.o 2021-05-17T18:14:02.3121233Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dictionary.c -o dictionary.o 2021-05-17T18:14:02.5476229Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dim.c -o dim.o 2021-05-17T18:14:02.6067224Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c equal.c -o equal.o 2021-05-17T18:14:02.9735505Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fields.c -o fields.o 2021-05-17T18:14:03.0594397Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fill.c -o fill.o 2021-05-17T18:14:03.1771097Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c group.c -o group.o 2021-05-17T18:14:03.2914403Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c growable.c -o growable.o 2021-05-17T18:14:03.3450146Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hash.c -o hash.o 2021-05-17T18:14:03.5622171Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:14:03.6213517Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c names.c -o names.o 2021-05-17T18:14:03.9172766Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-groups.c -o order-groups.o 2021-05-17T18:14:03.9873467Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-radix.c -o order-radix.o 2021-05-17T18:14:04.6642207Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-sortedness.c -o order-sortedness.o 2021-05-17T18:14:04.8081540Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-transform.c -o order-transform.o 2021-05-17T18:14:04.8786793Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c order-truelength.c -o order-truelength.o 2021-05-17T18:14:04.9493595Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c poly-op.c -o poly-op.o 2021-05-17T18:14:05.1007774Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy-restore.c -o proxy-restore.o 2021-05-17T18:14:05.2034887Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c proxy.c -o proxy.o 2021-05-17T18:14:05.3233325Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c ptype2-dispatch.c -o ptype2-dispatch.o 2021-05-17T18:14:05.4295904Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rep.c -o rep.o 2021-05-17T18:14:05.5562819Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c runs.c -o runs.o 2021-05-17T18:14:05.7856899Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c shape.c -o shape.o 2021-05-17T18:14:05.8794693Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size-common.c -o size-common.o 2021-05-17T18:14:05.9575622Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o 2021-05-17T18:14:06.0638182Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-array.c -o slice-array.o 2021-05-17T18:14:06.4983545Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign-array.c -o slice-assign-array.o 2021-05-17T18:14:06.8314003Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-assign.c -o slice-assign.o 2021-05-17T18:14:07.0629849Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice-chop.c -o slice-chop.o 2021-05-17T18:14:07.2218928Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slice.c -o slice.o 2021-05-17T18:14:07.4909503Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c split.c -o split.o 2021-05-17T18:14:07.5448074Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript-loc.c -o subscript-loc.o 2021-05-17T18:14:07.7308639Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c subscript.c -o subscript.o 2021-05-17T18:14:07.8676593Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c translate.c -o translate.o 2021-05-17T18:14:07.9664309Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-data-frame.c -o type-data-frame.o 2021-05-17T18:14:08.2954884Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-date-time.c -o type-date-time.o 2021-05-17T18:14:08.4409545Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-factor.c -o type-factor.o 2021-05-17T18:14:08.5650349Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-info.c -o type-info.o 2021-05-17T18:14:08.6632863Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type-tibble.c -o type-tibble.o 2021-05-17T18:14:08.7327775Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type.c -o type.o 2021-05-17T18:14:08.8479323Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c type2.c -o type2.o 2021-05-17T18:14:08.9713255Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2-s3.c -o typeof2-s3.o 2021-05-17T18:14:09.0865330Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c typeof2.c -o typeof2.o 2021-05-17T18:14:09.1819955Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unspecified.c -o unspecified.o 2021-05-17T18:14:09.2520556Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-dispatch.c -o utils-dispatch.o 2021-05-17T18:14:09.3196314Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils-rlang.c -o utils-rlang.o 2021-05-17T18:14:09.3694826Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T18:14:09.9611995Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c version.c -o version.o 2021-05-17T18:14:09.9994980Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-transform.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:14:10.0580594Z installing to /home/runner/work/_temp/Library/00LOCK-vctrs/00new/vctrs/libs 2021-05-17T18:14:10.0597869Z ** R 2021-05-17T18:14:10.0930095Z ** inst 2021-05-17T18:14:10.0950647Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:12.6723825Z ** help 2021-05-17T18:14:12.9217625Z *** installing help indices 2021-05-17T18:14:13.1029393Z *** copying figures 2021-05-17T18:14:13.1038297Z ** building package indices 2021-05-17T18:14:13.4133160Z ** installing vignettes 2021-05-17T18:14:13.4311569Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:13.6568820Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:14:13.6758522Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:13.9467136Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:13.9499868Z * DONE (vctrs) 2021-05-17T18:14:14.2260368Z * installing *source* package ‘processx’ ... 2021-05-17T18:14:14.2295030Z ** package ‘processx’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:14.2296288Z ** using staged installation 2021-05-17T18:14:14.2465212Z ** libs 2021-05-17T18:14:14.2518635Z gcc -g -O2 -L/usr/local/lib -Wall tools/px.c -o tools/px 2021-05-17T18:14:14.3826091Z gcc -g -O2 -L/usr/local/lib supervisor/supervisor.c \ 2021-05-17T18:14:14.3827759Z supervisor/utils.c -o supervisor/supervisor 2021-05-17T18:14:14.5491185Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T18:14:14.6316084Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c client.c -o client.o 2021-05-17T18:14:14.7204777Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c errors.c -o errors.o 2021-05-17T18:14:14.7819940Z gcc -shared -L"/opt/R/devel/lib/R/lib" -L/usr/local/lib -o client.so base64.o client.o errors.o \ 2021-05-17T18:14:14.7821577Z -L"/opt/R/devel/lib/R/lib" -lR 2021-05-17T18:14:14.8047894Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:14:14.8803023Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c poll.c -o poll.o 2021-05-17T18:14:14.9775515Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-connection.c -o processx-connection.o 2021-05-17T18:14:15.3016707Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c processx-vector.c -o processx-vector.o 2021-05-17T18:14:15.3889035Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c create-time.c -o create-time.o 2021-05-17T18:14:15.4974315Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/childlist.c -o unix/childlist.o 2021-05-17T18:14:15.5895350Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/connection.c -o unix/connection.o 2021-05-17T18:14:15.6647880Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/processx.c -o unix/processx.o 2021-05-17T18:14:15.9716857Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/sigchld.c -o unix/sigchld.o 2021-05-17T18:14:16.0664015Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/utils.c -o unix/utils.o 2021-05-17T18:14:16.1671522Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c unix/named_pipe.c -o unix/named_pipe.o 2021-05-17T18:14:16.2215807Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cleancall.c -o cleancall.o 2021-05-17T18:14:16.2900247Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:14:16.3170890Z installing via 'install.libs.R' to /home/runner/work/_temp/Library/00LOCK-processx/00new/processx 2021-05-17T18:14:16.3210165Z ** R 2021-05-17T18:14:16.3341777Z ** inst 2021-05-17T18:14:16.3349534Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:17.8786714Z ** help 2021-05-17T18:14:17.9508752Z *** installing help indices 2021-05-17T18:14:17.9913079Z ** building package indices 2021-05-17T18:14:18.2066532Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:18.3888223Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:14:18.4139974Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:18.6181096Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:18.6197390Z * DONE (processx) 2021-05-17T18:14:18.8631341Z * installing *source* package ‘markdown’ ... 2021-05-17T18:14:18.8658042Z ** package ‘markdown’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:18.8661390Z ** using staged installation 2021-05-17T18:14:18.8806061Z ** libs 2021-05-17T18:14:18.8857061Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o 2021-05-17T18:14:18.9471246Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o 2021-05-17T18:14:18.9944473Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o 2021-05-17T18:14:19.1548384Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o 2021-05-17T18:14:19.2545805Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o 2021-05-17T18:14:19.3258277Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o 2021-05-17T18:14:19.3639101Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o 2021-05-17T18:14:19.4023753Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o 2021-05-17T18:14:19.6043884Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o 2021-05-17T18:14:19.7336931Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o 2021-05-17T18:14:20.7496483Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o 2021-05-17T18:14:20.7954437Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:14:20.8215663Z installing to /home/runner/work/_temp/Library/00LOCK-markdown/00new/markdown/libs 2021-05-17T18:14:20.8232324Z ** R 2021-05-17T18:14:20.8284653Z ** inst 2021-05-17T18:14:20.8302132Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:21.2424554Z ** help 2021-05-17T18:14:21.2781872Z *** installing help indices 2021-05-17T18:14:21.3033728Z ** building package indices 2021-05-17T18:14:21.4955443Z ** installing vignettes 2021-05-17T18:14:21.5014244Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:21.6745770Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:14:21.6919935Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:21.8637883Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:21.8647554Z * DONE (markdown) 2021-05-17T18:14:22.0711884Z * installing *source* package ‘highr’ ... 2021-05-17T18:14:22.0722243Z ** package ‘highr’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:22.0723284Z ** using staged installation 2021-05-17T18:14:22.0867725Z ** R 2021-05-17T18:14:22.0902476Z ** inst 2021-05-17T18:14:22.0912954Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:22.4114784Z ** help 2021-05-17T18:14:22.4231645Z *** installing help indices 2021-05-17T18:14:22.4383844Z ** building package indices 2021-05-17T18:14:22.6161834Z ** installing vignettes 2021-05-17T18:14:22.6211355Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:22.7888990Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:22.9557084Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:22.9564404Z * DONE (highr) 2021-05-17T18:14:23.6191182Z * installing *source* package ‘stringr’ ... 2021-05-17T18:14:23.6200327Z ** package ‘stringr’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:23.6201323Z ** using staged installation 2021-05-17T18:14:23.6201951Z ** R 2021-05-17T18:14:23.6202438Z ** data 2021-05-17T18:14:23.6203091Z *** moving datasets to lazyload DB 2021-05-17T18:14:23.6203716Z ** inst 2021-05-17T18:14:23.6204692Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:23.7539448Z ** help 2021-05-17T18:14:23.8261098Z *** installing help indices 2021-05-17T18:14:23.8779047Z *** copying figures 2021-05-17T18:14:23.8780621Z ** building package indices 2021-05-17T18:14:24.1010010Z ** installing vignettes 2021-05-17T18:14:24.1069977Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:24.2902835Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:24.4766581Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:24.4776218Z * DONE (stringr) 2021-05-17T18:14:24.6862351Z * installing *source* package ‘rversions’ ... 2021-05-17T18:14:24.6873488Z ** package ‘rversions’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:24.6874546Z ** using staged installation 2021-05-17T18:14:24.7010824Z ** R 2021-05-17T18:14:24.7045795Z ** inst 2021-05-17T18:14:24.7052605Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:25.0137638Z ** help 2021-05-17T18:14:25.0324040Z *** installing help indices 2021-05-17T18:14:25.0527389Z *** copying figures 2021-05-17T18:14:25.0530586Z ** building package indices 2021-05-17T18:14:25.2450417Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:25.4448968Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:25.6426996Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:25.6433688Z * DONE (rversions) 2021-05-17T18:14:26.0492093Z * installing *source* package ‘pillar’ ... 2021-05-17T18:14:26.0590527Z ** package ‘pillar’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:26.0591811Z ** using staged installation 2021-05-17T18:14:26.0768781Z ** R 2021-05-17T18:14:26.0942674Z ** inst 2021-05-17T18:14:26.0972072Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:27.7291724Z ** help 2021-05-17T18:14:27.8097707Z *** installing help indices 2021-05-17T18:14:27.8678136Z *** copying figures 2021-05-17T18:14:27.8682492Z ** building package indices 2021-05-17T18:14:28.0981745Z ** installing vignettes 2021-05-17T18:14:28.1063531Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:28.3901862Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:28.6913214Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:28.6936043Z * DONE (pillar) 2021-05-17T18:14:28.9471131Z * installing *source* package ‘callr’ ... 2021-05-17T18:14:28.9497540Z ** package ‘callr’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:28.9499098Z ** using staged installation 2021-05-17T18:14:28.9628874Z ** R 2021-05-17T18:14:28.9754265Z ** inst 2021-05-17T18:14:28.9761101Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:31.9735488Z ** help 2021-05-17T18:14:32.0888113Z *** installing help indices 2021-05-17T18:14:32.1580288Z ** building package indices 2021-05-17T18:14:32.3963683Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:32.5894945Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:32.8381966Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:32.8415425Z * DONE (callr) 2021-05-17T18:14:33.2884304Z * installing *source* package ‘knitr’ ... 2021-05-17T18:14:33.2993633Z ** package ‘knitr’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:33.2995492Z ** using staged installation 2021-05-17T18:14:33.3333056Z ** R 2021-05-17T18:14:33.3695883Z ** demo 2021-05-17T18:14:33.3703263Z ** inst 2021-05-17T18:14:33.3801685Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:37.3469183Z ** help 2021-05-17T18:14:37.5323409Z *** installing help indices 2021-05-17T18:14:37.6508601Z ** building package indices 2021-05-17T18:14:37.9316297Z ** installing vignettes 2021-05-17T18:14:37.9402011Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:38.1248708Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:38.3947161Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:38.3998344Z * DONE (knitr) 2021-05-17T18:14:38.6006159Z * installing *source* package ‘xopen’ ... 2021-05-17T18:14:38.6015120Z ** package ‘xopen’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:38.6017265Z ** using staged installation 2021-05-17T18:14:38.6160196Z ** R 2021-05-17T18:14:38.6184265Z ** inst 2021-05-17T18:14:38.6192015Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:38.8499537Z ** help 2021-05-17T18:14:38.8593724Z *** installing help indices 2021-05-17T18:14:38.8805329Z ** building package indices 2021-05-17T18:14:39.0579434Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:39.2223544Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:39.3850340Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:39.3855775Z * DONE (xopen) 2021-05-17T18:14:39.7750719Z * installing *source* package ‘tibble’ ... 2021-05-17T18:14:39.7843306Z ** package ‘tibble’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:39.7844385Z ** using staged installation 2021-05-17T18:14:39.8039321Z ** libs 2021-05-17T18:14:39.8094907Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c attributes.c -o attributes.o 2021-05-17T18:14:39.8536924Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c coerce.c -o coerce.o 2021-05-17T18:14:39.9141208Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:14:39.9487382Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c matrixToDataFrame.c -o matrixToDataFrame.o 2021-05-17T18:14:40.0401588Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:14:40.0620258Z installing to /home/runner/work/_temp/Library/00LOCK-tibble/00new/tibble/libs 2021-05-17T18:14:40.0627036Z ** R 2021-05-17T18:14:40.0780870Z ** inst 2021-05-17T18:14:40.0809320Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:41.7301210Z ** help 2021-05-17T18:14:41.8004551Z *** installing help indices 2021-05-17T18:14:41.8465257Z *** copying figures 2021-05-17T18:14:41.8470507Z ** building package indices 2021-05-17T18:14:42.0633077Z ** installing vignettes 2021-05-17T18:14:42.0704136Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:42.4002818Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:14:42.4174500Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:42.7756063Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:42.7776664Z * DONE (tibble) 2021-05-17T18:14:43.0206374Z * installing *source* package ‘pkgbuild’ ... 2021-05-17T18:14:43.0224271Z ** package ‘pkgbuild’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:43.0225368Z ** using staged installation 2021-05-17T18:14:43.0366232Z ** R 2021-05-17T18:14:43.0441472Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:14:44.1477450Z ** help 2021-05-17T18:14:44.1831555Z *** installing help indices 2021-05-17T18:14:44.2173006Z ** building package indices 2021-05-17T18:14:44.4181240Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:14:44.6621447Z ** testing if installed package can be loaded from final location 2021-05-17T18:14:44.9206450Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:14:44.9220574Z * DONE (pkgbuild) 2021-05-17T18:14:45.2869032Z * installing *source* package ‘roxygen2’ ... 2021-05-17T18:14:45.2940380Z ** package ‘roxygen2’ successfully unpacked and MD5 sums checked 2021-05-17T18:14:45.2941617Z ** using staged installation 2021-05-17T18:14:45.3122812Z ** libs 2021-05-17T18:14:45.3176879Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-17T18:14:49.6290907Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c escapeExamples.cpp -o escapeExamples.o 2021-05-17T18:14:52.4413140Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c isComplete.cpp -o isComplete.o 2021-05-17T18:14:55.2815560Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c leadingSpaces.cpp -o leadingSpaces.o 2021-05-17T18:14:58.1235059Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c parser2.cpp -o parser2.o 2021-05-17T18:15:02.6442497Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c wrapUsage.cpp -o wrapUsage.o 2021-05-17T18:15:05.6338918Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o roxygen2.so RcppExports.o escapeExamples.o isComplete.o leadingSpaces.o parser2.o wrapUsage.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:15:05.7301459Z installing to /home/runner/work/_temp/Library/00LOCK-roxygen2/00new/roxygen2/libs 2021-05-17T18:15:05.7311273Z ** R 2021-05-17T18:15:05.7595014Z ** inst 2021-05-17T18:15:05.7611762Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:15:09.5436239Z ** help 2021-05-17T18:15:09.6132787Z *** installing help indices 2021-05-17T18:15:09.6632896Z *** copying figures 2021-05-17T18:15:09.6635139Z ** building package indices 2021-05-17T18:15:09.8868537Z ** installing vignettes 2021-05-17T18:15:09.8961707Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:15:10.2302169Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:15:10.2498214Z ** testing if installed package can be loaded from final location 2021-05-17T18:15:10.6564141Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:15:10.6601250Z * DONE (roxygen2) 2021-05-17T18:15:10.8785110Z * installing *source* package ‘rematch2’ ... 2021-05-17T18:15:10.8796348Z ** package ‘rematch2’ successfully unpacked and MD5 sums checked 2021-05-17T18:15:10.8811345Z ** using staged installation 2021-05-17T18:15:10.8929845Z ** R 2021-05-17T18:15:10.8969956Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:15:11.3619589Z ** help 2021-05-17T18:15:11.3886724Z *** installing help indices 2021-05-17T18:15:11.4092602Z ** building package indices 2021-05-17T18:15:11.6017469Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:15:11.9351621Z ** testing if installed package can be loaded from final location 2021-05-17T18:15:12.2619545Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:15:12.2633206Z * DONE (rematch2) 2021-05-17T18:15:12.5086327Z * installing *source* package ‘rcmdcheck’ ... 2021-05-17T18:15:12.5110197Z ** package ‘rcmdcheck’ successfully unpacked and MD5 sums checked 2021-05-17T18:15:12.5111431Z ** using staged installation 2021-05-17T18:15:12.5242172Z ** R 2021-05-17T18:15:12.5316023Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:15:13.6859569Z ** help 2021-05-17T18:15:13.7178483Z *** installing help indices 2021-05-17T18:15:13.7456367Z ** building package indices 2021-05-17T18:15:13.9446223Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:15:14.2161721Z ** testing if installed package can be loaded from final location 2021-05-17T18:15:14.5030309Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:15:14.5043760Z * DONE (rcmdcheck) 2021-05-17T18:15:14.7420741Z * installing *source* package ‘waldo’ ... 2021-05-17T18:15:14.7439284Z ** package ‘waldo’ successfully unpacked and MD5 sums checked 2021-05-17T18:15:14.7440495Z ** using staged installation 2021-05-17T18:15:14.7582566Z ** R 2021-05-17T18:15:14.7647065Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:15:15.4540792Z ** help 2021-05-17T18:15:15.4677412Z *** installing help indices 2021-05-17T18:15:15.4851895Z *** copying figures 2021-05-17T18:15:15.4854185Z ** building package indices 2021-05-17T18:15:15.6765024Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:15:15.9131450Z ** testing if installed package can be loaded from final location 2021-05-17T18:15:16.1529749Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:15:16.1537865Z * DONE (waldo) 2021-05-17T18:15:16.6388940Z * installing *source* package ‘testthat’ ... 2021-05-17T18:15:16.6508531Z ** package ‘testthat’ successfully unpacked and MD5 sums checked 2021-05-17T18:15:16.6509964Z ** using staged installation 2021-05-17T18:15:16.6721377Z ** libs 2021-05-17T18:15:16.6772396Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:15:16.7215084Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-17T18:15:16.7693435Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-catch.cpp -o test-catch.o 2021-05-17T18:15:17.4963498Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-example.cpp -o test-example.o 2021-05-17T18:15:18.0693570Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-runner.cpp -o test-runner.o 2021-05-17T18:15:34.1305050Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:15:34.2890129Z installing to /home/runner/work/_temp/Library/00LOCK-testthat/00new/testthat/libs 2021-05-17T18:15:34.2997176Z ** R 2021-05-17T18:15:34.3333953Z ** inst 2021-05-17T18:15:34.3366213Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:15:43.8182017Z ** help 2021-05-17T18:15:44.0240299Z *** installing help indices 2021-05-17T18:15:44.1816364Z *** copying figures 2021-05-17T18:15:44.1821365Z ** building package indices 2021-05-17T18:15:44.4868657Z ** installing vignettes 2021-05-17T18:15:44.4990323Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:15:44.7062761Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:15:44.7287055Z ** testing if installed package can be loaded from final location 2021-05-17T18:15:45.1507138Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:15:45.1586954Z * DONE (testthat) 2021-05-17T18:15:45.5100440Z * installing *source* package ‘devtools’ ... 2021-05-17T18:15:45.5155170Z ** package ‘devtools’ successfully unpacked and MD5 sums checked 2021-05-17T18:15:45.5156432Z ** using staged installation 2021-05-17T18:15:45.5432584Z ** R 2021-05-17T18:15:45.5560771Z ** inst 2021-05-17T18:15:45.5570519Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:15:47.2174219Z ** help 2021-05-17T18:15:47.3241521Z *** installing help indices 2021-05-17T18:15:47.3965697Z *** copying figures 2021-05-17T18:15:47.3967052Z ** building package indices 2021-05-17T18:15:47.6459592Z ** installing vignettes 2021-05-17T18:15:47.6520499Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:15:48.2838961Z ** testing if installed package can be loaded from final location 2021-05-17T18:15:48.9443685Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:15:48.9463871Z * DONE (devtools) 2021-05-17T18:15:48.9552588Z 2021-05-17T18:15:48.9553632Z The downloaded source packages are in 2021-05-17T18:15:48.9555063Z ‘/tmp/RtmpmLgIuU/downloaded_packages’ 2021-05-17T18:15:49.0780154Z Downloading GitHub repo muschellij2/desc@HEAD 2021-05-17T18:15:49.7954427Z 2021-05-17T18:15:50.0764274Z 2021-05-17T18:15:50.0774990Z checking for file ‘/tmp/RtmpmLgIuU/remotes7284239cacc4/muschellij2-desc-7be86f2/DESCRIPTION’ ... 2021-05-17T18:15:50.0807579Z 2021-05-17T18:15:50.0809270Z ✔ checking for file ‘/tmp/RtmpmLgIuU/remotes7284239cacc4/muschellij2-desc-7be86f2/DESCRIPTION’ 2021-05-17T18:15:50.0894465Z 2021-05-17T18:15:50.0894896Z 2021-05-17T18:15:50.0895589Z ─ preparing ‘desc’: 2021-05-17T18:15:50.0895881Z 2021-05-17T18:15:50.0896182Z 2021-05-17T18:15:50.0997202Z checking DESCRIPTION meta-information ... 2021-05-17T18:15:50.1015876Z 2021-05-17T18:15:50.1017262Z ✔ checking DESCRIPTION meta-information 2021-05-17T18:15:50.1659177Z 2021-05-17T18:15:50.1783007Z 2021-05-17T18:15:50.1785730Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-17T18:15:50.1795128Z 2021-05-17T18:15:50.1815088Z 2021-05-17T18:15:50.1817252Z ─ checking for empty or unneeded directories 2021-05-17T18:15:50.1820304Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-17T18:15:50.1839573Z ─ building ‘desc_1.2.0.9000.tar.gz’ 2021-05-17T18:15:50.2812163Z 2021-05-17T18:15:50.2814998Z 2021-05-17T18:15:50.2815581Z 2021-05-17T18:15:50.2912007Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:15:50.2912988Z (as ‘lib’ is unspecified) 2021-05-17T18:15:50.5787297Z * installing *source* package ‘desc’ ... 2021-05-17T18:15:50.5817801Z ** using staged installation 2021-05-17T18:15:50.5984434Z ** R 2021-05-17T18:15:50.6111706Z ** inst 2021-05-17T18:15:50.6127854Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:15:52.0976375Z ** help 2021-05-17T18:15:52.2217915Z *** installing help indices 2021-05-17T18:15:52.3066622Z ** building package indices 2021-05-17T18:15:52.5678081Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:15:52.7455355Z ** testing if installed package can be loaded from final location 2021-05-17T18:15:52.9534942Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:15:52.9551281Z * DONE (desc) 2021-05-17T18:15:53.1506505Z 2021-05-17T18:15:53.1507391Z 2021-05-17T18:15:53.1519983Z checking for file ‘/tmp/RtmpmLgIuU/remotes72845befe111/muschellij2-ghtravis-0b26809/DESCRIPTION’ ... 2021-05-17T18:15:53.1547822Z 2021-05-17T18:15:53.1549590Z ✔ checking for file ‘/tmp/RtmpmLgIuU/remotes72845befe111/muschellij2-ghtravis-0b26809/DESCRIPTION’ 2021-05-17T18:15:53.1622979Z 2021-05-17T18:15:53.1623602Z 2021-05-17T18:15:53.1624501Z ─ preparing ‘ghtravis’: 2021-05-17T18:15:53.1624938Z 2021-05-17T18:15:53.1625379Z 2021-05-17T18:15:53.1702907Z checking DESCRIPTION meta-information ... 2021-05-17T18:15:53.1722265Z 2021-05-17T18:15:53.1724114Z ✔ checking DESCRIPTION meta-information 2021-05-17T18:15:53.2085632Z 2021-05-17T18:15:53.2110992Z 2021-05-17T18:15:53.2113732Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-17T18:15:53.2122139Z 2021-05-17T18:15:53.2143403Z 2021-05-17T18:15:53.2145666Z ─ checking for empty or unneeded directories 2021-05-17T18:15:53.2148734Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-17T18:15:53.2229680Z 2021-05-17T18:15:53.2248570Z 2021-05-17T18:15:53.2250474Z ─ building ‘ghtravis_0.15.1.tar.gz’ 2021-05-17T18:15:53.2456205Z 2021-05-17T18:15:53.2459262Z 2021-05-17T18:15:53.2460778Z 2021-05-17T18:15:53.2761866Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:15:53.2763320Z (as ‘lib’ is unspecified) 2021-05-17T18:15:53.5054118Z * installing *source* package ‘ghtravis’ ... 2021-05-17T18:15:53.5055571Z ** using staged installation 2021-05-17T18:15:53.5196067Z ** R 2021-05-17T18:15:53.5276599Z ** inst 2021-05-17T18:15:53.5286548Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:15:54.7305266Z ** help 2021-05-17T18:15:54.7856504Z *** installing help indices 2021-05-17T18:15:54.8276678Z ** building package indices 2021-05-17T18:15:55.0516722Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:15:55.7365823Z ** testing if installed package can be loaded from final location 2021-05-17T18:15:56.4058074Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:15:56.4059116Z * DONE (ghtravis) 2021-05-17T18:15:56.4131500Z Using github PAT from envvar GITHUB_PAT 2021-05-17T18:15:56.5910112Z Downloading GitHub repo muschellij2/aghast@HEAD 2021-05-17T18:15:57.3819350Z 2021-05-17T18:15:57.3821146Z Installing 5 packages: tidyselect, generics, cpp11, dplyr, tidyr 2021-05-17T18:15:57.3822571Z tidyselect (NA -> 1.1.1) [CRAN] 2021-05-17T18:15:57.3823808Z generics (NA -> 0.1.0) [CRAN] 2021-05-17T18:15:57.3824682Z cpp11 (NA -> 0.2.7) [CRAN] 2021-05-17T18:15:57.3825489Z dplyr (NA -> 1.0.6) [CRAN] 2021-05-17T18:15:57.3826302Z tidyr (NA -> 1.1.3) [CRAN] 2021-05-17T18:15:57.3831047Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:15:57.3832069Z (as ‘lib’ is unspecified) 2021-05-17T18:16:11.0946305Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyselect_1.1.1.tar.gz' 2021-05-17T18:16:11.6012441Z Content type 'binary/octet-stream' length 92124 bytes (89 KB) 2021-05-17T18:16:11.6063906Z ================================================== 2021-05-17T18:16:11.6064663Z downloaded 89 KB 2021-05-17T18:16:11.6065126Z 2021-05-17T18:16:11.6098408Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/generics_0.1.0.tar.gz' 2021-05-17T18:16:11.9429841Z Content type 'binary/octet-stream' length 118869 bytes (116 KB) 2021-05-17T18:16:11.9484804Z ================================================== 2021-05-17T18:16:11.9485647Z downloaded 116 KB 2021-05-17T18:16:11.9486218Z 2021-05-17T18:16:11.9519750Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/cpp11_0.2.7.tar.gz' 2021-05-17T18:16:12.2677635Z Content type 'binary/octet-stream' length 200157 bytes (195 KB) 2021-05-17T18:16:12.2880773Z ================================================== 2021-05-17T18:16:12.2881541Z downloaded 195 KB 2021-05-17T18:16:12.2882022Z 2021-05-17T18:16:12.2914106Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/dplyr_1.0.6.tar.gz' 2021-05-17T18:16:12.7136262Z Content type 'binary/octet-stream' length 954544 bytes (932 KB) 2021-05-17T18:16:12.7408636Z ================================================== 2021-05-17T18:16:12.7409469Z downloaded 932 KB 2021-05-17T18:16:12.7409870Z 2021-05-17T18:16:12.7442970Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tidyr_1.1.3.tar.gz' 2021-05-17T18:16:13.4146509Z Content type 'binary/octet-stream' length 706784 bytes (690 KB) 2021-05-17T18:16:13.4394340Z ================================================== 2021-05-17T18:16:13.4395246Z downloaded 690 KB 2021-05-17T18:16:13.4395702Z 2021-05-17T18:16:13.7020399Z * installing *source* package ‘tidyselect’ ... 2021-05-17T18:16:13.7049232Z ** package ‘tidyselect’ successfully unpacked and MD5 sums checked 2021-05-17T18:16:13.7050494Z ** using staged installation 2021-05-17T18:16:13.7204703Z ** R 2021-05-17T18:16:13.7289772Z ** inst 2021-05-17T18:16:13.7301358Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:16:14.6779675Z ** help 2021-05-17T18:16:14.7303091Z *** installing help indices 2021-05-17T18:16:14.7724190Z ** building package indices 2021-05-17T18:16:14.9819633Z ** installing vignettes 2021-05-17T18:16:14.9850718Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:16:15.2309747Z ** testing if installed package can be loaded from final location 2021-05-17T18:16:15.4849204Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:16:15.4860523Z * DONE (tidyselect) 2021-05-17T18:16:15.7513036Z * installing *source* package ‘generics’ ... 2021-05-17T18:16:15.7544091Z ** package ‘generics’ successfully unpacked and MD5 sums checked 2021-05-17T18:16:15.7545811Z ** using staged installation 2021-05-17T18:16:15.7675748Z ** R 2021-05-17T18:16:15.7727819Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:16:16.0661933Z ** help 2021-05-17T18:16:16.1803977Z *** installing help indices 2021-05-17T18:16:16.2237197Z ** building package indices 2021-05-17T18:16:16.4519850Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:16:16.6274716Z ** testing if installed package can be loaded from final location 2021-05-17T18:16:16.8031670Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:16:16.8037580Z * DONE (generics) 2021-05-17T18:16:17.0677954Z * installing *source* package ‘cpp11’ ... 2021-05-17T18:16:17.0710790Z ** package ‘cpp11’ successfully unpacked and MD5 sums checked 2021-05-17T18:16:17.0711975Z ** using staged installation 2021-05-17T18:16:17.0862585Z ** R 2021-05-17T18:16:17.0904732Z ** inst 2021-05-17T18:16:17.0933277Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:16:17.4821895Z ** help 2021-05-17T18:16:17.5027014Z *** installing help indices 2021-05-17T18:16:17.5204358Z ** building package indices 2021-05-17T18:16:17.7095242Z ** installing vignettes 2021-05-17T18:16:17.7096105Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:16:17.8821512Z ** testing if installed package can be loaded from final location 2021-05-17T18:16:18.0530484Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:16:18.0539664Z * DONE (cpp11) 2021-05-17T18:16:18.5389905Z * installing *source* package ‘dplyr’ ... 2021-05-17T18:16:18.5514361Z ** package ‘dplyr’ successfully unpacked and MD5 sums checked 2021-05-17T18:16:18.5515769Z ** using staged installation 2021-05-17T18:16:18.5727256Z ** libs 2021-05-17T18:16:18.5776481Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c chop.cpp -o chop.o 2021-05-17T18:16:18.7087818Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c filter.cpp -o filter.o 2021-05-17T18:16:18.8659329Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c funs.cpp -o funs.o 2021-05-17T18:16:18.9870583Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_by.cpp -o group_by.o 2021-05-17T18:16:19.4957327Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c group_data.cpp -o group_data.o 2021-05-17T18:16:19.5963251Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c imports.cpp -o imports.o 2021-05-17T18:16:19.7008924Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.cpp -o init.o 2021-05-17T18:16:19.8083330Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mask.cpp -o mask.o 2021-05-17T18:16:19.9318536Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mutate.cpp -o mutate.o 2021-05-17T18:16:20.0502645Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c slice.cpp -o slice.o 2021-05-17T18:16:20.1424596Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c summarise.cpp -o summarise.o 2021-05-17T18:16:20.2993839Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o slice.o summarise.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:16:20.3620559Z installing to /home/runner/work/_temp/Library/00LOCK-dplyr/00new/dplyr/libs 2021-05-17T18:16:20.3637310Z ** R 2021-05-17T18:16:20.4066294Z ** data 2021-05-17T18:16:20.4071235Z *** moving datasets to lazyload DB 2021-05-17T18:16:20.4980354Z ** inst 2021-05-17T18:16:20.5007014Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:16:24.8171746Z ** help 2021-05-17T18:16:25.2946322Z *** installing help indices 2021-05-17T18:16:25.5282037Z *** copying figures 2021-05-17T18:16:25.5288216Z ** building package indices 2021-05-17T18:16:25.8790664Z ** installing vignettes 2021-05-17T18:16:25.8918845Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:16:26.3547289Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:16:26.3722140Z ** testing if installed package can be loaded from final location 2021-05-17T18:16:26.9105829Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:16:26.9152193Z * DONE (dplyr) 2021-05-17T18:16:27.2648899Z * installing *source* package ‘tidyr’ ... 2021-05-17T18:16:27.2719461Z ** package ‘tidyr’ successfully unpacked and MD5 sums checked 2021-05-17T18:16:27.2720721Z ** using staged installation 2021-05-17T18:16:27.2890897Z ** libs 2021-05-17T18:16:27.2949113Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c cpp11.cpp -o cpp11.o 2021-05-17T18:16:28.2075140Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c fill.cpp -o fill.o 2021-05-17T18:16:28.5252431Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c melt.cpp -o melt.o 2021-05-17T18:16:30.1104911Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I'/home/runner/work/_temp/Library/cpp11/include' -I/usr/local/include -fpic -g -O2 -c simplifyPieces.cpp -o simplifyPieces.o 2021-05-17T18:16:31.3423153Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o tidyr.so cpp11.o fill.o melt.o simplifyPieces.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:16:31.4180760Z installing to /home/runner/work/_temp/Library/00LOCK-tidyr/00new/tidyr/libs 2021-05-17T18:16:31.4201668Z ** R 2021-05-17T18:16:31.4356354Z ** data 2021-05-17T18:16:31.4367749Z *** moving datasets to lazyload DB 2021-05-17T18:16:31.6217539Z ** inst 2021-05-17T18:16:31.6239414Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:16:33.2628206Z ** help 2021-05-17T18:16:33.3764294Z *** installing help indices 2021-05-17T18:16:33.4507436Z *** copying figures 2021-05-17T18:16:33.4512610Z ** building package indices 2021-05-17T18:16:33.7019653Z ** installing vignettes 2021-05-17T18:16:33.7110579Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:16:34.1854708Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:16:34.2044083Z ** testing if installed package can be loaded from final location 2021-05-17T18:16:34.6963555Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:16:34.6981477Z * DONE (tidyr) 2021-05-17T18:16:34.7099967Z 2021-05-17T18:16:34.7101072Z The downloaded source packages are in 2021-05-17T18:16:34.7102555Z ‘/tmp/RtmpmLgIuU/downloaded_packages’ 2021-05-17T18:16:34.8900078Z 2021-05-17T18:16:34.8916131Z checking for file ‘/tmp/RtmpmLgIuU/remotes72845b43712e/muschellij2-aghast-0c3b853/DESCRIPTION’ ... 2021-05-17T18:16:34.8933025Z 2021-05-17T18:16:34.8934761Z ✔ checking for file ‘/tmp/RtmpmLgIuU/remotes72845b43712e/muschellij2-aghast-0c3b853/DESCRIPTION’ 2021-05-17T18:16:34.9020670Z 2021-05-17T18:16:34.9021457Z 2021-05-17T18:16:34.9022426Z ─ preparing ‘aghast’: 2021-05-17T18:16:34.9022934Z 2021-05-17T18:16:34.9023418Z 2021-05-17T18:16:34.9099719Z checking DESCRIPTION meta-information ... 2021-05-17T18:16:34.9120502Z 2021-05-17T18:16:34.9122466Z ✔ checking DESCRIPTION meta-information 2021-05-17T18:16:34.9358545Z 2021-05-17T18:16:34.9384175Z 2021-05-17T18:16:34.9386852Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-17T18:16:34.9395626Z 2021-05-17T18:16:34.9416954Z 2021-05-17T18:16:34.9419825Z ─ checking for empty or unneeded directories 2021-05-17T18:16:34.9424210Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-17T18:16:34.9434347Z 2021-05-17T18:16:34.9455179Z 2021-05-17T18:16:34.9457236Z ─ building ‘aghast_0.2.1.tar.gz’ 2021-05-17T18:16:34.9542390Z 2021-05-17T18:16:34.9544516Z 2021-05-17T18:16:34.9545872Z 2021-05-17T18:16:34.9616156Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:16:34.9617199Z (as ‘lib’ is unspecified) 2021-05-17T18:16:35.1658427Z * installing *source* package ‘aghast’ ... 2021-05-17T18:16:35.1660269Z ** using staged installation 2021-05-17T18:16:35.1818233Z ** R 2021-05-17T18:16:35.1871942Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:16:35.6135350Z ** help 2021-05-17T18:16:35.6432691Z *** installing help indices 2021-05-17T18:16:35.6651067Z ** building package indices 2021-05-17T18:16:35.8581870Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:16:36.0323557Z ** testing if installed package can be loaded from final location 2021-05-17T18:16:36.2101331Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:16:36.2108624Z * DONE (aghast) 2021-05-17T18:16:36.2192625Z Installing 1 packages: covr 2021-05-17T18:16:36.2200746Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:16:49.9298138Z (as ‘lib’ is unspecified) 2021-05-17T18:16:49.9299504Z also installing the dependencies ‘lazyeval’, ‘rex’ 2021-05-17T18:16:49.9300000Z 2021-05-17T18:16:49.9301877Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/lazyeval_0.2.2.tar.gz' 2021-05-17T18:16:50.4365873Z Content type 'application/x-tar' length 83462 bytes (81 KB) 2021-05-17T18:16:50.4456296Z ================================================== 2021-05-17T18:16:50.4457294Z downloaded 81 KB 2021-05-17T18:16:50.4457835Z 2021-05-17T18:16:50.4490608Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rex_1.2.0.tar.gz' 2021-05-17T18:16:50.9547201Z Content type 'binary/octet-stream' length 91701 bytes (89 KB) 2021-05-17T18:16:50.9600794Z ================================================== 2021-05-17T18:16:50.9601346Z downloaded 89 KB 2021-05-17T18:16:50.9601670Z 2021-05-17T18:16:50.9639130Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/covr_3.5.1.tar.gz' 2021-05-17T18:16:51.4705548Z Content type 'binary/octet-stream' length 147467 bytes (144 KB) 2021-05-17T18:16:51.4820358Z ================================================== 2021-05-17T18:16:51.4820916Z downloaded 144 KB 2021-05-17T18:16:51.4821199Z 2021-05-17T18:16:51.7291480Z * installing *source* package ‘lazyeval’ ... 2021-05-17T18:16:51.7317066Z ** package ‘lazyeval’ successfully unpacked and MD5 sums checked 2021-05-17T18:16:51.7318283Z ** using staged installation 2021-05-17T18:16:51.7438099Z ** libs 2021-05-17T18:16:51.7485590Z 2021-05-17T18:16:51.7487146Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o 2021-05-17T18:16:51.8061796Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:16:51.8415051Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o 2021-05-17T18:16:51.9011817Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o 2021-05-17T18:16:51.9742246Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o 2021-05-17T18:16:52.0345770Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o 2021-05-17T18:16:52.1026162Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:16:52.1260390Z installing to /home/runner/work/_temp/Library/00LOCK-lazyeval/00new/lazyeval/libs 2021-05-17T18:16:52.1264175Z ** R 2021-05-17T18:16:52.1327080Z ** inst 2021-05-17T18:16:52.1338770Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:16:52.6113265Z ** help 2021-05-17T18:16:52.6642175Z *** installing help indices 2021-05-17T18:16:52.7072626Z ** building package indices 2021-05-17T18:16:52.9299694Z ** installing vignettes 2021-05-17T18:16:52.9341804Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:16:53.1135390Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:16:53.1314021Z ** testing if installed package can be loaded from final location 2021-05-17T18:16:53.3091362Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:16:53.3100949Z * DONE (lazyeval) 2021-05-17T18:16:53.5581195Z * installing *source* package ‘rex’ ... 2021-05-17T18:16:53.5605213Z ** package ‘rex’ successfully unpacked and MD5 sums checked 2021-05-17T18:16:53.5606383Z ** using staged installation 2021-05-17T18:16:53.5739843Z ** R 2021-05-17T18:16:53.5793118Z ** inst 2021-05-17T18:16:53.5803945Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:16:54.0504169Z ** help 2021-05-17T18:16:54.0988728Z *** installing help indices 2021-05-17T18:16:54.1350876Z ** building package indices 2021-05-17T18:16:54.3403367Z ** installing vignettes 2021-05-17T18:16:54.3496528Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:16:54.5178283Z ** testing if installed package can be loaded from final location 2021-05-17T18:16:54.6896461Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:16:54.6905244Z * DONE (rex) 2021-05-17T18:16:55.0373220Z * installing *source* package ‘covr’ ... 2021-05-17T18:16:55.0428677Z ** package ‘covr’ successfully unpacked and MD5 sums checked 2021-05-17T18:16:55.0429915Z ** using staged installation 2021-05-17T18:16:55.0629398Z ** libs 2021-05-17T18:16:55.0677136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o 2021-05-17T18:16:55.1202937Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o covr.so reassign.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:16:55.1350619Z installing to /home/runner/work/_temp/Library/00LOCK-covr/00new/covr/libs 2021-05-17T18:16:55.1364936Z ** R 2021-05-17T18:16:55.1495247Z ** inst 2021-05-17T18:16:55.1516499Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:16:56.3842020Z ** help 2021-05-17T18:16:56.4428900Z *** installing help indices 2021-05-17T18:16:56.4880037Z *** copying figures 2021-05-17T18:16:56.4881496Z ** building package indices 2021-05-17T18:16:56.7030336Z ** installing vignettes 2021-05-17T18:16:56.7086689Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:16:56.8953861Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:16:56.9124268Z ** testing if installed package can be loaded from final location 2021-05-17T18:16:57.1198144Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:16:57.1215478Z * DONE (covr) 2021-05-17T18:16:57.1304263Z 2021-05-17T18:16:57.1305170Z The downloaded source packages are in 2021-05-17T18:16:57.1306541Z ‘/tmp/RtmpmLgIuU/downloaded_packages’ 2021-05-17T18:16:57.1437404Z ##[group]Run Rscript -e "tic::before_install()" 2021-05-17T18:16:57.1438000Z Rscript -e "tic::before_install()" 2021-05-17T18:16:57.1482694Z shell: /usr/bin/bash -e {0} 2021-05-17T18:16:57.1483086Z env: 2021-05-17T18:16:57.1483525Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:16:57.1483968Z TIC_DEPLOY_KEY: 2021-05-17T18:16:57.1484752Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:16:57.1486364Z GITHUB_PAT: *** 2021-05-17T18:16:57.1487202Z COVERALLS_TOKEN: *** 2021-05-17T18:16:57.1487682Z continue-on-error: true 2021-05-17T18:16:57.1488127Z VDIFFR_RUN_TESTS: 2021-05-17T18:16:57.1488593Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:16:57.1489022Z TZ: UTC 2021-05-17T18:16:57.1489386Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:16:57.1489785Z NOT_CRAN: true 2021-05-17T18:16:57.1490136Z ##[endgroup] 2021-05-17T18:16:57.4356643Z ✔ Loading tic stage configuration from tic.R 2021-05-17T18:16:57.5589003Z Running before_install: step_install_remote_binaries() 2021-05-17T18:16:58.0755346Z Installing RNifti binaries 2021-05-17T18:16:58.0765704Z [1] "neuroconductor/RNifti" 2021-05-17T18:16:58.3064897Z OK (HTTP 200).OK (HTTP 200).No Binaries Found, exiting 2021-05-17T18:16:58.3197821Z ##[group]Run remotes::install_deps(dependencies = TRUE) 2021-05-17T18:16:58.3198572Z remotes::install_deps(dependencies = TRUE) 2021-05-17T18:16:58.3199191Z remotes::install_cran("rcmdcheck") 2021-05-17T18:16:58.3199728Z remotes::install_cran("markdown") 2021-05-17T18:16:58.3206638Z shell: /usr/local/bin/Rscript {0} 2021-05-17T18:16:58.3207029Z env: 2021-05-17T18:16:58.3207460Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:16:58.3207910Z TIC_DEPLOY_KEY: 2021-05-17T18:16:58.3208690Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:16:58.3210213Z GITHUB_PAT: *** 2021-05-17T18:16:58.3211045Z COVERALLS_TOKEN: *** 2021-05-17T18:16:58.3211523Z continue-on-error: true 2021-05-17T18:16:58.3211983Z VDIFFR_RUN_TESTS: 2021-05-17T18:16:58.3212439Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:16:58.3212877Z TZ: UTC 2021-05-17T18:16:58.3213243Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:16:58.3213693Z NOT_CRAN: true 2021-05-17T18:16:58.3214047Z ##[endgroup] 2021-05-17T18:17:15.0703215Z RNifti (NA -> 929106d1b...) [GitHub] 2021-05-17T18:17:15.0704920Z base64enc (NA -> 0.1-3 ) [CRAN] 2021-05-17T18:17:15.0705974Z hunspell (NA -> 3.0.1 ) [CRAN] 2021-05-17T18:17:15.0706959Z tinytex (NA -> 0.31 ) [CRAN] 2021-05-17T18:17:15.0707927Z htmltools (NA -> 0.5.1.1 ) [CRAN] 2021-05-17T18:17:15.0708898Z spelling (NA -> 2.2 ) [CRAN] 2021-05-17T18:17:15.0709846Z rmarkdown (NA -> 2.8 ) [CRAN] 2021-05-17T18:17:15.0710824Z matrixStats (NA -> 0.58.0 ) [CRAN] 2021-05-17T18:17:15.2270343Z Downloading GitHub repo neuroconductor/RNifti@929106d1b17d6c09c8b001b5e39d448ed9ef635f 2021-05-17T18:17:16.5454687Z 2021-05-17T18:17:16.7355221Z 2021-05-17T18:17:16.7358312Z checking for file ‘/tmp/RtmpLtHsRr/remotesd50e4bbfe8d/neuroconductor-RNifti-929106d/DESCRIPTION’ ... 2021-05-17T18:17:16.7359592Z 2021-05-17T18:17:16.7365069Z checking for file ‘/tmp/RtmpLtHsRr/remotesd50e4bbfe8d/neuroconductor-RNifti-929106d/DESCRIPTION’ ... 2021-05-17T18:17:16.7422628Z 2021-05-17T18:17:16.7424721Z ✔ checking for file ‘/tmp/RtmpLtHsRr/remotesd50e4bbfe8d/neuroconductor-RNifti-929106d/DESCRIPTION’ 2021-05-17T18:17:16.7579676Z 2021-05-17T18:17:16.7580567Z 2021-05-17T18:17:16.7581433Z ─ preparing ‘RNifti’: 2021-05-17T18:17:16.7581736Z 2021-05-17T18:17:16.7582069Z 2021-05-17T18:17:16.7693826Z checking DESCRIPTION meta-information ... 2021-05-17T18:17:16.7719285Z 2021-05-17T18:17:16.7720305Z ✔ checking DESCRIPTION meta-information 2021-05-17T18:17:16.7725735Z 2021-05-17T18:17:16.7856458Z 2021-05-17T18:17:16.7857437Z ─ cleaning src 2021-05-17T18:17:16.7866242Z 2021-05-17T18:17:16.7891612Z 2021-05-17T18:17:16.7892588Z ─ running ‘cleanup’ 2021-05-17T18:17:16.8342625Z 2021-05-17T18:17:16.8375840Z 2021-05-17T18:17:16.8377246Z ─ checking for LF line-endings in source and make files and shell scripts 2021-05-17T18:17:16.8713268Z 2021-05-17T18:17:16.8736419Z 2021-05-17T18:17:16.8737634Z ─ checking for empty or unneeded directories 2021-05-17T18:17:16.8767875Z 2021-05-17T18:17:16.8788732Z 2021-05-17T18:17:16.8789687Z ─ building ‘RNifti_1.3.1.tar.gz’ 2021-05-17T18:17:17.1694836Z 2021-05-17T18:17:17.1697655Z 2021-05-17T18:17:17.1698156Z 2021-05-17T18:17:17.1834439Z Installing package into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:17:17.1835261Z (as ‘lib’ is unspecified) 2021-05-17T18:17:17.5039561Z * installing *source* package ‘RNifti’ ... 2021-05-17T18:17:17.5042077Z ** using staged installation 2021-05-17T18:17:17.5202388Z ** libs 2021-05-17T18:17:17.5253656Z 2021-05-17T18:17:17.5255835Z g++ -std=gnu++14 -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c main.cpp -o main.o 2021-05-17T18:17:35.3391739Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zzz.c -o zzz.o 2021-05-17T18:17:35.4248531Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/adler32.c -o zlib/adler32.o 2021-05-17T18:17:35.5096364Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/compress.c -o zlib/compress.o 2021-05-17T18:17:35.5481977Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/crc32.c -o zlib/crc32.o 2021-05-17T18:17:35.6555963Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/deflate.c -o zlib/deflate.o 2021-05-17T18:17:36.1097522Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzclose.c -o zlib/gzclose.o 2021-05-17T18:17:36.1514911Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzlib.c -o zlib/gzlib.o 2021-05-17T18:17:36.2703195Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzread.c -o zlib/gzread.o 2021-05-17T18:17:36.4193175Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/gzwrite.c -o zlib/gzwrite.o 2021-05-17T18:17:36.5465847Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/infback.c -o zlib/infback.o 2021-05-17T18:17:36.7777959Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inffast.c -o zlib/inffast.o 2021-05-17T18:17:36.8855332Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inflate.c -o zlib/inflate.o 2021-05-17T18:17:37.3754294Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/inftrees.c -o zlib/inftrees.o 2021-05-17T18:17:37.4670273Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/trees.c -o zlib/trees.o 2021-05-17T18:17:37.7607000Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/uncompr.c -o zlib/uncompr.o 2021-05-17T18:17:37.7962311Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c zlib/zutil.c -o zlib/zutil.o 2021-05-17T18:17:37.8403745Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c znzlib/znzlib.c -o znzlib/znzlib.o 2021-05-17T18:17:37.9166747Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti1_io.c -o niftilib/nifti1_io.o 2021-05-17T18:17:39.0007061Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -Izlib -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c niftilib/nifti2_io.c -o niftilib/nifti2_io.o 2021-05-17T18:17:41.2538373Z g++ -std=gnu++14 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o RNifti.so main.o zzz.o zlib/adler32.o zlib/compress.o zlib/crc32.o zlib/deflate.o zlib/gzclose.o zlib/gzlib.o zlib/gzread.o zlib/gzwrite.o zlib/infback.o zlib/inffast.o zlib/inflate.o zlib/inftrees.o zlib/trees.o zlib/uncompr.o zlib/zutil.o znzlib/znzlib.o niftilib/nifti1_io.o niftilib/nifti2_io.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:17:41.4413147Z installing to /home/runner/work/_temp/Library/00LOCK-RNifti/00new/RNifti/libs 2021-05-17T18:17:41.4544322Z ** R 2021-05-17T18:17:41.4621998Z ** inst 2021-05-17T18:17:41.4652370Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:17:42.2353906Z ** help 2021-05-17T18:17:42.2865325Z *** installing help indices 2021-05-17T18:17:42.3207056Z ** building package indices 2021-05-17T18:17:42.5281770Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:17:42.7912920Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:17:42.8146020Z ** testing if installed package can be loaded from final location 2021-05-17T18:17:43.0766391Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:17:43.0777857Z * DONE (RNifti) 2021-05-17T18:17:43.0938066Z Installing 7 packages: base64enc, hunspell, tinytex, htmltools, spelling, rmarkdown, matrixStats 2021-05-17T18:17:43.0947129Z Installing packages into ‘/home/runner/work/_temp/Library’ 2021-05-17T18:17:43.0947922Z (as ‘lib’ is unspecified) 2021-05-17T18:17:57.4758806Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/base64enc_0.1-3.tar.gz' 2021-05-17T18:17:57.8599279Z Content type 'application/x-tar' length 7843 bytes 2021-05-17T18:17:57.8600791Z ================================================== 2021-05-17T18:17:57.8601652Z downloaded 7843 bytes 2021-05-17T18:17:57.8602662Z 2021-05-17T18:17:57.8636019Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/hunspell_3.0.1.tar.gz' 2021-05-17T18:17:58.3907453Z Content type 'binary/octet-stream' length 3295589 bytes (3.1 MB) 2021-05-17T18:17:58.4354138Z ================================================== 2021-05-17T18:17:58.4355120Z downloaded 3.1 MB 2021-05-17T18:17:58.4355607Z 2021-05-17T18:17:58.4389460Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/tinytex_0.31.tar.gz' 2021-05-17T18:17:58.8514479Z Content type 'binary/octet-stream' length 29350 bytes (28 KB) 2021-05-17T18:17:58.8518303Z ================================================== 2021-05-17T18:17:58.8518817Z downloaded 28 KB 2021-05-17T18:17:58.8519134Z 2021-05-17T18:17:58.8558401Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/htmltools_0.5.1.1.tar.gz' 2021-05-17T18:17:59.2439837Z Content type 'binary/octet-stream' length 72110 bytes (70 KB) 2021-05-17T18:17:59.2506056Z ================================================== 2021-05-17T18:17:59.2506545Z downloaded 70 KB 2021-05-17T18:17:59.2506857Z 2021-05-17T18:17:59.2546240Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/spelling_2.2.tar.gz' 2021-05-17T18:17:59.7605018Z Content type 'binary/octet-stream' length 10825 bytes (10 KB) 2021-05-17T18:17:59.7607613Z ================================================== 2021-05-17T18:17:59.7608501Z downloaded 10 KB 2021-05-17T18:17:59.7608884Z 2021-05-17T18:17:59.7649889Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/rmarkdown_2.8.tar.gz' 2021-05-17T18:18:00.0342700Z Content type 'binary/octet-stream' length 3236609 bytes (3.1 MB) 2021-05-17T18:18:00.1251541Z ================================================== 2021-05-17T18:18:00.1252451Z downloaded 3.1 MB 2021-05-17T18:18:00.1252928Z 2021-05-17T18:18:00.1290709Z trying URL 'https://packagemanager.rstudio.com/cran/__linux__/focal/latest/src/contrib/matrixStats_0.58.0.tar.gz' 2021-05-17T18:18:01.1178138Z Content type 'binary/octet-stream' length 194842 bytes (190 KB) 2021-05-17T18:18:01.1300507Z ================================================== 2021-05-17T18:18:01.1301047Z downloaded 190 KB 2021-05-17T18:18:01.1301330Z 2021-05-17T18:18:01.3254796Z * installing *source* package ‘base64enc’ ... 2021-05-17T18:18:01.3263508Z ** package ‘base64enc’ successfully unpacked and MD5 sums checked 2021-05-17T18:18:01.3265596Z ** using staged installation 2021-05-17T18:18:01.3366128Z ** libs 2021-05-17T18:18:01.3417076Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o 2021-05-17T18:18:01.4470801Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o 2021-05-17T18:18:01.5194808Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o 2021-05-17T18:18:01.5915166Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o base64enc.so base64.o uriencode.o utf8.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:18:01.6140666Z installing to /home/runner/work/_temp/Library/00LOCK-base64enc/00new/base64enc/libs 2021-05-17T18:18:01.6147639Z ** R 2021-05-17T18:18:01.6176417Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:18:02.6833533Z ** help 2021-05-17T18:18:02.6835151Z *** installing help indices 2021-05-17T18:18:02.6835983Z ** building package indices 2021-05-17T18:18:02.6836969Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:18:02.6838095Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:18:02.6839170Z ** testing if installed package can be loaded from final location 2021-05-17T18:18:02.6840352Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:18:02.6841248Z * DONE (base64enc) 2021-05-17T18:18:03.1845046Z * installing *source* package ‘hunspell’ ... 2021-05-17T18:18:03.2175175Z ** package ‘hunspell’ successfully unpacked and MD5 sums checked 2021-05-17T18:18:03.2176793Z ** using staged installation 2021-05-17T18:18:03.2327834Z ** libs 2021-05-17T18:18:03.2390723Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o 2021-05-17T18:18:07.5525823Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c dictionary.cpp -o dictionary.o 2021-05-17T18:18:12.1366671Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parser.cpp -o parser.o 2021-05-17T18:18:15.9084731Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parsers/textparser.cc -o parsers/textparser.o 2021-05-17T18:18:16.7324066Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parsers/latexparser.cc -o parsers/latexparser.o 2021-05-17T18:18:17.1071849Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parsers/manparser.cc -o parsers/manparser.o 2021-05-17T18:18:17.4299771Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parsers/xmlparser.cc -o parsers/xmlparser.o 2021-05-17T18:18:17.9483344Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c parsers/htmlparser.cc -o parsers/htmlparser.o 2021-05-17T18:18:18.2619909Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hunspell/affentry.cc -o hunspell/affentry.o 2021-05-17T18:18:19.1884747Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hunspell/affixmgr.cc -o hunspell/affixmgr.o 2021-05-17T18:18:24.3432050Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hunspell/filemgr.cc -o hunspell/filemgr.o 2021-05-17T18:18:24.7204785Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hunspell/hashmgr.cc -o hunspell/hashmgr.o 2021-05-17T18:18:26.4848840Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hunspell/hunspell.cc -o hunspell/hunspell.o 2021-05-17T18:18:29.8927691Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hunspell/hunzip.cc -o hunspell/hunzip.o 2021-05-17T18:18:30.3774912Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hunspell/phonet.cc -o hunspell/phonet.o 2021-05-17T18:18:30.8420157Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hunspell/replist.cc -o hunspell/replist.o 2021-05-17T18:18:31.3107910Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hunspell/suggestmgr.cc -o hunspell/suggestmgr.o 2021-05-17T18:18:34.3189672Z g++ -std=gnu++11 -I"/opt/R/devel/lib/R/include" -DNDEBUG -I. -Ihunspell -DBUILDING_LIBHUNSPELL -I'/home/runner/work/_temp/Library/Rcpp/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c hunspell/csutil.cc -o hunspell/csutil.o 2021-05-17T18:18:35.8385546Z ar rcs hunspell/libstathunspell.a parsers/textparser.o parsers/latexparser.o parsers/manparser.o parsers/xmlparser.o parsers/htmlparser.o hunspell/affentry.o hunspell/affixmgr.o hunspell/filemgr.o hunspell/hashmgr.o hunspell/hunspell.o hunspell/hunzip.o hunspell/phonet.o hunspell/replist.o hunspell/suggestmgr.o hunspell/csutil.o 2021-05-17T18:18:35.8666748Z g++ -std=gnu++11 -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o hunspell.so RcppExports.o dictionary.o parser.o -Lhunspell -lstathunspell -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:18:36.0271689Z installing to /home/runner/work/_temp/Library/00LOCK-hunspell/00new/hunspell/libs 2021-05-17T18:18:36.0382583Z ** R 2021-05-17T18:18:36.0415372Z ** inst 2021-05-17T18:18:36.0458437Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:18:36.3985188Z ** help 2021-05-17T18:18:36.4107681Z *** installing help indices 2021-05-17T18:18:36.4265992Z ** building package indices 2021-05-17T18:18:36.6067574Z ** installing vignettes 2021-05-17T18:18:36.6119783Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:18:36.8649283Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:18:36.8873264Z ** testing if installed package can be loaded from final location 2021-05-17T18:18:37.1408258Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:18:37.1416263Z * DONE (hunspell) 2021-05-17T18:18:37.3590301Z * installing *source* package ‘tinytex’ ... 2021-05-17T18:18:37.3604868Z ** package ‘tinytex’ successfully unpacked and MD5 sums checked 2021-05-17T18:18:37.3607806Z ** using staged installation 2021-05-17T18:18:37.3804251Z ** R 2021-05-17T18:18:37.3874633Z ** inst 2021-05-17T18:18:37.3883001Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:18:38.0539508Z ** help 2021-05-17T18:18:38.0842909Z *** installing help indices 2021-05-17T18:18:38.1101221Z ** building package indices 2021-05-17T18:18:38.3087239Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:18:38.4863912Z ** testing if installed package can be loaded from final location 2021-05-17T18:18:38.6763766Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:18:38.6773035Z * DONE (tinytex) 2021-05-17T18:18:39.0951196Z * installing *source* package ‘matrixStats’ ... 2021-05-17T18:18:39.1046809Z ** package ‘matrixStats’ successfully unpacked and MD5 sums checked 2021-05-17T18:18:39.1048017Z ** using staged installation 2021-05-17T18:18:39.1190467Z ** libs 2021-05-17T18:18:39.1252519Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c 000.init.c -o 000.init.o 2021-05-17T18:18:39.1654554Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c allocMatrix2.c -o allocMatrix2.o 2021-05-17T18:18:39.2446376Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c anyMissing.c -o anyMissing.o 2021-05-17T18:18:39.3449569Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binCounts.c -o binCounts.o 2021-05-17T18:18:39.4359722Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c binMeans.c -o binMeans.o 2021-05-17T18:18:39.5652090Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colCounts.c -o colCounts.o 2021-05-17T18:18:40.8066570Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colOrderStats.c -o colOrderStats.o 2021-05-17T18:18:41.1454272Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c colRanges.c -o colRanges.o 2021-05-17T18:18:42.5281881Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diff2.c -o diff2.o 2021-05-17T18:18:42.7285944Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c indexByRow.c -o indexByRow.o 2021-05-17T18:18:42.7892660Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c logSumExp.c -o logSumExp.o 2021-05-17T18:18:42.9798707Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c mean2.c -o mean2.o 2021-05-17T18:18:43.1137463Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c productExpSumLog.c -o productExpSumLog.o 2021-05-17T18:18:43.2546145Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c psortKM.c -o psortKM.o 2021-05-17T18:18:43.3185136Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCounts.c -o rowCounts.o 2021-05-17T18:18:44.6409065Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummaxs.c -o rowCummaxs.o 2021-05-17T18:18:45.6047443Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCummins.c -o rowCummins.o 2021-05-17T18:18:46.5710294Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumprods.c -o rowCumprods.o 2021-05-17T18:18:47.3864229Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowCumsums.c -o rowCumsums.o 2021-05-17T18:18:48.2029641Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowDiffs.c -o rowDiffs.o 2021-05-17T18:18:50.0995112Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowLogSumExp.c -o rowLogSumExp.o 2021-05-17T18:18:50.2276872Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMads.c -o rowMads.o 2021-05-17T18:18:51.1629831Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMeans2.c -o rowMeans2.o 2021-05-17T18:18:51.7148016Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowMedians.c -o rowMedians.o 2021-05-17T18:18:52.5494730Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowOrderStats.c -o rowOrderStats.o 2021-05-17T18:18:52.9336591Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanges.c -o rowRanges.o 2021-05-17T18:18:54.3943641Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowRanksWithTies.c -o rowRanksWithTies.o 2021-05-17T18:19:05.7251767Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowSums2.c -o rowSums2.o 2021-05-17T18:19:06.2507937Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rowVars.c -o rowVars.o 2021-05-17T18:19:06.8677451Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signTabulate.c -o signTabulate.o 2021-05-17T18:19:06.9842679Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sum2.c -o sum2.o 2021-05-17T18:19:07.0918559Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c validateIndices.c -o validateIndices.o 2021-05-17T18:19:07.3242896Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMean.c -o weightedMean.o 2021-05-17T18:19:07.4867997Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c weightedMedian.c -o weightedMedian.o 2021-05-17T18:19:07.8866365Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c x_OP_y.c -o x_OP_y.o 2021-05-17T18:19:57.6293495Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o matrixStats.so 000.init.o allocMatrix2.o anyMissing.o binCounts.o binMeans.o colCounts.o colOrderStats.o colRanges.o diff2.o indexByRow.o logSumExp.o mean2.o productExpSumLog.o psortKM.o rowCounts.o rowCummaxs.o rowCummins.o rowCumprods.o rowCumsums.o rowDiffs.o rowLogSumExp.o rowMads.o rowMeans2.o rowMedians.o rowOrderStats.o rowRanges.o rowRanksWithTies.o rowSums2.o rowVars.o signTabulate.o sum2.o validateIndices.o weightedMean.o weightedMedian.o x_OP_y.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:19:57.7163123Z installing to /home/runner/work/_temp/Library/00LOCK-matrixStats/00new/matrixStats/libs 2021-05-17T18:19:57.7290544Z ** R 2021-05-17T18:19:57.7497071Z ** inst 2021-05-17T18:19:57.7542734Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:19:59.0725753Z ** help 2021-05-17T18:19:59.1998831Z *** installing help indices 2021-05-17T18:19:59.2805740Z ** building package indices 2021-05-17T18:19:59.5379594Z ** installing vignettes 2021-05-17T18:19:59.5435356Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:19:59.7217570Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:19:59.7442038Z ** testing if installed package can be loaded from final location 2021-05-17T18:19:59.9366860Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:19:59.9386465Z * DONE (matrixStats) 2021-05-17T18:20:00.1888578Z * installing *source* package ‘htmltools’ ... 2021-05-17T18:20:00.1910093Z ** package ‘htmltools’ successfully unpacked and MD5 sums checked 2021-05-17T18:20:00.1911317Z ** using staged installation 2021-05-17T18:20:00.2054211Z ** libs 2021-05-17T18:20:00.2099347Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o 2021-05-17T18:20:00.2536289Z gcc -I"/opt/R/devel/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c template.c -o template.o 2021-05-17T18:20:00.3559830Z gcc -shared -L/opt/R/devel/lib/R/lib -L/usr/local/lib -o htmltools.so init.o template.o -L/opt/R/devel/lib/R/lib -lR 2021-05-17T18:20:00.3780907Z installing to /home/runner/work/_temp/Library/00LOCK-htmltools/00new/htmltools/libs 2021-05-17T18:20:00.3791303Z ** R 2021-05-17T18:20:00.3916528Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:20:01.7810448Z ** help 2021-05-17T18:20:01.8573361Z *** installing help indices 2021-05-17T18:20:01.9109779Z ** building package indices 2021-05-17T18:20:02.1463839Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:20:02.3410532Z ** checking absolute paths in shared objects and dynamic libraries 2021-05-17T18:20:02.3580493Z ** testing if installed package can be loaded from final location 2021-05-17T18:20:02.5745157Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:20:02.5760783Z * DONE (htmltools) 2021-05-17T18:20:02.7863898Z * installing *source* package ‘spelling’ ... 2021-05-17T18:20:02.7873232Z ** package ‘spelling’ successfully unpacked and MD5 sums checked 2021-05-17T18:20:02.7874342Z ** using staged installation 2021-05-17T18:20:02.8016861Z ** R 2021-05-17T18:20:02.8063624Z ** inst 2021-05-17T18:20:02.8071848Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:20:03.2459582Z ** help 2021-05-17T18:20:03.2655162Z *** installing help indices 2021-05-17T18:20:03.2818445Z ** building package indices 2021-05-17T18:20:03.4688544Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:20:03.6422321Z ** testing if installed package can be loaded from final location 2021-05-17T18:20:03.8136762Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:20:03.8143830Z * DONE (spelling) 2021-05-17T18:20:04.5595519Z * installing *source* package ‘rmarkdown’ ... 2021-05-17T18:20:04.5869342Z ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked 2021-05-17T18:20:04.5870650Z ** using staged installation 2021-05-17T18:20:04.6134611Z ** R 2021-05-17T18:20:04.6496541Z ** inst 2021-05-17T18:20:04.6710312Z ** byte-compile and prepare package for lazy loading 2021-05-17T18:20:07.8396109Z ** help 2021-05-17T18:20:08.0248535Z *** installing help indices 2021-05-17T18:20:08.1719760Z *** copying figures 2021-05-17T18:20:08.1722374Z ** building package indices 2021-05-17T18:20:08.4590042Z ** installing vignettes 2021-05-17T18:20:08.4666303Z ** testing if installed package can be loaded from temporary location 2021-05-17T18:20:08.6997210Z ** testing if installed package can be loaded from final location 2021-05-17T18:20:08.9913279Z ** testing if installed package keeps a record of temporary installation path 2021-05-17T18:20:08.9969909Z * DONE (rmarkdown) 2021-05-17T18:20:09.0131384Z 2021-05-17T18:20:09.0135372Z The downloaded source packages are in 2021-05-17T18:20:09.0136927Z ‘/tmp/RtmpLtHsRr/downloaded_packages’ 2021-05-17T18:20:09.1552307Z Skipping install of 'RNifti' from a github remote, the SHA1 (929106d1) has not changed since last install. 2021-05-17T18:20:09.1553618Z Use `force = TRUE` to force installation 2021-05-17T18:20:22.3595257Z Skipping install of 'rcmdcheck' from a cran remote, the SHA1 (1.3.3) has not changed since last install. 2021-05-17T18:20:22.3596987Z Use `force = TRUE` to force installation 2021-05-17T18:20:22.3606651Z Skipping install of 'markdown' from a cran remote, the SHA1 (1.1) has not changed since last install. 2021-05-17T18:20:22.3607854Z Use `force = TRUE` to force installation 2021-05-17T18:20:22.3711619Z ##[group]Run options(width = 100) 2021-05-17T18:20:22.3712149Z options(width = 100) 2021-05-17T18:20:22.3712713Z pkgs <- installed.packages()[, "Package"] 2021-05-17T18:20:22.3713379Z sessioninfo::session_info(pkgs, include_base = TRUE) 2021-05-17T18:20:22.3720473Z shell: /usr/local/bin/Rscript {0} 2021-05-17T18:20:22.3720882Z env: 2021-05-17T18:20:22.3721310Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:20:22.3721753Z TIC_DEPLOY_KEY: 2021-05-17T18:20:22.3722532Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:20:22.3724141Z GITHUB_PAT: *** 2021-05-17T18:20:22.3724982Z COVERALLS_TOKEN: *** 2021-05-17T18:20:22.3725466Z continue-on-error: true 2021-05-17T18:20:22.3725927Z VDIFFR_RUN_TESTS: 2021-05-17T18:20:22.3726382Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:20:22.3726817Z TZ: UTC 2021-05-17T18:20:22.3727181Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:20:22.3727615Z NOT_CRAN: true 2021-05-17T18:20:22.3727983Z ##[endgroup] 2021-05-17T18:20:22.7864104Z ─ Session info ─────────────────────────────────────────────────────────────────────────────────── 2021-05-17T18:20:22.7865168Z setting value 2021-05-17T18:20:22.7866206Z version R Under development (unstable) (2021-05-15 r80301) 2021-05-17T18:20:22.7866931Z os Ubuntu 20.04.2 LTS 2021-05-17T18:20:22.7867760Z system x86_64, linux-gnu 2021-05-17T18:20:22.7868384Z ui X11 2021-05-17T18:20:22.7868964Z language (EN) 2021-05-17T18:20:22.7869777Z collate C.UTF-8 2021-05-17T18:20:22.7870592Z ctype C.UTF-8 2021-05-17T18:20:22.7871176Z tz UTC 2021-05-17T18:20:22.7871948Z date 2021-05-17 2021-05-17T18:20:22.7872275Z 2021-05-17T18:20:22.7873189Z ─ Packages ─────────────────────────────────────────────────────────────────────────────────────── 2021-05-17T18:20:22.7873994Z package * version date lib source 2021-05-17T18:20:22.7875054Z aghast 0.2.1 2021-05-17 [1] Github (muschellij2/aghast@0c3b853) 2021-05-17T18:20:22.7876046Z askpass 1.1 2019-01-13 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7876931Z base * 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7877835Z base64enc 0.1-3 2015-07-28 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7878722Z boot 1.3-28 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7879586Z brew 1.0-6 2011-04-13 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7880463Z brio 1.1.2 2021-04-23 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7881328Z cachem 1.0.5 2021-05-15 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7882212Z callr 3.7.0 2021-04-20 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7883062Z class 7.3-19 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7883928Z cli 2.5.0 2021-04-26 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7884782Z clipr 0.7.1 2020-10-08 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7885644Z cluster 2.1.2 2021-04-17 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7886549Z codetools 0.2-18 2020-11-04 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7887473Z commonmark 1.7 2018-12-01 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7888531Z compiler 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7889437Z covr 3.5.1 2020-09-16 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7890319Z cpp11 0.2.7 2021-03-29 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7891180Z crayon 1.4.1 2021-02-08 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7892097Z credentials 1.3.0 2020-07-21 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7893012Z curl 4.3.1 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7893883Z datasets * 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7894784Z debugme 1.1.0 2017-10-22 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7895758Z desc 1.2.0.9000 2021-05-17 [1] Github (muschellij2/desc@7be86f2) 2021-05-17T18:20:22.7896715Z devtools 2.4.1 2021-05-05 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7897607Z diffobj 0.3.4 2021-03-22 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7898475Z digest 0.6.27 2020-10-24 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7899628Z dplyr 1.0.6 2021-05-05 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7900520Z ellipsis 0.3.2 2021-04-29 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7901425Z evaluate 0.14 2019-05-28 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7902320Z fansi 0.4.2 2021-01-15 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7903200Z fastmap 1.1.0 2021-01-25 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7904079Z foreign 0.8-81 2020-12-22 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7904947Z fs 1.5.0 2020-07-31 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7905834Z generics 0.1.0 2020-10-31 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7906704Z gert 1.3.0 2021-03-29 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7907570Z gh 1.3.0 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7908560Z ghtravis 0.15.1 2021-05-17 [1] Github (muschellij2/ghtravis@0b26809) 2021-05-17T18:20:22.7909543Z git2r 0.28.0 2021-01-10 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7910423Z gitcreds 0.1.1 2020-12-04 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7911296Z glue 1.4.2 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7912175Z graphics * 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7913081Z grDevices * 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7913958Z grid 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7914829Z highr 0.9 2021-04-16 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7915722Z htmltools 0.5.1.1 2021-01-22 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7916593Z httr 1.4.2 2020-07-20 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7917469Z hunspell 3.0.1 2020-12-09 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7918344Z ini 0.3.1 2018-05-20 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7919205Z jsonlite 1.7.2 2020-12-09 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7920125Z KernSmooth 2.23-20 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7921036Z knitr 1.33 2021-04-24 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7921904Z lattice 0.20-44 2021-05-02 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7922900Z lazyeval 0.2.2 2019-03-15 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7923832Z lifecycle 1.0.0 2021-02-15 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7924730Z magrittr 2.0.1 2020-11-17 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7925619Z markdown 1.1 2019-08-07 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7926484Z MASS 7.3-54 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7927357Z Matrix 1.3-3 2021-05-04 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7928260Z matrixStats 0.58.0 2021-01-29 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7929173Z memoise 2.0.0 2021-01-26 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7930059Z methods * 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7930939Z mgcv 1.8-35 2021-04-18 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7931788Z mime 0.10 2021-02-13 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7932748Z nlme 3.1-152 2021-02-04 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7933607Z nnet 7.3-16 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7934479Z openssl 1.4.4 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7935376Z parallel 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7936273Z pillar 1.6.1 2021-05-16 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7937153Z pkgbuild 1.2.0 2020-12-15 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7938059Z pkgconfig 2.0.3 2019-09-22 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7939097Z pkgload 1.2.1 2021-04-06 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7939983Z praise 1.0.0 2015-08-11 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7940900Z prettyunits 1.1.1 2020-01-24 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7944330Z processx 3.5.2 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7945209Z ps 1.6.0 2021-02-28 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7946066Z purrr 0.3.4 2020-04-17 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7946913Z R6 2.5.0 2020-10-28 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7947795Z rappdirs 0.3.3 2021-01-31 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7948715Z rcmdcheck 1.3.3 2019-05-07 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7949591Z Rcpp 1.0.6 2021-01-15 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7950498Z rematch2 2.1.2 2020-05-01 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7951406Z remotes 2.3.0 2021-04-01 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7952280Z rex 1.2.0 2020-04-21 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7953144Z rlang 0.4.11 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7954027Z rmarkdown 2.8 2021-05-07 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7955052Z RNifti 1.3.1 2021-05-17 [1] Github (neuroconductor/RNifti@929106d) 2021-05-17T18:20:22.7956042Z roxygen2 7.1.1 2020-06-27 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7956923Z rpart 4.1-15 2019-04-12 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7957807Z rprojroot 2.0.2 2020-11-15 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7958837Z rstudioapi 0.13 2020-11-12 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7959758Z rversions 2.0.2 2020-05-25 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7960699Z sessioninfo 1.1.1 2018-11-05 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7961613Z spatial 7.3-14 2021-05-03 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7962496Z spelling 2.2 2020-10-18 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7963432Z splines 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7964196Z stats * 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7964933Z stats4 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7965703Z stringi 1.6.2 2021-05-17 [1] CRAN (R 4.2.0) 2021-05-17T18:20:22.7966473Z stringr 1.4.0 2019-02-10 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7967236Z survival 3.2-11 2021-04-26 [2] CRAN (R 4.2.0) 2021-05-17T18:20:22.7967994Z sys 3.4 2020-07-23 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7968892Z sysreqs 1.0.0.9000 2021-05-17 [1] Github (r-hub/sysreqs@f068afa) 2021-05-17T18:20:22.7969688Z tcltk 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7970457Z testthat 3.0.2 2021-02-14 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7971237Z tibble 3.1.2 2021-05-16 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7972038Z tic 0.10.0 2021-05-17 [1] Github (ropensci/tic@3b4dfb8) 2021-05-17T18:20:22.7972839Z tidyr 1.1.3 2021-03-03 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7973610Z tidyselect 1.1.1 2021-04-30 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7974411Z tinytex 0.31 2021-03-30 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7975167Z tools 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7975923Z usethis 2.0.1 2021-02-10 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7976680Z utf8 1.2.1 2021-03-12 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7977429Z utils * 4.2.0 2021-05-16 [2] local 2021-05-17T18:20:22.7978166Z vctrs 0.3.8 2021-04-29 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7979082Z waldo 0.2.5 2021-03-08 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7979853Z whisker 0.4 2019-08-28 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7980609Z withr 2.4.2 2021-04-18 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7981352Z xfun 0.23 2021-05-15 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7982107Z xml2 1.3.2 2020-04-23 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7982844Z xopen 1.0.0 2018-09-17 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7983597Z yaml 2.2.1 2020-02-01 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7984341Z zip 2.1.1 2020-08-27 [1] RSPM (R 4.2.0) 2021-05-17T18:20:22.7984632Z 2021-05-17T18:20:22.7985082Z [1] /home/runner/work/_temp/Library 2021-05-17T18:20:22.7985610Z [2] /opt/R/devel/lib/R/library 2021-05-17T18:20:22.8014970Z ##[group]Run Rscript -e 'tic::script()' 2021-05-17T18:20:22.8015531Z Rscript -e 'tic::script()' 2021-05-17T18:20:22.8015956Z ls -l check 2021-05-17T18:20:22.8058510Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-17T18:20:22.8059181Z env: 2021-05-17T18:20:22.8059599Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:20:22.8060062Z TIC_DEPLOY_KEY: 2021-05-17T18:20:22.8060827Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:20:22.8062323Z GITHUB_PAT: *** 2021-05-17T18:20:22.8063172Z COVERALLS_TOKEN: *** 2021-05-17T18:20:22.8063652Z continue-on-error: true 2021-05-17T18:20:22.8064099Z VDIFFR_RUN_TESTS: 2021-05-17T18:20:22.8064568Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:20:22.8064989Z TZ: UTC 2021-05-17T18:20:22.8065361Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:20:22.8065772Z NOT_CRAN: true 2021-05-17T18:20:22.8066124Z ##[endgroup] 2021-05-17T18:20:23.0626426Z ✔ Loading tic stage configuration from tic.R 2021-05-17T18:20:23.1882044Z Running script: step_rcmdcheck(warnings_are_errors = NULL, notes_are_errors = NULL, 2021-05-17T18:20:23.1883357Z args = args, build_args = NULL, error_on = error_on, repos = repo_default(), 2021-05-17T18:20:23.1884249Z timeout = Inf, check_dir = "check") 2021-05-17T18:20:23.2454510Z ── R CMD build ───────────────────────────────────────────────────────────────── 2021-05-17T18:20:23.4498889Z * checking for file ‘.../DESCRIPTION’ ... OK 2021-05-17T18:20:23.4626166Z * preparing ‘stapler’: 2021-05-17T18:20:23.4718307Z * checking DESCRIPTION meta-information ... OK 2021-05-17T18:20:23.5539425Z * installing the package to build vignettes 2021-05-17T18:28:24.4597413Z * creating vignettes ... OK 2021-05-17T18:28:24.4893787Z * checking for LF line-endings in source and make files and shell scripts 2021-05-17T18:28:24.4903265Z * checking for empty or unneeded directories 2021-05-17T18:28:24.4962792Z Omitted ‘LazyData’ from DESCRIPTION 2021-05-17T18:28:24.5011435Z * building ‘stapler_0.7.2.tar.gz’ 2021-05-17T18:28:24.5240516Z 2021-05-17T18:28:24.6614490Z ── R CMD check ───────────────────────────────────────────────────────────────── 2021-05-17T18:28:24.8701295Z * using log directory ‘/home/runner/work/stapler/stapler/check/stapler.Rcheck’ 2021-05-17T18:28:24.8702803Z * using R Under development (unstable) (2021-05-15 r80301) 2021-05-17T18:28:24.8708543Z * using platform: x86_64-pc-linux-gnu (64-bit) 2021-05-17T18:28:24.8709616Z * using session charset: UTF-8 2021-05-17T18:28:24.9088471Z * using option ‘--as-cran’ 2021-05-17T18:28:24.9105403Z * checking for file ‘stapler/DESCRIPTION’ ... OK 2021-05-17T18:28:24.9106458Z * checking extension type ... Package 2021-05-17T18:28:24.9107451Z * this is package ‘stapler’ version ‘0.7.2’ 2021-05-17T18:28:24.9108349Z * package encoding: UTF-8 2021-05-17T18:28:24.9124456Z * checking package namespace information ... OK 2021-05-17T18:28:39.4175781Z * checking package dependencies ... OK 2021-05-17T18:28:39.4186992Z * checking if this is a source package ... OK 2021-05-17T18:28:39.4187966Z * checking if there is a namespace ... OK 2021-05-17T18:28:39.6340553Z * checking for executable files ... OK 2021-05-17T18:28:39.6341712Z * checking for hidden files and directories ... OK 2021-05-17T18:28:39.6342630Z * checking for portable file names ... OK 2021-05-17T18:28:39.6344757Z * checking for sufficient/correct file permissions ... OK 2021-05-17T18:28:39.6362494Z * checking serialization versions ... OK 2021-05-17T18:28:41.3071163Z * checking whether package ‘stapler’ can be installed ... OK 2021-05-17T18:28:41.3181977Z * checking installed package size ... OK 2021-05-17T18:28:41.3877962Z * checking package directory ... OK 2021-05-17T18:28:41.3878806Z * checking for future file timestamps ... OK 2021-05-17T18:28:41.3880153Z * checking ‘build’ directory ... OK 2021-05-17T18:28:41.5399407Z * checking DESCRIPTION meta-information ... OK 2021-05-17T18:28:41.5400789Z * checking top-level files ... OK 2021-05-17T18:28:41.5402202Z * checking for left-over files ... OK 2021-05-17T18:28:41.7011304Z * checking index information ... OK 2021-05-17T18:28:41.9260474Z * checking package subdirectories ... OK 2021-05-17T18:28:41.9715913Z * checking R files for non-ASCII characters ... OK 2021-05-17T18:28:42.0189742Z * checking R files for syntax errors ... OK 2021-05-17T18:28:42.2784423Z * checking whether the package can be loaded ... OK 2021-05-17T18:28:42.5196783Z * checking whether the package can be loaded with stated dependencies ... OK 2021-05-17T18:28:42.7648119Z * checking whether the package can be unloaded cleanly ... OK 2021-05-17T18:28:43.0139139Z * checking whether the namespace can be loaded with stated dependencies ... OK 2021-05-17T18:28:43.2716722Z * checking whether the namespace can be unloaded cleanly ... OK 2021-05-17T18:28:43.5402474Z * checking loading without being on the library search path ... OK 2021-05-17T18:28:43.8289218Z * checking dependencies in R code ... OK 2021-05-17T18:28:44.4766008Z * checking S3 generic/method consistency ... OK 2021-05-17T18:28:44.7824155Z * checking replacement functions ... OK 2021-05-17T18:28:45.1287998Z * checking foreign function calls ... OK 2021-05-17T18:28:48.1827445Z * checking R code for possible problems ... OK 2021-05-17T18:28:48.3654619Z * checking Rd files ... OK 2021-05-17T18:28:48.4118771Z * checking Rd metadata ... OK 2021-05-17T18:28:48.4752251Z * checking Rd line widths ... OK 2021-05-17T18:28:48.5673940Z * checking Rd cross-references ... OK 2021-05-17T18:28:48.8605027Z * checking for missing documentation entries ... OK 2021-05-17T18:28:49.7256394Z * checking for code/documentation mismatches ... OK 2021-05-17T18:28:50.4664757Z * checking Rd \usage sections ... OK 2021-05-17T18:28:50.5359966Z * checking Rd contents ... OK 2021-05-17T18:28:50.6420154Z * checking for unstated dependencies in examples ... OK 2021-05-17T18:28:50.6461380Z * checking installed files from ‘inst/doc’ ... OK 2021-05-17T18:28:50.6496339Z * checking files in ‘vignettes’ ... OK 2021-05-17T18:28:59.0685882Z * checking examples ... OK 2021-05-17T18:28:59.1433544Z * checking for unstated dependencies in ‘tests’ ... OK 2021-05-17T18:28:59.3006561Z * checking tests ... 2021-05-17T18:28:59.6943059Z Running ‘spelling.R’ 2021-05-17T18:28:59.6982781Z Comparing ‘spelling.Rout’ to ‘spelling.Rout.save’ ... OK 2021-05-17T18:29:01.6602212Z Running ‘testthat.R’ 2021-05-17T18:29:01.6643242Z OK 2021-05-17T18:29:01.8285945Z * checking for unstated dependencies in vignettes ... OK 2021-05-17T18:29:01.8387864Z * checking package vignettes in ‘inst/doc’ ... OK 2021-05-17T18:36:53.4593660Z * checking re-building of vignette outputs ... OK 2021-05-17T18:36:55.3515940Z * checking PDF version of manual ... OK 2021-05-17T18:36:55.3517739Z * checking for non-standard things in the check directory ... OK 2021-05-17T18:36:55.3518704Z * checking for detritus in the temp directory ... OK 2021-05-17T18:36:55.3519337Z * DONE 2021-05-17T18:36:55.3547088Z 2021-05-17T18:36:55.3547697Z Status: OK 2021-05-17T18:36:55.3548131Z 2021-05-17T18:36:55.4382584Z ── R CMD check results ────────────────────────────────────── stapler 0.7.2 ──── 2021-05-17T18:36:55.4400908Z Duration: 8m 30.9s 2021-05-17T18:36:55.4402412Z 2021-05-17T18:36:55.4414776Z 0 errors ✔ | 0 warnings ✔ | 0 notes ✔ 2021-05-17T18:36:55.4526067Z total 188 2021-05-17T18:36:55.4527183Z drwxr-xr-x 6 runner docker 4096 May 17 18:36 stapler.Rcheck 2021-05-17T18:36:55.4528121Z -rw-r--r-- 1 runner docker 75826 May 17 18:28 stapler_0.7.2.tar.gz 2021-05-17T18:36:55.4529175Z -rw-r--r-- 1 runner docker 109726 May 17 18:28 stapler_0.7.2_R_x86_64-pc-linux-gnu.tar.gz 2021-05-17T18:36:55.4565582Z ##[group]Run find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-17T18:36:55.4566326Z find check -name 'testthat.Rout*' -exec cat '{}' \; || true 2021-05-17T18:36:55.4608611Z shell: /usr/bin/bash --noprofile --norc -e -o pipefail {0} 2021-05-17T18:36:55.4609107Z env: 2021-05-17T18:36:55.4609529Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:36:55.4609985Z TIC_DEPLOY_KEY: 2021-05-17T18:36:55.4610760Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:36:55.4612368Z GITHUB_PAT: *** 2021-05-17T18:36:55.4613127Z COVERALLS_TOKEN: *** 2021-05-17T18:36:55.4613598Z continue-on-error: true 2021-05-17T18:36:55.4614042Z VDIFFR_RUN_TESTS: 2021-05-17T18:36:55.4614510Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:36:55.4614928Z TZ: UTC 2021-05-17T18:36:55.4615300Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:36:55.4615698Z NOT_CRAN: true 2021-05-17T18:36:55.4616045Z ##[endgroup] 2021-05-17T18:36:55.4708439Z 2021-05-17T18:36:55.4710066Z R Under development (unstable) (2021-05-15 r80301) -- "Unsuffered Consequences" 2021-05-17T18:36:55.4711040Z Copyright (C) 2021 The R Foundation for Statistical Computing 2021-05-17T18:36:55.4711884Z Platform: x86_64-pc-linux-gnu (64-bit) 2021-05-17T18:36:55.4712231Z 2021-05-17T18:36:55.4712809Z R is free software and comes with ABSOLUTELY NO WARRANTY. 2021-05-17T18:36:55.4713601Z You are welcome to redistribute it under certain conditions. 2021-05-17T18:36:55.4714555Z Type 'license()' or 'licence()' for distribution details. 2021-05-17T18:36:55.4714960Z 2021-05-17T18:36:55.4715524Z R is a collaborative project with many contributors. 2021-05-17T18:36:55.4716373Z Type 'contributors()' for more information and 2021-05-17T18:36:55.4717258Z 'citation()' on how to cite R or R packages in publications. 2021-05-17T18:36:55.4717665Z 2021-05-17T18:36:55.4718343Z Type 'demo()' for some demos, 'help()' for on-line help, or 2021-05-17T18:36:55.4719401Z 'help.start()' for an HTML browser interface to help. 2021-05-17T18:36:55.4720071Z Type 'q()' to quit R. 2021-05-17T18:36:55.4720322Z 2021-05-17T18:36:55.4720703Z > library(testthat) 2021-05-17T18:36:55.4721145Z > library(stapler) 2021-05-17T18:36:55.4721491Z > 2021-05-17T18:36:55.4721886Z > test_check("stapler") 2021-05-17T18:36:55.4722702Z ══ Warnings ════════════════════════════════════════════════════════════════════ 2021-05-17T18:36:55.4723657Z ── Warning (test-binmat-bad.R:26:3): Staple binary matrix ────────────────────── 2021-05-17T18:36:55.4724559Z Dropping values where all the same - may be wrong! 2021-05-17T18:36:55.4725069Z Backtrace: 2021-05-17T18:36:55.4726151Z 1. testthat::expect_message(...) test-binmat-bad.R:26:2 2021-05-17T18:36:55.4727320Z 6. stapler::staple_bin_mat(x, drop_all_same = TRUE) test-binmat-bad.R:26:28 2021-05-17T18:36:55.4728405Z ── Warning (test-binmat-bad.R:62:3): Staple binary matrix ────────────────────── 2021-05-17T18:36:55.4729302Z Dropping values where all the same - may be wrong! 2021-05-17T18:36:55.4729820Z Backtrace: 2021-05-17T18:36:55.4730719Z 1. testthat::expect_message(...) test-binmat-bad.R:62:2 2021-05-17T18:36:55.4731877Z 6. stapler::staple_multi_mat(x, drop_all_same = TRUE) test-binmat-bad.R:63:4 2021-05-17T18:36:55.4732357Z 2021-05-17T18:36:55.4732769Z [ FAIL 0 | WARN 2 | SKIP 0 | PASS 22 ] 2021-05-17T18:36:55.4733148Z > 2021-05-17T18:36:55.4733492Z > proc.time() 2021-05-17T18:36:55.4733992Z user system elapsed 2021-05-17T18:36:55.4734413Z 1.877 0.065 1.933 2021-05-17T18:36:55.4769853Z ##[group]Run Rscript -e "tic::before_deploy()" 2021-05-17T18:36:55.4770424Z Rscript -e "tic::before_deploy()" 2021-05-17T18:36:55.4811021Z shell: /usr/bin/bash -e {0} 2021-05-17T18:36:55.4811388Z env: 2021-05-17T18:36:55.4811817Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:36:55.4812260Z TIC_DEPLOY_KEY: 2021-05-17T18:36:55.4813035Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:36:55.4814261Z GITHUB_PAT: *** 2021-05-17T18:36:55.4815011Z COVERALLS_TOKEN: *** 2021-05-17T18:36:55.4815484Z continue-on-error: true 2021-05-17T18:36:55.4815941Z VDIFFR_RUN_TESTS: 2021-05-17T18:36:55.4816396Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:36:55.4816829Z TZ: UTC 2021-05-17T18:36:55.4817189Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:36:55.4817585Z NOT_CRAN: true 2021-05-17T18:36:55.4817947Z ##[endgroup] 2021-05-17T18:36:55.7361500Z ✔ Loading tic stage configuration from tic.R 2021-05-17T18:36:55.8585661Z ##[group]Run actions/upload-release-asset@v1.0.1 2021-05-17T18:36:55.8586204Z with: 2021-05-17T18:36:55.8587004Z upload_url: https://uploads.github.com/repos/neuroconductor/stapler/releases/43077838/assets{?name,label} 2021-05-17T18:36:55.8588008Z asset_path: check/stapler_0.7.2_R_x86_64-pc-linux-gnu.tar.gz 2021-05-17T18:36:55.8588675Z asset_name: stapler_0.7.2_R_x86_64-pc-linux-gnu_R4.1.tar.gz 2021-05-17T18:36:55.8589317Z asset_content_type: application/octet-stream 2021-05-17T18:36:55.8589921Z env: 2021-05-17T18:36:55.8590334Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:36:55.8590793Z TIC_DEPLOY_KEY: 2021-05-17T18:36:55.8591565Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:36:55.8592991Z GITHUB_PAT: *** 2021-05-17T18:36:55.8593869Z COVERALLS_TOKEN: *** 2021-05-17T18:36:55.8594347Z continue-on-error: true 2021-05-17T18:36:55.8594791Z VDIFFR_RUN_TESTS: 2021-05-17T18:36:55.8595280Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:36:55.8595712Z TZ: UTC 2021-05-17T18:36:55.8596080Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:36:55.8596489Z NOT_CRAN: true 2021-05-17T18:36:55.8597313Z GITHUB_TOKEN: *** 2021-05-17T18:36:55.8597675Z ##[endgroup] 2021-05-17T18:36:56.3907187Z ##[group]Run Rscript -e "tic::deploy()" 2021-05-17T18:36:56.3907737Z Rscript -e "tic::deploy()" 2021-05-17T18:36:56.3950477Z shell: /usr/bin/bash -e {0} 2021-05-17T18:36:56.3950872Z env: 2021-05-17T18:36:56.3951305Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:36:56.3951792Z TIC_DEPLOY_KEY: 2021-05-17T18:36:56.3952577Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:36:56.3954190Z GITHUB_PAT: *** 2021-05-17T18:36:56.3955025Z COVERALLS_TOKEN: *** 2021-05-17T18:36:56.3955508Z continue-on-error: true 2021-05-17T18:36:56.3955961Z VDIFFR_RUN_TESTS: 2021-05-17T18:36:56.3956435Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:36:56.3956859Z TZ: UTC 2021-05-17T18:36:56.3957249Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:36:56.3957655Z NOT_CRAN: true 2021-05-17T18:36:56.3958008Z ##[endgroup] 2021-05-17T18:36:56.6460523Z ✔ Loading tic stage configuration from tic.R 2021-05-17T18:36:56.7591697Z ##[group]Run Rscript -e "tic::after_deploy()" 2021-05-17T18:36:56.7592277Z Rscript -e "tic::after_deploy()" 2021-05-17T18:36:56.7646378Z shell: /usr/bin/bash -e {0} 2021-05-17T18:36:56.7646765Z env: 2021-05-17T18:36:56.7647203Z R_REMOTES_NO_ERRORS_FROM_WARNINGS: true 2021-05-17T18:36:56.7647669Z TIC_DEPLOY_KEY: 2021-05-17T18:36:56.7648447Z RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest 2021-05-17T18:36:56.7649815Z GITHUB_PAT: *** 2021-05-17T18:36:56.7650574Z COVERALLS_TOKEN: *** 2021-05-17T18:36:56.7651052Z continue-on-error: true 2021-05-17T18:36:56.7651515Z VDIFFR_RUN_TESTS: 2021-05-17T18:36:56.7651966Z R_LIBS_USER: /home/runner/work/_temp/Library 2021-05-17T18:36:56.7652395Z TZ: UTC 2021-05-17T18:36:56.7652760Z _R_CHECK_SYSTEM_CLOCK_: FALSE 2021-05-17T18:36:56.7653162Z NOT_CRAN: true 2021-05-17T18:36:56.7653528Z ##[endgroup] 2021-05-17T18:36:57.0227305Z ✔ Loading tic stage configuration from tic.R 2021-05-17T18:36:57.2963678Z Post job cleanup. 2021-05-17T18:36:57.3370183Z [warning]Event Validation Error: The event type workflow_dispatch is not supported. Only push, pull_request events are supported at this time. 2021-05-17T18:36:57.3452385Z Post job cleanup. 2021-05-17T18:36:57.4371372Z [command]/usr/bin/git version 2021-05-17T18:36:57.4426632Z git version 2.31.1 2021-05-17T18:36:57.4460346Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand 2021-05-17T18:36:57.4500656Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || : 2021-05-17T18:36:57.4728603Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader 2021-05-17T18:36:57.4761062Z http.https://github.com/.extraheader 2021-05-17T18:36:57.4769856Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader 2021-05-17T18:36:57.4806607Z [command]/usr/bin/git submodule foreach --recursive git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || : 2021-05-17T18:36:57.5063805Z Cleaning up orphan processes